Gene CNA05540 details

Gene Information

• Locus tag: CNA05540
• ID: 3253271
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 1483418
• End bp: 1485647
• Gene Length: 2230 bp
• Protein Length: 678 aa
• GC content: 46%
• IMG OID: 638252874
• Product: conserved hypothetical protein
• Protein accession: XP_566879
• Protein GI: 58258933

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.202932
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGACAT CGGAAGACTT GCATCGTCTC GCCTTTCGTC GTCGTGCAGA TCTCCGTGCT 
GGCTCCAGTG CAAGTGCTGC TTGTATTCGG CAATTAGTGA GCAATGATGA GCTCCATCGT 
CCGTTTGTCA ACACACGCGA TGAACTCATT GGTTTGGTTT ACACCAAGCG AACTGCTCGC 
GCACTGATTC ACCGATTTCC CGAAGTCCTT TTCTTCGACT GCACATACAA GACGAACCTG 
TACCGGATGC CCATGCTCCA TATCGTCGGA TCCACATCGA CAGGTATGAC ATACACTGCA 
GGAGTCATCT TGATGTTGCG TGAAACCACA AACTGGTATA CCCAAGCTCT CAATTCGTTC 
TTCGAACTTG TCGGCAAACC GGATGTCAAG GTTGTCATTA CCGATCGTGA CCCAGCACTC 
ATCAACGCTC TCATGTCTGT CCTCCCCAAG GCTTACCGCT TCTCCTGCTT CTGGCATCTT 
CAAGAAAATG TCAAAAGCAA TATAAGGCCC TGTTTCGTTG ACGAAGAGAA CATCGTCATG 
GCTGTCTCGA ATTTCTGCAA AGCTTGGGTA CGGTATTGTG TACATGCAAA ATCGGATGAG 
CAGCTTGAGG AAGGTTATCG GAAGATGGAA GAACTTTATC CTGGTCAGAA ATATGCTCGA 
GCGATCTCGT ATATCCGGGG TTTGGATGAA ATCAAGGAGC GCTTTGTACA TGCCTATATC 
AACAAGCAAC TTCACTTCGG ACAAACCGGT AATTCACGCT TAGAAGGTCA GCACGCAACT 
CTTAAGAAAT CAATTGACAC CAAGTACGGT GATCTTCTGC TTGTCATTGG GTCTCTAAGT 
ACGTATTTTG ATCAGCAGTG GTTGAAAATT TTGAAAAGAA TTGAGCTCGA GAGAACGAGG 
TGTGCTACAC ATATTCCCAG TACTTTTGTT CGGGTATGTT CCTTCCTTCT TTCTGTCCTT 
TTTGTAATCG TGCTGATATA ATTGTTTAGT TAAAAGGCTC CATATCCCGC GCTGCAATGA 
AGCTTCTTGC TGAGCAGTTG ACTTTGGCCA AAAGATATTT GGGTGATTAC GATGAAGGTG 
TCGATGACTT TGAAGAATCA CACCCGTGCA GTGGCTCGTT TACAAAATCC CATGGATTGC 
CCTGCGCCCA TCGTCTCATT AGCTTCGTCC GGGAAAGAAG ACACCTTGAA AAGGATCACA 
TTCATCCTCA CTGGCGTCTC GGGTCTGCCG CAAGTCTCAA AAGATACCTT GACCATATTA 
ACAGACTTGT TGGCACCCCA GATACATCAG TCATACGGCT GGATGATGTA TTTGACTTCG 
GTGAGGACCA AGAACTTATC CTCGATCCAC CCATTTTAAG CACCAAGCGG GGAAGGAAGG 
CCCCTAATCC ACCAGTGTTG CAGGAAGACC GGATGTCGGC ACCTTCAGGA AGGTACTTGA 
CTCAGTCAGA AAGAATTATG GGGGCTGGAT TGACCCAGCG AAAAAAAGGG CGCTGTAAAC 
ACTGCCAAAG TTCCACTCAC TATACCAAAG ACTGTGCGCG TGTTCAAGCG TCTCGAAGGG 
TCGACAAAAA CCAAGAAGCT GAGAATGCAG GTGAAGACAG AAGAGTTCTT GTCCCAGATA 
GCGATGATGA GGAAGGAAAT GAGGAAGATC TTGTCGAGGT ACCGAATGAA GTTGGTCCTT 
TCATTCAAAG ATTAGCCCAA CTCGATGACC TTGCGCTTAC ATATTTTATA GCCCAATCTT 
CGTCCAAAAA AGCATTCTCG GTCACAATAT CCTGCCCCCT CTCAAATATA TCCGTCACAT 
GCTGTTCAAA TGCAGCATCT TCCTCCTGAA CCCTCGGTCC CCCAATTACC CCCTTCTTCC 
CAATTCTATC CACCATTATC ACAATACTAT CCCCCTGCTC CACAGCATTA CCCAACTTCA 
AAATACCATG TGCCTCCTAC CCAGTATATC CCTTACAACC AAGTATTATT CCACAATCAT 
TCCGAAGCCC CAACTCCCTA TCATTACCCT TCTGTTAGTG GATACAATAA TCTCCAATCT 
CCTCAAATTT ACCAATACAA CTTAGAGAAT AATGTGGGCA AGGATGCGAG CATTCGATCG 
CAGGAGGATA GTATTATAAT GCAGCGAGGG AGAGATCGAC ATAGCTGGGA ATGAAGGCGA 
AGGAAGAATG AATAGATGTC GAAAGAGGAA TAGATGTCAC AAGAAGAATA GATGTTTATA 
ATATTAGAGG 

 

Protein sequence

MLTSEDLHRL AFRRRADLRA GSSASAACIR QLVSNDELHR PFVNTRDELI GLVYTKRTAR 
ALIHRFPEVL FFDCTYKTNL YRMPMLHIVG STSTGMTYTA GVILMLRETT NWYTQALNSF 
FELVGKPDVK VVITDRDPAL INALMSVLPK AYRFSCFWHL QENVKSNIRP CFVDEENIVM 
AVSNFCKAWV RYCVHAKSDE QLEEGYRKME ELYPGQKYAR AISYIRGLDE IKERFVHAYI 
NKQLHFGQTG NSRLEGQHAT LKKSIDTKYG DLLLVIGSLS TYFDQQWLKI LKRIELERTR 
CATHIPSTFV RLKGSISRAA MKLLAEQLTL AKRYLGDYDE GVDDFEESHP CSGSFTKSHG 
LPCAHRLISF VRERRHLEKD HIHPHWRLGS AASLKRYLDH INRLVGTPDT SVIRLDDVFD 
FGEDQELILD PPILSTKRGR KAPNPPVLQE DRMSAPSGRY LTQSERIMGA GLTQRKKGRC 
KHCQSSTHYT KDCARVQASR RVDKNQEAEN AGEDRRVLVP DSDDEEGNEE DLVEVPNEPN 
LRPKKHSRSQ YPAPSQIYPS HAVQMQHLPP EPSVPQLPPS SQFYPPLSQY YPPAPQHYPT 
SKYHVPPTQY IPYNQVLFHN HSEAPTPYHY PSVSGYNNLQ SPQIYQYNLE NNVGKDASIR 
SQEDSIIMQR GRDRHSWE