| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA05320 |
|---|
| Symbol | |
|---|
| ID | 3253307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 1417666 |
|---|
| End bp | 1422026 |
|---|
| Gene Length | 4361 bp |
|---|
| Protein Length | 937 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 638252850 |
|---|
| Product | meiotic recombination-related protein, putative |
|---|
| Protein accession | XP_566842 |
|---|
| Protein GI | 58258859 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTCCTTCCT TCAATCTCCA TTTGTTTCCA ACAACTACTC GTACGCTTCA ATCATTATCA
TGCATGGGAA CCGCAAAAGA CAAGCTACTC CTGCTATAAG CATTGGCAAA TCAAGTTCAG
AAGAAATAGT CAAACGACCA AAGGGGAAGG AGAGGCGAGG CGCAAGACAA CAACCAACAG
CACCGTCTCT GGCAAGCCGG CCAGAGCAGC CACAATGCGA GTCGCAACGA ATCCTGACAC
GAGGATCACA GATTGAAGAG AAGAATACCG GACAAAGAGG CGATGTCATA TTGGAAGGTG
AGATCAAGGA ACAGAGGGTA AGCGGCGCAG CACCCCACCG CTTGTTTTGC CATGCTGAGG
CTTCGTTTTT CGACCTGTAG ACGCTTTCAT TGCATGCGCC ATTCACGGGC AATCTTGCTG
CAGCATGGTA CGACCCAGAG GAGAGGAAGA TACAGGTTCT GGAAGACACG AAGGACACGT
TGAATTGGGA TCTGGCTTGT CTTGGTAAGC TTCTTGTAAG ATGACATGGC GATATTTTTT
AAGATATTAA TCTATCTTTT AGTCATAGAG CAAGTGCGGC CCACGCTTAT CATAGTGAGC
ACTAAAACCC AGAACTCCCT GATGGAGAAG ATAGAAGAGT ATCGTCAGTT GTCACTGTTT
GAAGGAATAA ATGGAGCATT GTTGACTCTT GAAGTAGGAG ACGAGAATAA GTGTGAACTA
CTCCTCTTAC CTTCTCGTTC TTGTAGTCCC AAGGCAGCTT CTATACAGCT TGCTTCTGTT
CGAGTTTCAG ACTCATCTGT AACGTTATCT GTCTGTCGCG CAGAAGAACA ATCGGCGCAC
GAGCCGCGCA ATGGATCGGC AATAGAGGAT GCCAACTGGA GAGATGAAGG TGCTGGGATG
GGAACTTACA GGCTGAGTTT GGTTAAGCTA GGGTGTTGGA TGAACATCAA TGCGCCTTTA
GCTGTGAGTG AAGTCCTGCA TCCATGCTCA GTGGTGCCAA CCAAACTTTA GACGGTAGCA
GCTGGAATTT TAGTTGAGCA AGTAAAAAAA GGTCGCACAA TGGAGGCCAT GCCAGGTGAA
CAACACTTCA ATGGATTAGA GCTTACTGTC TTGGAAAGTA TGGATTTGTA GGTTTCTGTC
AAACATACTT TCTAATTAGC AGTGATTTAC GGGCAACAGG GAAAGGCACA TGCAGATAAA
CAAGGATGCC TTAACGTAAA TTTTTGACTG GTAACATTTA TGCTCATTTG GGAGATGGCT
GACTGCCTGT ATCAGATCGT TAGCAATCTT TGATGTGGAG TCGCACGCAT TCATGTATTC
CGAACAGAAT AAACAAGCAT TGTCTATATT CGGTAGAAGA TTTCACCAGC CCGTTTTGGA
AAGTCTATTA TAGACTGATG GTCACCACAG GCAAGCTTGA CTCTACTGTC ACCCCCCTCG
