| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA05570 |
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| Symbol | |
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| ID | 3253270 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 1489282 |
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| End bp | 1492583 |
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| Gene Length | 3302 bp |
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| Protein Length | 799 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638252876 |
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| Product | general RNA polymerase II transcription factor, putative |
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| Protein accession | XP_566880 |
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| Protein GI | 58258935 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR00604] DNA repair helicase (rad3) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.946623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGTCTTACC CTATTACAGC ACGCTAAACA TGAAGTTTAT GCTTGGCGAT CTTCCCGTTC
TGTTCCCTTA TGATCGGTAT GTCGTCTCTT ACCACAACCC TCGCAGCGGT CAACGTCATA
CAAGTAGCCA CAGTAACTGA CAACATTTGC CTCAGGCTGT ATCCCGGTCT GTATCTTGGC
CAGTTATTGG GGGTTCAAAG CTTACATGGC CCATCGCAGA GCAATACTCC TACATGGCTG
ACCTGAAAAC AACATTGGAC GCAGGAGTAA GTCAGGTTGC CACTTCTTTC GAGAAGACCA
TTTGACACAG TGGCACGAAT AGGGACATTG TGTACTTGAA ATGCCCTCGG GAACAGGAAA
AACCGTATCC CTGCTATCTC TGATCATTGC CTATATGCAA GTAGGTATAT AGCAGCTGGT
TGACCGAATG ACACCTACTC ATATATCTCA CTATGTAGTT TTACCCTAAT AAACGGAAAC
TGATTTACTG CTCACGGACA GTTCCGGAAA TAGAGAAGGC TTTAGCGGAA CTCAAGCGAT
TGATGATGTA CCGCGCAGAG ATGGGGGCAA ATGATGGTGA TTTCAGAGGA CTGGGATTGA
CGAGTCGGCG GAATCTTTGT CTTCACCCGG AAGTCAGTGT TGAATGTCTG TCTGATTAGC
AAAAGGCTCA CAGACTTAAC AGGTCAGCAA AGAGAAAAAA GGCAAAATAG TTGATTCGCG
GTGCAGGGAT CTCACCTCAG CGTTCGCTTG TGAAAAAGGG AGGGCTGACC CGGGGAGCGT
ACCATTATGT AGTTTCCATG AGGTATGTTC CCTCAGTGAC TGACCTTAGG GCTGACAGAT
GTGCTCAGGA GTTGAACAAT TACGAGCCCG GGAATCTTAT ACCCCCAGGC GTCTATACTC
TGGATGATGT TAAGAAGTAT GGCCAAGAAA AGGGTGTCTG TCCGTACTTT ACGATCAGAA
GAATGGTGAG TAGAGTTCAT AGTGCAACGC TCCTAAGGCT AATTATCAGA AATGAAGTTG
CCTTTCCTCG ACGTTATGAT ATACTCCTTC CATTATCTTC TGGATCCAAA GGTCGCAGAG
CAGGTGTCCG CTGAAATGAG CAAGGAGAGC ATTGTGATAT TTGATGAAGC ACACAACATT
GGTTAGGATC TATGTTGAGA TAGCCGATTT GCGGATTAAT ACTTACATTG CGTTCAGATA
ATGTCTGTAT CGAGTCCCTA TCCATCGACT TGACGAGGCC AATGTTGGAT TCGGCCGCAA
GAAGCGTCAA TAAACTTAGT GACAAGATTG CGGAAATCAA GGAGACTGAT GCGAAGAAGC
TGGAGGATGA GTACGCAAAA CTAGTCGAAG GTCTGCAAGA AGCCAACGAG CGAGTGGAAG
ATGACGACAT GCTCGTCAGT CCGGTTCTGT CAAAAGACAT GGTGGATGAA GCTATACCTG
GGAACATTCG AAAGGCGGAG CATTTTATAG CTTTCCTCAA ACGATTCATT GAATATCTCA
AGGTAATGAT ACCCTAGAAC GAACAGGCAG GACTGACTTC CACAGACTAG GATGCGCGTG
CTGCATGTTG TAGCAGAGAC ACCTCAATCA TTCCTAGCGC ATCTGAAAGA AATAACATAT
