| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA05040 |
|---|
| Symbol | |
|---|
| ID | 3253353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1335296 |
|---|
| End bp | 1339313 |
|---|
| Gene Length | 4018 bp |
|---|
| Protein Length | 1136 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 638252823 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_566792 |
|---|
| Protein GI | 58258759 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5038] Ca2+-dependent lipid-binding protein, contains C2 domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0208091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCCG CCAGCACAGA CAGCCAAAGC ACAGACTTCC CGGACCTGCC CCCCGCACCG
CCCTCCCACG TGGTCGGGCA GGGATACTCC GCGCACAACC CCGTGCCCAC CGTCCAGAGC
TACAAGGCCA CCCAGCAGAA ACACGAGGAA CAGGCCCACG CCTACGCCGA GATGGTCGAG
AGGCGTGCGA GGGAGGCCGA GGAGCGGGAG CGTCGTTCCA GGGAGAGCCG CAGCGGCGTC
GGAGGCGACG GCCATGCTGC ACCCCAGAGC GGAAGTCCAG ATGCCCAAGC GGGTAGCGCG
CCCGTCAATG CCGGTCCCGA CGAGGAGACG AATGCCGCCA AAGTGCAGGA GGGCAAGAAG
ACTGACGAGC CGAATGCTGC CTCGGGAGCT AATGAAAAGG CCCGCATGAT GGAACAGATG
AATGCCAACC AGCGTGAGTT GTTTGCCGTA GGGTACCAGC CGCTCACCTT TACCACGTCC
AGTCAAACCT ACCGAGCGCT TCGCAAAGGC GGAAAAGGGC CAGCGCCGAG TGCGCGACCC
CATCACCGGC GCAGAGATCA TCGTCAAAGA TGCCGATCCC AAAGGCGAGT CCCGCCTCCG
CTTATGGGCC CCGCCCACAC GCCAAACCTG CTGATTGTCC GTATAGACTT TGACAGCAAG
CAGCCCGCTA CCAAGGGCAC CAACGTCCTC TACCATGCCT TCCCGCCTCC CCAGCCCATC
TCCGTCAAAA CTGCAATGGA GAAACTCAAA CTGATCCAAT ACGGTATTGC AGGCTTCACC
TTCTTCATCT GGCTCACCGT CGCATTTGGT TCCGGTCTCT TTGCATTCTT TTACAGATCT
ACCTTGTGCT CGGTGTCTGC ATTTATACTC ATGACCGCTG TGAGCCTTGT GGAGAGGAGT
TTGGAAAGGG ATGTGGAAAA GGTAAGGCAG GATATGGGAC GACAACGAGG CGAGGCGTTT
AGTCCGCCTG TTCCAGAGAG TGTAGAGTGG ATGAACGGGT TGATCAAGTT GGTCTGGGGA
CTTGTCGATC CGTAAGCGTT TCCCATCTTC CGAAAACCAA ACAAAAAAAA GCTGATACAT
TTGGTAGCGC AATGTTCGTC TCGATCGCCG ATATGGTGGA AGACATTCTC CAACAATCCC
TTCCCGGCTT TGTCGACGCC GTCCGTATCA CAGACATTGG TCAAGGCACA AACCCAATCC
GTATCACCTC TGTCCGAGCA CTGCCCGACC AGCCGGGCGA CGAAGGCTAC CCCCACACCG
GATGGATCAA CCAAGGTAAC GACGATATAA AGACGAAAGA TACTAGCGGC CAAGAAGTCG