GCAAAAAGCT ACTTCACACA TGGCATCTTC GCCCATTACT CGATCTTTCC GAGATCTCTG
CCCGGCATGA CGCTGTTGAA TTCTTTTCTT CCGCCGAGAA CGCACCCATT ATGACGAGCT
TGAGGAAAAC CATGAAGGGT GTAAGGAATG TGCCTGCACA TTGTACGAAA CTCCAGACTG
GAAGGGGGAG CTATGTCGAA TGGAAATGTT TGGTGGACGT GAGTGATGTC GTGAACTTAT
GGCATACCGG TGGAGAGAAA TTACTGAGAA GTGAGTTCTT CAATAGGCTT TGACAGCTGC
ACTCGAAATC AGGAATTTCA TGTGTGGTAT AGCTACTCCT GTGCCATTGC CAATTGCAGA
AAAAGTGGGT CATGGCCGTC ATCCCTCAGC TTACTTAACA GATCAGAGAA ACCGTCAGAG
ATAATCTTAT CATTTTCTGC CAAGATATGA ATGCTGTCGT AAGTGGGTCT TGAAATCTAA
CGCACTGTTC TGAACAAAAG GTAGATTGAT TGGGATGCTT CAAGACTCGA AAGCCGAGTT
GCTGTTCGAC CAGGTGTTGA CGATGAGCTG GATAGCTGGC GGGAAATATA CGCAGGTATG
CGTGGTGGTC ACTATCTCAT GTATTTGATC AGACTGACGT TCCTCATAGG TCTTGATGTA
ACGCTCGTAT GTGCCCTCTC CCATTATCCA TTGAATGTTC ATCCTCAGGG TGTTCCAGAA
CCAAGTAGCT TTAATGATAT ATTCTCAAGT ACCTCCCGGC ATATCTTCTA GCGTGAACGT
TGTCTACTTG CCTCAGTTAG GATACCTCGC AGTGATACAG GCAGATGCAG ATGAGCCACC
AGAAATACCA GGATGGGAAA GTCGAGTACG TGTTGTAACG GACAGCTTCG TGCGATAAGC
AATTAACGAT AGCTGTTGTG GTAGTTCCAC ACAGAAGATC GGTACTATTA TAAGACGGTA
GAGATGGAGG ACTTGGATGA CCATTTCGGT GACTTGTACA CATTGATGAT CGGTGGGATT
CCTTCTTCCC CAGTATGAAC TTTTGCTAAT AATGCGATTA GGAAAAGAGA TTGAAATCAT
TCAAAGGCTG GTAGAGCACC TTAAGGGCTA TGAAACATCA ATTCTGCGGA CTGTCGATAC
CATAGCGGAG TTGGATTGGT GGGTTTTCTC GTATCGTATT TGACTTTGCT TATGTTTCTG
TTAGCATCTT GGCATTGGCT CGAGCAGCAA GAGATTTCGG GCTAAAGCGT CCCATCATGA
CGGAAGAGCC TGTGCTACAG ATTCGGGGGG GACGACATAT TCTGTATGAG AGTTTGGTTC
CTCGGTACAT TGAGAACGAT ACCATGATAG CGTCTGGAGG GGTCAATGGT TTGGCCAGCA
TGGTAAGGTT CGCACCATGA TACTTGTGAC CATCGGAGTT AACACAACGA CAGATGATTA
TCACAGGCGC AAATGGTTCT GGCAAGTCTG CATATGGCAA GCAGGTGGGC CTTATATGAA
CTTTGAAATG GTCGAGGCTG ATATCGCGCA TTATAGGTCG CTTTGATGGC TTTCATGGCG
CAGATAGGGA GTTTTGTACC GGCCGATGGA GCCAGAATTG GCATTTGCGA CAAAAGTAGA
CATTTTGTCA TACAACATAA GAATGAGTAT TGACAACAAT CTGGGTAGTA TTCACGCGTC
TCCAGACCCG CGAGTCGACT TCAAGAGTAA GGCATCTTAG GGGGTGTTTC ATAGCCAGTC
TGACCTTCTT AGTAGCATGC TTCCGCTTTT ATGATAGATC TTGGCCAAGT TTCTCAAGCA
CTCAGAGGTG CAACCCGACA TTCCTTGATC ATAATGGACG AGTTTGGTAA AGGTATGTAC
GAAACCTCGC ATACTGATTT ATAGTCCCCA TATTTTGCAG GTACCCATCC TGCCGACGGG
GCTGGGCTTC TCGCCGGTAC AGTTGAGTAT CTTCTGCAAG GGGTTTGTCC TCGATCAATT
