Gene CNA05340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA05340 
Symbol 
ID3253303 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1427059 
End bp1430042 
Gene Length2984 bp 
Protein Length822 aa 
Translation table 
GC content49% 
IMG OID638252852 
Producttransposable element- crypton-Cn1, putative 
Protein accessionXP_566846 
Protein GI58258867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGAACAACAT TGCTCATATT ATCCATCGTT CAACTTTTTT TGACTGCCAC CACCTTGCAC 
AATGCCAGCT ACCAGACGCA CAAAGGGGCT TGACGCATTC CAACCTGCTG ACACTCTCGA
TCCTCGCACG GCTCACACGA TGCAAGATAT CGCTGCTCTT CGCAAAAGTA ATTTGACATT
GAAAACAGCA CGACAATATG CAACCAAAAA TAAGCAATGG TATGCGTACT GTGCCCACAT
GAATTTTCTT ACAAAGTGAG CCGCCATCTC CCAAAGATGT ATGTGTACTA GTTGTTGGCT
GACGTGTTGC TCTTCAACCT GAAGAGATAC TGTAACTCCG GCAAACGCAG CGTCGTATCT
GTACAATTGG GTACTTAAAC TTCCTCCTGA CCATCACCGT AAATGATTTC CCCACAGGCT
TTGTAGAGCA TACGTTGATA TACTTCGCAG GTAAGAAGCA GGCGCACATC CTTGTAAGAG
AAGCCCAAGG TGGGCAAGTG CCACAAACTG TGCGGGGTCA GGAGCAAGGT CAGACGGCAC
TGTTTATTGA GGAAGACGAG GAAGTCGACG ATTCAATGCT TGCAGGTATT GATGAGCCTG
CCGACCCAGA CACCGTTCAG GACGAGCGCC AGATGCTTCT GAATGGTGTC AATGACTTGC
CGGATTTTAA GGAATTGCGT GAGAGTCTTG GATATCATGG TGCAGGTGAG CTATCTCAGC
TTCAGAGCAG GGTGGCTGGT AACGAGCCTA CAGACTCGAG TCTTGAGCAT CTGCTGCAGT
GCAACCAATC TCTTGCTTCT GTCAGGCTCT ATTTGGCTGC TCTTGTCGAC CTTTGGGAGA
CCCAAAGGCA GGCGGGAATG AACGCCTTTC CCTCGCCGCG CACGAAAGCA ACCAACTCTA
TCCTCAACGC TCTACGTCGT GTACGCAACG AACAAAGTAT CCTTCGTTGT GATGATAAAG
GTGACGGTGA GCTTTATCCT GCCTTTCCAT GTAATAAGAA TCTAAGCTGA GCCCGCCCTC
CAGATCTGTT CTACGATGGG ATAGCGACGA CCGAGAACAT GAAAAAGTTG TTTCTCCATT
ATCTGCATCG GGACAGCGTC GAAGGTCTGC GCGATCTCGC TGCGCAAGCC GTCGGCATCC
ATGGACTTTT ACGTGCGGAT GATCAGCTAA GGATTACCCT ATCGTCCATG TCCCTCAGAC
TCTTCGAGGA TGAGGGACCC ACACCTTGTC GTGGTGTCGT TTTCGCCATA AGAGAGGGGA
AGACGACACA TGACGGTCAG ATCCAGTACT CAACTCTGTT GAGGAACAAG GATGTGACCC
GGTGCCCCGT CTCTTTCCTT GTTCTGTATC TGTTTGCCCG GTGAGCGGTT TTGTTTCTGC
CGCCTTATGA AGTTGCTGTC CAAATGATCT GATTTGGTCT ACTTAGGTTC CATTTCAGTG
AAGAGCCCTT TATTAACTCA GATGTCTCTT TTCCCTCTTT AAAAAATCGC CAGGACTGGT
ATCACATCCC ACTCTTTGTG TCCCGCCAAT CCAACGCAGT TACGCGTCTG AAATATGACG
CTTTGAACAA GAGTGTGCGA AAAGCACTTC AAAGCTGCAA CATCCATTGT AGAGCGTCCA
CTCACACGTC TCGCAAATGG GGAGCCCAGC TTGCCGAAGA TGGCGGCGCG CCTGAAGAAG
ATATCATGAG GCAAGGAAGA TGGTGTACAA AGGTGATGGA AACTGTCTAC CTCAGTAAAT
