| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA05760 |
|---|
| Symbol | |
|---|
| ID | 3253237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 1542486 |
|---|
| End bp | 1545430 |
|---|
| Gene Length | 2945 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638252895 |
|---|
| Product | lipid particle protein, putative |
|---|
| Protein accession | XP_566896 |
|---|
| Protein GI | 58258967 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATCACCATT ATCACCTCCA ACCGTTGGGC CACCCTTACA CAGACTGTGC CATTGGGAAC
GACAGACATC CCGGCACGTC TTTTGTGCTC ACTACGCCGG TTGCTCTTTA TAACCACGAC
GCAGCAGTGC GATAGATACT TTTTAACACG AAACTCTATT TCTTCTTCTT TTCTTCCTCT
AACGCTCGAC CAATATTGAG CAGGGGCAAG GGATCTAGCA GTCTCCTAAA GCACTGCAAG
ACACCAAGTA ACTCTTCTAT TTGTCGCTGG CAGTCAATCC TGATTTCGAA CAAGTGGTGA
GGTCTCGTCC CTCACAGTCG ATGCCCCTGC ATAGCTCCGA AGTGCAGCAA GCATCGGGTG
GGAAATTATC ATACATCATT GGTATCTCCG CCTGAGCCAT CCCGCTACTT TTGCCTTCTT
TTTTGACATA ACTTATCGCA GTAAGTAAAC AACCAGTACT GGTTCAACCG TGGGATAAAC
AACATTACGG CATTCTCAAA GCGCGGCCCC GCTAACCCTG CACCTCAGCA AAATGACATC
CCTAATTCCT TCTCCAACAT CTTTTCTCAA CGCAACAGCA GCCCTCATCG CTCCCAGTCC
TATCACCAAG TCTCGATCAC CACTTACACC TACAGAAGGC GCTCCGCTGT CTGGTGACGC
TGCATTAATA CCTAATAAGT ATCTCAGCGA GAAACGCGAC GAAGACACAG GGTATCCACC
GTCCCCTTTG AAAACCGCGA GTCAAGCCCA AACAACCTCT TTGAATCCCC ATCCATCCCG
GTCTGTGCCC TCAGAAATCC CCTCGCTCGT ACGAAGTCCC CCTTCAACAT TGCTGGATGC
CCCAGCACGA GCAGCAATGA GTCTGCCCAA CTGCCAAACT GCTGCCGCCC AGGCCCGAGC
AGTGAGAGGC GGAGAGGTCA AGACGCCAGA ATATGAAGTG GACGAGGATG TATATTCGAG
AGCAGAAGAT GTGCCTCTTT TGGCACCAAT CCCATTACGG CCAAGCCTGT CGCGTGCTTC
CTCTGCCGCG TCTACCGCTT CAAACAGAGG TATCTTGAGG CGAATATTTA TAGACCGGTC
GACGACTCCC TCACAACACC TCACCCGGCC GACCTTCCCG CCTCCATCAT TATCAACGTA
TTCGCCTATG TCTCCCGCTC CTCTTTCACT CTGGGCAAAA CTCAATTTGC TGTTCATCCA
AACTACGTCA ATTATATTAT CGACCTACTT TCTTGTTCTT GTCGTGCTGT GGGCGGTTGC
TGCGGAAGTG GCAAAATGTT TACCAAAATG GATTTGGCCA GAGAGACCAA GGAAGTTTCC
ATGGGATGAT GAGGAATATT GGAAAAAGGA GGGAAAGACG GTCAGTAAAG ATCCCGCGTT
TTATGCAAAG CAAGTGGGGA TGGACATTGA GCATCAGACT GTGGAGACGG AAGATGGCTA
TTATTTAAAG TGAGTTTACC TTTTGAAACC TGCGCTAACC GATAGGATGC ACCGTGTTAT
CGATCCCGAC GCCCAAACAC ACTCTGACGG TCGAGGCGGT TTCCCCGTCC TTATCCTTCA
CGGTCTATTT CAATCCTCGG GGTCATTTGT CACATCTGAA GACCGATCTC TTGCGTTCTG