GTCATGACCC ATTTCCAGTG AGCCGACAGA TGAAGACCTC TTCAACCATG TTTACTTCCT
TACTCAGCGA ACTTTTTGCC AACCATTTCA TTACGGAAGA CCGATTACCA GTGCGGTTTT
GCCACATGAA GACGCTTTTG ACGAATGATT CAGATGACAT ACATTATCTT TATAAGTAAG
TCGTATATTT TCTTGTCAAA GCCCTTAGTC GGGAAATACT CATGTATATA TATTAAATGT
ATAGGCTTGT CCCTTCACTT AGCTTAACTT CAAACGCAGC AGAATGTGCG CTCAGACACG
GGATCCCGAA GAATATTGTT GACAGAGCCC AAGAGGTCAC GTATGTAAAT TATGTGGAAA
GCTGTTGCCC CGCTGATCAG TAGTCATCAG CAAATGCGTC TCAAAATTTG AAATATCCAA
GTTGCTCGAT GCGACTCTGA CAATGGAAAA TATACGGGAA ATCAAAGCAG CAGAGGAACT
TGCCAAGCGT TTCCTGGCTT GGGATATCGA CCCAGACAGT GAAGATGTGA TCGACGTATT
GCAGAAGATG ATTGAAGCGA CGGATATATT CCTGGAGGAT GATTCTTCTG TCAGTGCGGA
AGGAACAACT GCGAATCGAG AGAATGCTAC GATCAGTGAT GAAGAAGGTA GTATAGATTC
AAGCGAGGAG ATTGACTGAG AATTTTCGGC TTAAGACTTC ATGTTCACCA AACAATGCAA
ATGTACGGAA ATCATTCTGA CTACGTAGAT ATTCAACTAC CTCTTTCATT CTATCACTGC
TGATAACGAC CGATGATTAG TATCCGCCGC CGGAAAACAG ATACGTTTCG ATTATCACGC
CTTCGGTTCA ACTAGCCGTA CGTAGGGCGT CGATCTCTTT CTCATCACTT CTAAATTCTC
AGATTCGTAC TTTTATTACT CTAAGTTGTT GTGCAATTAA G
|
|---|
| Protein sequence | MHGNRKRQAT PAISIGKSSS EEIVKRPKGK ERRGARQQPT APSLASRPEQ PQCESQRILT
RGSQIEEKNT GQRGDVILEG EIKEQRTLSL HAPFTGNLAA AWYDPEERKI QVLEDTKDTL
NWDLACLVIE QVRPTLIIVS TKTQNSLMEK IEEYRDENKC ELLLLPSRSC SPKAASIQLA
SVRVSDSSVT LSVCRAEEQS AHEPRNGSAI EDANWRDEGA GMGTYRLSLV KLGCWMNINA
PLATVAAGIL VEQVKKGRTM EAMPGEQHFN GLELTVLESM DLERHMQINK DALTSLAIFD
VESHAFMYSE QNKQALSIFG KLDSTVTPLG KKLLHTWHLR PLLDLSEISA RHDAVEFFSS
AENAPIMTSL RKTMKGVRNV PAHCTKLQTG RGSYVEWKCL VDALTAALEI RNFMCGIATP
VPLPIAEKIR ETVRDNLIIF CQDMNAVIDW DASRLESRVA VRPGVDDELD SWREIYAGLD
VTLNQVALMI YSQVPPGISS SVNVVYLPQL GYLAVIQADA DEPPEIPGWE SRFHTEDRYY
YKTVEMEDLD DHFGDLYTLM IGKEIEIIQR LVEHLKGYET SILRTVDTIA ELDCILALAR
AARDFGLKRP IMTEEPVLQI RGGRHILYES LVPRYIENDT MIASGGVNGL ASMMIITGAN
GSGKSAYGKQ VALMAFMAQI GSFVPADGAR IGICDKIFTR LQTRESTSRH ASAFMIDLGQ
VSQALRGATR HSLIIMDEFG KGTHPADGAG LLAGTVEYLL QGVCPRSIVM THFHELFANH
FITEDRLPVR FCHMKTLLTN DSDDIHYLYK LVPSLSLTSN AAECALRHGI PKNIVDRAQE
VTKCVSKFEI SKLLDATLTM ENIREIKAAE ELAKRFLAWD IDPDSEDVID VLQKMIEATD
IFLEDDSSVS AEGTTANREN ATISDEEGSI DSSEEID
|
|---|
| |