TCCCTCTCAA AGCATTGAGA GCCCTTGCAG GGTTCCCAAA AAAGAAAGGT TCTTATTACC
TTCCTCGCGA CATGGAAGTG CCTCAGGAGC TTATCGAGAG CGTCTTCCCA TGGGTTGATG
CTGCGTTGAG TCATATTCCG TTACATGTGG AAAGTTAATT AACTGATGCT GAATATGCAG
TGAGGCTGAG CTCTTCGACC CCGATCGCTT CCAAGGCGAC AAAGCTGGTC GAGCATTCAT
CAAACTCATG GACTGGTTTC GCTCGGTATT AATCCAAGAT GCTCCCTTTA TTCGCCAGCT
CGAACCTGAC CTCTTTGTCT GGAAACACCC TGTCTTCTCC ACACCCACTT TCCTTGCCTT
TGAAGCAAGG GCGCTAGCCG AAGCGCAAAG CGCGGAAGCA CGCATGAGCG AGGATGCAAG
GCAACTTATC CCTGAACTTT CCGATTATCT CTCTACCAAC TTCACTGCCT TGTTTAAGGC
CACATATAAC ATCGACACCA CGTTAACAGG ACTAGCTGCG TCCGTTGCCA GCAATTCCCA
ACTTATACAG GAAGAGCGGC GTGCTGAGAA ATATGATGCA CTGTTGAATG GTATTGGAGA
TGCATTCCAT GCAATGGCTC GCCGCCAACA CAGCGGCAGC ATTTCATCTC GATCAAATGG
TGAGCATGTT GTCACAGATG GTCATGGATG GCGTGAATGT TAGCTGATAA TATGTCAGTC
AACGCCCAAG AGAGCCAAAC GACCAGTGTA CTTGAAGGTC AACACCATGG GGGGTTTAAC
CCATCCGCTT CTTCCAACTC CGTCGCTTCT CAGCCCAACT CCGCTAGCGA CTCTGGTGAC
CTAGTTCAAC TCGAAGCATT GGTCTACAAG ATGGATCGCG AGGTAGGAGA TGTACTAGAA
TTATGGGATG AGTACATCGT TGGAAGGAAT GGTCGATTAC CTGTCAGGGA AATGAGTCAA
CGAAACGAGT TTAAAAAGAA CGAAGCCGAA AAAAAGATGT TCAATCGGAG AAAACCTATC
TATGAGGCCA TCAGAGACCT AGCTCGGGGG ATGAACATGG GTGAGAGGGA AGCTGCGGGG
TTAATTGAGG AGTATAGGAT TAAAAACTCG ATGGGGCTAA ACAAGCTGAG CAATGTCGTC
AAGGAAGTTG TCAAGAACAT GATTGTGCAT CAGTCTTATC GATATCGAAC GTTGTAACTG
TTTTAAATTG TAACCATATG ATAGTTGTAC TTACGTTCAT GCAC
 
Protein sequence
MPATRRTKGL DAFQPADTLD PRTAHTMQDI AALRKSNLTL KTARQYATKN KQWYAYCAHM 
NFLTKDTVTP ANAASYLYNW VLKLPPDHHR KKQAHILVRE AQGGQVPQTV RGQEQGQTAL
FIEEDEEVDD SMLAGIDEPA DPDTVQDERQ MLLNGVNDLP DFKELRESLG YHGADSSLEH
LLQCNQSLAS VRLYLAALVD LWETQRQAGM NAFPSPRTKA TNSILNALRR VRNEQSILRC
DDKGDDLFYD GIATTENMKK LFLHYLHRDS VEGLRDLAAQ AVGIHGLLRA DDQLRITLSS
MSLRLFEDEG PTPCRGVVFA IREGKTTHDG QIQYSTLLRN KDVTRCPVSF LVLYLFARFH
FSEEPFINSD VSFPSLKNRQ DWYHIPLFVS RQSNAVTRLK YDALNKSVRK ALQSCNIHCR
ASTHTSRKWG AQLAEDGGAP EEDIMRQGRW CTKVMETVYL SKFPLKALRA LAGFPKKKGS
YYLPRDMEVP QELIESVFPW VDAAEAELFD PDRFQGDKAG RAFIKLMDWF RSVLIQDAPF
IRQLEPDLFV WKHPVFSTPT FLAFEARALA EAQSAEARMS EDARQLIPEL SDYLSTNFTA
LFKATYNIDT TLTGLAASVA SNSQLIQEER RAEKYDALLN GIGDAFHAMA RRQHSGSISS
RSNVNAQESQ TTSVLEGQHH GGFNPSASSN SVASQPNSAS DSGDLVQLEA LVYKMDREVG
DVLELWDEYI VGRNGRLPVR EMSQRNEFKK NEAEKKMFNR RKPIYEAIRD LARGMNMGER
EAAGLIEEYR IKNSMGLNKL SNVVKEVVKN MIVHQSYRYR TL