GTTAGCCAGA GAGGGGAAGT ATCAGGTCTA TCTTGGAAAT ACAAGAGGAG TGTTCGATAT
GGGCCACCGA ACCTTCAGCC GGAACGACCC GAGATTCTGG GGTAAGTCTA AACAGTTTGT
GATTAAAGCT GACCTGTACA AGACTGGACG ATTAGAGAAC TTGCAATGTA CGACCTCCCT
GCGCTCGTTG AACACGTCTG TCGAGAAACT GGGTACGACA AGATTGCATT CATCGGCCAT
TCTCAAGGCA ACGGTCTCGC GTTCATCTCT CTCTCCCTCG GAATGTGCCC CTCCCTCGGC
TCAAAGCTTT CTGTATTCAT CGCGCTCGCC CCCGCCGTGT ATGCGGGGAC TCTCACTACC
GGGTTCCCAT TCACAACGCT AAACAAGATG GATTGGCCGA CGTGGAAAAG GTTTTTCGGT
GTACTCGATT TCATACCGCT AATGAGGTGG GCATACGACT ATGCTCCGCC GAGTATGTTT
GCGTCGCTGG GTTACATTAT GTTTGCGTTT TTGTTCAGCT GGACGGATAC CAACTGGTGC
GTGGGGAAAT GACTATGTAA TCCCACTAGC CTGAAGGAAC TAATCAAACT TGTATATATA
GGCTTCATCG GCGCAAAACG AAAATGTTCC GCTTTACACC TACCCCCGTC TCCTCCGCCT
CCATCTTCTG GTGGTGCGGC AAAGGCGGTT TTGCCGACCG TAAATGCACT TTGGATGACT
CCCTCCCACG ATGGTTCGAC AAGCGTTTCC CTGCACTGTC AATATACCAT GGTGGAAGGG
ATTTTTTGGT TTTTGCCGAT CCGTTGTTGG AGAGGCTGAA GGAGAAGGAG AAGGATGTGA
AGGTGATCAA GGTGACAAAG CTGGAGGATA GTGAGCACTG TGATTTCTAT TGGGCGGCCG
AGGCGGTTGA GTGGGCGTAC TTGTCGTTTT TGGGTGAGTC CCGGTTTCTC TAACTGCTCT
TGATCTTTTC TCTTTACTTC TGCCACACCA TTTTTGTCGT CGCAGACTAC AGAAAAACTG
ACTACCAATG TCCAATCTAG ATGATATCGA GAGCACAAGA CCACGATATC CGGATGAACC
CGAAGCTCCC AAGGGTGGGA CAGAGACTAA CATGTCTTAA GCACGGTTAG CCATTCACAT
GAGCGCGGGA AGCAGATTAT GGATTGCAAG TAACATTGAT GGCCTTAGAA GGTCATAAGC
GATCAGAGAA ACCATGAGCG ATTAGAGAAA GAGGGTCCTA CGAGAAAAGA TATACACGAG
TGTGAAATGA GCGAAAACAG TTGTTCCTGC ATGTCTTTCT AGTGTTGTTT TTACATGATC
TAAAG
|
|---|
| Protein sequence | MTSLIPSPTS FLNATAALIA PSPITKSRSP LTPTEGAPLS GDAALIPNKY LSEKRDEDTG
YPPSPLKTAS QAQTTSLNPH PSRSVPSEIP SLVRSPPSTL LDAPARAAMS LPNCQTAAAQ
ARAVRGGEVK TPEYEVDEDV YSRAEDVPLL APIPLRPSLS RASSAASTAS NRGILRRIFI
DRSTTPSQHL TRPTFPPPSL STYSPMSPAP LSLWAKLNLL FIQTTSIILS TYFLVLVVLW
AVAAEVAKCL PKWIWPERPR KFPWDDEEYW KKEGKTVSKD PAFYAKQVGM DIEHQTVETE
DGYYLKMHRV IDPDAQTHSD GRGGFPVLIL HGLFQSSGSF VTSEDRSLAF WLAREGKYQV
YLGNTRGVFD MGHRTFSRND PRFWDWTIRE LAMYDLPALV EHVCRETGYD KIAFIGHSQG
NGLAFISLSL GMCPSLGSKL SVFIALAPAV YAGTLTTGFP FTTLNKMDWP TWKRFFGVLD
FIPLMRWAYD YAPPSMFASL GYIMFAFLFS WTDTNWLHRR KTKMFRFTPT PVSSASIFWW
CGKGGFADRK CTLDDSLPRW FDKRFPALSI YHGGRDFLVF ADPLLERLKE KEKDVKVIKV
TKLEDSEHCD FYWAAEAVEW AYLSFLDDIE STRPRYPDEP EAPKGGTETN MS
|
|---|
| |