Gene CNA06040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA06040 
Symbol 
ID3253838 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand- 
Start bp1615915 
End bp1617168 
Gene Length1254 bp 
Protein Length283 aa 
Translation table 
GC content46% 
IMG OID638252925 
Productconserved hypothetical protein 
Protein accessionXP_566958 
Protein GI58259091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.373954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAT CCGATTTTGA ACGGCTGGCT GAGTGGAGGA CACTCGGTGC GAGACATTCT 
GAAGAGACTG TACAGCTCGC TAAGCGAGTC TTGTTAAGCG GTAATGCTGG AGATCAAGGT 
GAAGACTAAA TCGTGTTTGT GCTGTTGTTC CGGGCTGATA GCATCTTTCA GAATGGGCCA 
TCAGGGAACA ACTCGCCATC GCTGCTCTTG ATCTGGGTCA GACATTGTTA GCCTCAGTAA 
GCATCCCCGG CTGTTCCAGA AAATATGCCA GGGTCTAATG AATCATTTGT AGGAGCAAAT 
TGAGACGCTG TATGGGAAGT TTCCTGGCTC ACCTCGAGTG CGGATTCTGG ATGGGTTGAA 
ATTTGAGGCC GATGGAGACG TCTCGCGGGC TAGGGCGGTA TATGAGGCCC TTTTGAAGGA 
GGACGAGACA AACATTGTGA GTACCCCATA GTGCAAGCAG ACTACATATC TGATGTCTTC 
GTTTGTTCAC ATAGACTGCC CATCAACGTA TCATATCTCT TGCTCTCCCA TCCCTTTCCG 
CTATTCCTCT GCTCCTCTCT TATCTTGATG TTTTCTATTC CGATCCCGCC GCTTGGTCAT 
TATTGGCAGA TTTGTACTCC GAACAAGGTC TTTATTCTCA AGCACTCGGT GCTTTGGGAC 
ATTTATCCGT CATAAATAGC TGGGATGACG GTGTAGTCAG ACGTTGCGGT GAAGTGGCGT 
ATACTTTGGG GTGAGTTTTA TATATTGTGT ACATACGTGC CATATCTAAC TAGGATATCA 
CAGGGATTAT CATTTGGCTT TGAAGCATTT CCTTAGAGCA TCCGAAATGC AAGGCGGCAA 
GGAAACTAAT GTGAACACGC GTCGTACAAG AACGTGGTGG GGAATCAAGT TGGTACGTCC 
CAATATCTGC CAGTTTGTAT CCAATGGACT CATTCGACTT AATACAAGGC TATTCAACGG 
TTATTGGACT CTCCAAACTT AGAGACTTCT GTTCCCGCGG ATCTTCAAAC GTCTGAAAAA 
CATTTGCGAC TGTTGGATGA GCTGGCGACA GAGCGGCTAT TAGACGCAGG AGGCCAAGGA 
CTTGACGTGC GTCGGAAAGT CCTCGGCGAG AAAGCTTTGA GACGATGATA GAAAATCCTT 
CAATCATTTT TTAAGGGAAG TAAAAGTTGG AAGTCCTGAT GTGATATACA TACATGTAGT 
TCATATATAG GTTATGAAGG TTGCATAATC AACCAATGTA TATGGATGGA GCTT
 
Protein sequence
MPKSDFERLA EWRTLGARHS EETVQLAKRV LLSGNAGDQE WAIREQLAIA ALDLGQTLLA 
SEQIETLYGK FPGSPRVRIL DGLKFEADGD VSRARAVYEA LLKEDETNIT AHQRIISLAL 
PSLSAIPLLL SYLDVFYSDP AAWSLLADLY SEQGLYSQAL GALGHLSVIN SWDDGVVRRC 
GEVAYTLGDY HLALKHFLRA SEMQGGKETN VNTRRTRTWW GIKLAIQRLL DSPNLETSVP 
ADLQTSEKHL RLLDELATER LLDAGGQGLD VRRKVLGEKA LRR