ATTGATCAAC GGCCTCTCAA GTAAGTGGTG ATTTAGTTAA CATCTTATGC AGTGTGGCTT
ATGTTGCTTA TCCAGATTTG CTTCCGAGCG CCTTACTTGT TTGGTTCGCA CATTGGAATT
GACAAACTTG GAAGAACATT CTGCGCTGCA AAAGGTTGCT GGTTTTGGGA CCCTTGTTGC
CACTTACGAA AAAGGATTCC TACTGATCCT CGAGCCTTAC GAAACCGAGC ACGCCACAGT
GCCTAACCCC ATTTTTCATT TCACGTAAGT TCATCATGAA GGACAACCAA AACAAGGCGC
TAAATTTACC ACAGTTGTCT TGACCCATCG CTCGCTATAG CGCCCGTCTT TGACCGTTTT
GCCTCAGTGG TCATCACTTC CGGTACCATA TCTCCCCTCG ACATGTACCC CAAAATGTTA
CAATTCCAAC CTGTTATGGA ACAGTCGTAT CCTATGACCC TCACCCGAAA CGCTTTTTTA
CCAATGGTTA TAACTCGAGG CAGTGATCAA GTCCCAATTT CCTCCAGATT TGAGGTTAGA
AATGATCCTG CAGTCGTACG AAATTTTGGA AGCATCTTGA TTGAAATGGC ACGGACTGTC
CCTGATGGAG TGGTGGCATT CTTTCCCAGT TATCTATATA TGGAATCTAT TGTTTCAGCT
TGGTATGACA TGGTGAGGAT GTTTCTTATC ATTTTACCTT GAAAACTGAA AGCACTGCAT
ATAGGGCATT CTAAGTGAGG TGTGGAAGCA TAAGCTACTG TTCGTGGAAA CTCCAGACGC
CATGGAAACG AGCATAGCCC TCAGGAATTA TCGCGAGGCA TGTAATAATG GAAGAGGGGC
TGTCCTTCTC TCTGTGGCGC GAGGAAAGGT GTCCGAAGGA ATTGATTTCG ACCAGTATGT
AGACATCGCT GGGCGCTATT ATGGTGACTA ACCTATTATC AGCAATTATG GGCGAGCTGT
TATTATGTTT GGGTATGTTC AACACACAAA ATTCTGTTCC TTTGGTTGAC CTTGTGCTCA
GCATTCCCTA TCAATACACG GAATCACGTA TTCTCAAAGC TCGGCTGGAG TTTCTTCGAG
ATAATCATAG GATCCGAGAA AACGATTATC TTACTTTCGA CGCTATGCGA CATGCTGCCC
AATGCGTTGG TCGTGTGTTG CGAGGGAAGA CCGACTGGGG TCTGATGGTC TTTGCGGACA
AGGTGAGGAT GGAATTCCGA ACGTTGAATA CTTCCAGCTT AACTCTTATA ATAGCGATTT
GCGAGACAAG ACAAGAGGGC AAAACTTCCG AAATGGATCA ACAGTTATAT TACGGAGGCC
CATTCCAACT TGTCCACGGA TGTGGCTGTT TCGCTGGCCA AAAAGTTCAT ACGTCAAATC
TCGCAACCAT TTGATCACAC ACAGACAGGG ATATCTTTAT GGACTCTTGA GGACATAGAG
GAGAGGCAAA GACGGGATAA GGATGAAGCT GAAAGGGTCG AAATGACACA ATCAGCAGCA
ATTAGAGAGA GTGCCGCCGA GGAGAATGAC CATGCTCCGC TTGCTAGCGA TTACATGGAG
ATTGACGACG CCGAGTTGGC GGGGCTGTCT ATACCCATAG ATGAATAATC GGGAGCTAAA
TAATCGAGTT TGGTGGATTG TGAACTTTTG TTGTAGAAAA GTGCGGATGG ATTAATACTG
TC
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| Protein sequence | MKFMLGDLPV LFPYDRLYPE QYSYMADLKT TLDAGGHCVL EMPSGTGKTV SLLSLIIAYM
QFYPNKRKLI YCSRTVPEIE KALAELKRLM MYRAEMGAND GDFRGLGLTS RRNLCLHPEV
SKEKKGKIVD SRCRDLTSAF ACEKGRADPG SVPLCSFHEE LNNYEPGNLI PPGVYTLDDV
KKYGQEKGVC PYFTIRRMLP FLDVMIYSFH YLLDPKVAEQ VSAEMSKESI VIFDEAHNID
NVCIESLSID LTRPMLDSAA RSVNKLSDKI AEIKETDAKK LEDEYAKLVE GLQEANERVE
DDDMLVSPVL SKDMVDEAIP GNIRKAEHFI AFLKRFIEYL KTRMRVLHVV AETPQSFLAH
LKEITYIDQR PLKFASERLT CLVRTLELTN LEEHSALQKV AGFGTLVATY EKGFLLILEP
YETEHATVPN PIFHFTCLDP SLAIAPVFDR FASVVITSGT ISPLDMYPKM LQFQPVMEQS
YPMTLTRNAF LPMVITRGSD QVPISSRFEV RNDPAVVRNF GSILIEMART VPDGVVAFFP
SYLYMESIVS AWYDMGILSE VWKHKLLFVE TPDAMETSIA LRNYREACNN GRGAVLLSVA
RGKVSEGIDF DHNYGRAVIM FGIPYQYTES RILKARLEFL RDNHRIREND YLTFDAMRHA
AQCVGRVLRG KTDWGLMVFA DKRFARQDKR AKLPKWINSY ITEAHSNLST DVAVSLAKKF
IRQISQPFDH TQTGISLWTL EDIEERQRRD KDEAERVEMT QSAAIRESAA EENDHAPLAS
DYMEIDDAEL AGLSIPIDE
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