Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA05880 |
Symbol | |
ID | 3253730 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 1570469 |
End bp | 1572113 |
Gene Length | 1645 bp |
Protein Length | 344 aa |
Translation table | |
GC content | 47% |
IMG OID | 638252908 |
Product | cytoplasm protein, putative |
Protein accession | XP_567203 |
Protein GI | 58259581 |
COG category | [R] General function prediction only |
COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.356849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACTGCACTTT GCATTATATA AACCCAAAGA CAGAATCCAC TACCATCTTT CCCGTTCGTC ACTCAAATCG CCATTGTACA TAGACAAGTA CTATATACAA CTAAACCAAC CGACCTCAAT TGTACAATGA CCAGCCCTCA GAAAAACGTC CAAATCATCT TGAACGAGCG CCCCCAGAAG GGCCCAGTGA CGGATACTAC TTTCAAGTCT AAGACCGTTG ATGTCCCAGA GCTCAAGGAC GGAGAGATCC TCGCCAGGGT TGACTATGCT AGCGTTGTAA GTTATGTTAC CTGGCCAATA CCAAGCATTA GTCTGTCGCT GACTTCCCTG TCTTTGCAAC ACTCAGGATC CCACAATGCG AGGTTGGATA AACGAGGGCC GTTCCTACAT GCCACCAGTG GAAATTGGGG CAGCAATGCG AGCAAATGGT CTCGGCACTG TCATTGCCTC CAAAGCTAAG GATTTCAAGG CTGGTGACAA GGTAAGACGT TGTTCCCGGC GAATGTTTCG AGCCTGTTGA CCACGAGCTT AGGTGCTTGG CCTTTTGAAC TGGCAAGAGT ATTACGTTGG CCCCACTGAA GGCCTTACAA AAAGAGAGTG GGTAATATAC TTAGTTCTTA TGGTGAGCGC TGATGAAATC ACCAGGACGC CTGAGGGAGC TAGGGACGTT GACCACCTTG GTCTTTTCGG CATGACCGGT TTAACCGCCT ACTTTGTGAG TATTGAAATC CTTGACATTT GTAATTTTTC TAAAAGTAGC ATACTCATGT TTGCGCTCCT AGGGTATGAT CGAAGTTGGC AAGGTTAAGG ATGGAGATCA TGTCGTTATC TCTGGTGCCG CTGGCGCAGT CGGTCTAGTC AGTTATGTTT CAGTTACCCA TTAAGTCATT GTTAATAGGC CGACTTAAAT TACGATCATA GGTCGCAACA CAAATCGCTC TAGCCCACCC CAATTGCAAG GTTACCGTCA TTGCCGGCTC GAAAGAAAAG CTTGATTATC TGAAGAAGCT CGGAGCTCAT AACGCCCTCA ACTACAAAGA TGATGACTTC AAGGAACAAT TCAAGAAAGT TGGTCTCATT GACGTCTACT TTGACAACGG TGAGTCACAT CACTCAAGGT CCAAAATTGC CAATAACACT TCTCAGTCGG CGGTAAAATC CTCGACATGG CCCTTGCCCA GCTCAACCCA TTCGCCCGAA TCGTTGCATG CGGTGCTATT TCCCAGTACA AGTGAGTACT ACCATGATGA CCCAAAAAAC TGGTGTCTAA TTCATTGTCA TCAGTGCCAC CGTCCCCGAC CCCATCTATA ACTATTTCAA CATCATTTCC ATGAAGGCCA CTATGCGAGG ATTCATTGTT TTCCAATTCG CTGACCGCTT TCCGGAGGGT ATTAAGTATC TTTCCGACCT TGTCAAGAAG GGCAAGATGG AGTTCAACTA TCATATCATT GATGGGTTGG ACAGTTGCGT GCAGGCGTTG AGGGAGATGT TTGAGGGGAA AAACCTGGGC AAAACCGTTG TTCGAGTTTC AAACGAAGCT GCCAAAGGCA GTAAGCTCTA AAATATAGGA AGCTGGTGTC TGTTTGGTTC AGTCTCGATG CACCAGTAGG GCGCAGTATA TATCATCAGT ATGAATAAAT TGGAT
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Protein sequence | MTSPQKNVQI ILNERPQKGP VTDTTFKSKT VDVPELKDGE ILARVDYASV DPTMRGWINE GRSYMPPVEI GAAMRANGLG TVIASKAKDF KAGDKVLGLL NWQEYYVGPT EGLTKRETPE GARDVDHLGL FGMTGLTAYF GMIEVGKVKD GDHVVISGAA GAVGLVATQI ALAHPNCKVT VIAGSKEKLD YLKKLGAHNA LNYKDDDFKE QFKKVGLIDV YFDNVGGKIL DMALAQLNPF ARIVACGAIS QYNATVPDPI YNYFNIISMK ATMRGFIVFQ FADRFPEGIK YLSDLVKKGK MEFNYHIIDG LDSCVQALRE MFEGKNLGKT VVRVSNEAAK GSKL
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