AAGAGGATGA AGCGGGAGAC TACTACAACT TTGAAGTCGC CTTTTCTTAC GCTGCCTTGC
CCGGCCAAGG CGCACACCAG CGGGCAAGGA ACATTCACCT CTTGATCGAA TTCTTCCTCG
GACTGTACGA TTGGCTCCAT ATCCCCATCC CCATCTGGAT CCAAGTCGAG CAAATCTTTG
GTATCATCCG TCTCCGCGTA CAATTCATCC CCCAGCCACC GTTCGTCCGC AACTTGACAT
TCGCCCTCTG CGGCGTCCCC GCTGTCGAAG TCAGCGCCAT CCCCATGTCC AAGCACTTGC
CCAACGTGCT CGATCTTCCC TTTGTATCGT CCTTTGTGAA AATGGGCATC GCAGCCGGTA
CGGCCGAAAT GTCAGTGCCG AAGAGTATGA CCATCAACCT CCAGGAAATG CTTTCCGGCG
CGGCCGTAGG CGACACGAGG GCCATCGGCG TCTTCCTCAT CACGATCCAT CACTGCACAG
GTCTTTCATC CCAAGATAAC AATGGTTCCT CGGATCCCTA CGTCGTCCTC GCCTACGCCA
AGTTTGGGAA ACCTCTTTAT TCGACAAGGA TCATCTTGGA GGATCTTAAC CCGGTATTCG
AGGAGACTTG TGTTCTGCTC TTGACAATGG ATGAGGTGAA AAGTAAAGAG GATTTGGCAG
CTATGCTTTG GGATAGCGAC AAGTTGTCTG CAGAGTAAGC CTCTCCCCCC CCCTCTTATT
TCTCTCTTCA CCGCATCAAT CTAGCAAAAA AGTCACCTAC TGACATTCAC ATTCCAAATA
GCGACTTGGT GGGCAGAGTC CAAATCCCCG TAGACGAACT CATGGCCAAA CCCAACCAAA
TGATTCGTCG CGAAGACGGT CTGATGGGAT TCGAAGACGC CAACGACATG CCCGGAAAAC
TCGTCTGGTC GATTGGGTAC TTTGAAAAAG TGCCCCTGCG CAAAGAACTG GAGCAAGGCC
CCACCGTCGA AGAAGCTGCC AGCGCTACCG ACCCGGGCCC CAAGACGGCG CCAGAGATGG
AGATGCACCC GGCGGACATT GCGCCAAACC CGGCTGCCAA AGACTTGCCC CCGCCACCGC
CGGATGTGCT CAAAACTCGA CCGGATCCAA GATGGCCGAG CGGTGTGCTC TCCATCATTT
TGCATCAGGT AAACAACCTC GAGAGACAGA ATCTGAAGGG CGCGAGTGGG AGCAATCGAG
AAGGCGAAGC AGGGCAGGAT ACAGACGAGC CAAGCGAGCA AAGCGATAAC CTGCCCAGCG
GTTACGGCGA GTTTATCGTC AATGACGATC TGGTGTACAA GACTCGCGTA AAACAGTACT
CGACAAACCC GTACTTTGAA GCCGGTACAG AAGTCTTTGT AAGGGACGTT GAGAACACGG
TGGTAAGAGT CGTAGTGCGG GATAGCAGGT TGCGAGAAGC GGATCCGATC TTGGGTATCG
TTAGTGTAAG GTTGAGCGAA GTGTTTAGGG AGGGCAGTAG TGTGAATCAG ACTTATGCTC
TGACGGAAGG TGTCGGTTTT GGAAAGTGGG TCATTTTCTA CCTTTTTTTT TTCAAACGCT
CACTACAATT CCCGGGACGC TTACAGGGCA AACATCTCAT TCGCTTTCCG AGGCATGCAA
ATGACCCTCC CGCCCAACAT GCGTGGCTGG GAAACGGGTA CACTCGAAGT CTCCGACGTC
CGCTTCACAT CGACCAACCC CGCCCTCTTT GACGCGCAAG CTACCCGTCT CCGAGTCGTC
ACTTCTGAAC AAGTCGAAGT CTTACCCAAA AAGGAGGCAG AAGTCCAAGG GCATACCATC
TCTTGGGAGA TGGACATGCT CCGTCTTCCA GTTTACGCGA GGTACCAATC TTCCGTCGTG
TTTGAGATTG GTAAGACGGG CGGGCCGCTG AGTATCCTCG GCGTTGGAGT GAAACCAGAC
