Gene CNA06200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA06200 
Symbol 
ID3253666 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp1676687 
End bp1677843 
Gene Length1157 bp 
Protein Length263 aa 
Translation table 
GC content52% 
IMG OID638252941 
Productconserved hypothetical protein 
Protein accessionXP_567206 
Protein GI58259587 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1471] Ribosomal protein S4E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGTA AAATATCCAC TACATTCGAC AGCGACGTTT AGGAAGCGAC AGATTGAGGA 
AGGGAGGACA ATGCAAAGCG CAAAATCGGA GAAGAAAGCA GGAAGAAGGG ATTAGAAGGA 
TCTGGAGAAA TATGCGCTAA CTTCAGCGCT GTAGGGTCGA GGTCCTAAGA AGCACCTGAA 
GCGATTGGCA GCTCCCTCCT CATGGATGTT GGACAAGTTG GGCGGCACCT ACGTGAGTTG 
CTGCTTGCGT ATCACACCGA GGCACATCAA TTTTCTAACC GCACAACAAT TTTAGGCCCC 
CCGTCCTTCT CCTGGTCCCC ACAAGCTCAG GGAGTCTCTT CCCCTTACTG TCTTCCTCCG 
AAACCGTCTG AAGTACGCTC TCACTGGCCG TGAGGTCACT GCTATTGTTA AGCAGCGACT 
CATCAAGGTC GACGGCAAGG TCAGGACTGA TGAGACCTTC CCCGCTGGTT TCATGGGTAG 
GTGAAGATGG AGCTTTGAAA ATTGTTACTG GCTAATCATG ACCCATAGAT GTTATCTCCA 
TCGAGCGATC TGGCGAGCAC TTCCGTCTCC TCTACGACGT CAAGGGTCGA TTCACCATTC 
ACCGAATCAC CCCCGAGGAG GCCACTTTCA AGCTCCTTAA GGTTCGAAAG CATCAGCTTG 
GTGCCAAGGG CGTTCCCCAC ATCGTTACCC ACGATGGCCG AACCATCCGA TACCCCGACC 
CTGCCATCAA GGTCAACGAC ACTGTCAAGT TCGACTTCGT TCAGAACAAA ATCGTTGACC 
ACATCAAGTT TGAGCCCGGA AACGTCGTCA TGGTTACTGG CGGTCGTAAC ATGGGTCGAT 
CTGGTGTGAT CGTTCACAAG GAGAGGCACT TGGGTGGTTT CGACATTGTT CACGTCAAGG 
ACGTGTTGGA CAGGACCTTT GCTACTAGGT GAGTTGGCCA AATGTGCTTA TTGGGCAATG 
GCTGACTGGA AATGCATAGG CTTTCCAACA TTTTCGTCAT TGGTGAGGGT TCCAAGGCCC 
AGGTGTCTTT GCCCAAGGGC AAGGGTGTCA AGCTCTCTAT CGCCGAGGAG CGTGACCAAA 
GGAGGCGCCA GCGGGCTCAG GAGGCTTAAG GTGTATAGGG AGGCTTGTAT TTCGGTGATG 
CAGACTCTTT CATGGCT
 
Protein sequence
MGRGPKKHLK RLAAPSSWML DKLGGTYAPR PSPGPHKLRE SLPLTVFLRN RLKYALTGRE 
VTAIVKQRLI KVDGKVRTDE TFPAGFMDVI SIERSGEHFR LLYDVKGRFT IHRITPEEAT 
FKLLKVRKHQ LGAKGVPHIV THDGRTIRYP DPAIKVNDTV KFDFVQNKIV DHIKFEPGNV 
VMVTGGRNMG RSGVIVHKER HLGGFDIVHV KDVLDRTFAT RLSNIFVIGE GSKAQVSLPK 
GKGVKLSIAE ERDQRRRQRA QEA