GCAATCGCCG TGCTGTGGAT GCAAGATCTC ACAGACGATA TCGAGCAGGA AGTTAAATTG
CCTGTGCTTG TCAGCAACAA GATTGAGAAC CTGAGGCAGA ATGCGATCAA CGACCAGACA
CAAAAGCATC ATGATTTCAA AGTCGTGGGT GAGCTGGTCG CGAGGATAAA GCTCGATTCC
GGCCTGGATG AAGATCATGA GGTACGTCTC TTCCCCCTCC CTCCCTCCTT CCCCCGCCTT
TTGTCTCAAA TGAGTCAAGA ACTAATGGAT CCCAGCAGAA CTTGAAGCAG TCCCAATCCA
GACGCCACGC CCTCGAAGCA TACGACCATA TCGAGGGCGA AGCCGAGGTT GCGCGCAAGC
AGACTCATTT CGCGGACGAT GGCGTAATCG ACAAGCACGA ACAAAAAGAA CTCGATAAAG
CGCATAAAAG GCAGTTGCAG AGTCGCGGAA GGGGGCCGGC ACAAGTGAAG GCGTATAGGA
GCGCCAAGTG GATGGCCAAG GGCATCACGG ATCGATTGCC CGGGAATAAG CCCAAGACGA
GAGAGCGTCA GTCTAATTTA GTTCCTTTAA TCAGCCTGTT TGGATGTGAG CTAACTTTGA
TATGTAGCTA CCGTTCAAAC TGAGGTGTAA AATAATACCC ACTGTAGCTA GCAAGAAAAG
GATGTGTACC TATCGGAAAT AAATGAGAAT GATGAAGAGA AAGTGAATGT TATTAAGCAG
TTGTTAGTGT AGCTTTTAGA ACACGAAATC GCTTCTTGAT ATGTGAACAA TTCCAGTA
|
|---|
| Protein sequence | MPPASTDSQS TDFPDLPPAP PSHVVGQGYS AHNPVPTVQS YKATQQKHEE QAHAYAEMVE
RRAREAEERE RRSRESRSGV GGDGHAAPQS GSPDAQAGSA PVNAGPDEET NAAKVQEGKK
TDEPNAASGA NEKARMMEQM NANQLKPTER FAKAEKGQRR VRDPITGAEI IVKDADPKGD
KQPATKGTNV LYHAFPPPQP ISVKTAMEKL KLIQYGIAGF TFFIWLTVAF GSGLFAFFYR
STLCSVSAFI LMTAVSLVER SLERDVEKVR QDMGRQRGEA FSPPVPESVE WMNGLIKLVW
GLVDPAMFVS IADMVEDILQ QSLPGFVDAV RITDIGQGTN PIRITSVRAL PDQPGDEGYP
HTGWINQGND DIKTKDTSGQ EVEEDEAGDY YNFEVAFSYA ALPGQGAHQR ARNIHLLIEF
FLGLYDWLHI PIPIWIQVEQ IFGIIRLRVQ FIPQPPFVRN LTFALCGVPA VEVSAIPMSK
HLPNVLDLPF VSSFVKMGIA AGTAEMSVPK SMTINLQEML SGAAVGDTRA IGVFLITIHH
CTGLSSQDNN GSSDPYVVLA YAKFGKPLYS TRIILEDLNP VFEETCVLLL TMDEVKSKED
LAAMLWDSDK LSADDLVGRV QIPVDELMAK PNQMIRREDG LMGFEDANDM PGKLVWSIGY
FEKVPLRKEL EQGPTVEEAA SATDPGPKTA PEMEMHPADI APNPAAKDLP PPPPDVLKTR
PDPRWPSGVL SIILHQVNNL ERQNLKGASG SNREGEAGQD TDEPSEQSDN LPSGYGEFIV
NDDLVYKTRV KQYSTNPYFE AGTEVFVRDV ENTVVRVVVR DSRLREADPI LGIVSVRLSE
VFREGSSVNQ TYALTEGVGF GKANISFAFR GMQMTLPPNM RGWETGTLEV SDVRFTSTNP
ALFDAQATRL RVVTSEQVEV LPKKEAEVQG HTISWEMDML RLPVYARYQS SVVFEIGKTG
GPLSILGVGV KPDAIAVLWM QDLTDDIEQE VKLPVLVSNK IENLRQNAIN DQTQKHHDFK
VVGELVARIK LDSGLDEDHE NLKQSQSRRH ALEAYDHIEG EAEVARKQTH FADDGVIDKH
EQKELDKAHK RQLQSRGRGP AQVKAYRSAK WMAKGITDRL PGNKPKTREP TVQTEV
|
|---|
| |