Gene CNA05000 details

Gene Information

• Locus tag: CNA05000
• ID: 3253359
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 1320457
• End bp: 1322746
• Gene Length: 2290 bp
• Protein Length: 511 aa
• GC content: 48%
• IMG OID: 638252819
• Product: conserved hypothetical protein
• Protein accession: XP_566785
• Protein GI: 58258745
• COG category: [C] Energy production and conversion
• COG ID: [COG1252] NADH dehydrogenase, FAD-containing subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.400566
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCGGAGTATC CGCTGGTGGA GTGAAATGAA AGGGCAACGA ATATAAATAT ACGTATATAT 
TGAGTCTTTT AGTCAAATAC CCCATCTTTT CCTCTACCTC CTTATCCCAA ACATTGCCAT 
TATCTGTGCA TATACGCTGA CTCCACTGGT ATATCCTTAA CCCTGTATTT ACTGTACTGT 
GATCAAAGCC CCTCCTGATT AGTGTGCGTC TCTTCAACTT CATTATATTA TCTTCACATG 
TCTCCGATCT TACTTCTCAA TCTCTGCTTC AGATATCCGC AGCAATACAA GGACTCAATT 
TTGCCAATCT TTACCTTCTT CTTTATACGA CGGAAACGGT ATGGCCAAGT CCGCGATGTG 
CACCGTCGTT GTCCTCGGCG CCTCCTACGG CGGCTGTCCC GCTGTCAAGA TCTTGGCGGA 
GAAGCTTCCT CGTAATTGCA AGTTGATTGC TATTGATAGG AATACGCATA TGAACCGTAG 
GTCTTCCCCA ATCTTATATC TTGACTCTTT CAAGGATTCG TGTTCAAGAT ACAACAAGAG 
CTGATTTATC CTTGCCCATA TCTAGACGTC TATACGTTCT CCCGCTTTAC GGTCAAGACC 
AAACATGCTC CCAAGAGTTT CATACCTTAT AAACATTTGC TCGACCCACA ACCCAAGCTT 
GCGCCCGAAA TAGATCTTTC AACTCCCCCT GAAACACCGC CCATTCATCC GTCCGTCCTT 
GACCAGGAGG ATGACGTTCT AGCTGGAAGA GCGAGACATC AGTTTATTCA AGGCGTGGTC 
ACCAAGTTAT CTTCGAAGGA GGTCACCTTC GTTCGTCCTA GTGAAGAGGA CCGTCCGGCT 
TTTAAAGATG TCGCTTTCAA AAGTGTCCCT GCGGCTAATG TTGATAGCAA GGAGGTCAAT 
ATGACGTACG GCGAATTTGA CGGGCCGGAA GAGAAGATTG AGTACAACTA CCTACTCTAC 
GCCCTTGGCA GTACCCTTCC CGATCCTGTT AACGTCTGGC AACCTCTCAG CGGCCAGCCG 
CGGGTTACGG GAGATGAGCG AAAGCTAGGG AATAAGAAGC GTGGCTTAAA GTTCATGGCC 
ATCCAATCAG AAAAGTTCAA GGCGGCGGGT AGAATCTTGA TAATCGGAGG AGGCGCGTTG 
GGAATTCAGT ATGCGACTGA TTTGAAGGAT GTGTATCCCG AGAAGAAGAT TACGCTGCTA 
CATTCAAGGA CGAGGCTGTT ACCCATCTAC CCCATCAAGC TGCATGTCAC AGGTAGACTC 
TTATTTTCTA TCCCCTTCCT TCTATGGTTA AGCGCTGATA AAAATGCAGT TATGGAAGCC 
CTCACCAAGA TGGGGGTCGA TGTCGTACTT GGAGAACGAG TGATGACATG GCCCGATGAG 
CCTGAAGTGC TTGATGGAAA GACCAAATAT GTTACTACTG ATAAAGGCCG TACATTTGAA 
GCAGACATCG TTGTAAATTT CTGGACCCTG CGTTCTCCTT TTCCCAATTC AGTTGAAGAG 
ACTGACGCAT CAATCGTTTC AGCTGCCATG TACAGGCCAA AGACCCCACG TTTCCTTGAT 
GGCGGAGCTT GACCCTGCAC TCATTTCACC TATGACCGGT CGTATTCGCG TACTCCCCAC 
TCAGCAAGTC TGTCCCTCCC GGCTAGCGTC TGTAGAAAAC ACGGAAAAGC AATTTTCCAA 
ATCATTCATG CCTACCGTAA CGCCTCCCTT GACCTCTTCA TCTGCCACTT CCATTGGTTC 
CGACGAAGAT CAGCTTCAAA CCCAGAAAGA TTACAATCAC ATCTTCGCCA TTGGAGATTG 
TGCGCAGACT AAAGCTATCC AAGCTGGACA TACAGCTTTT GGCCAAGGGG AAGTCGCTGC 
CAGGAACATT TTGAGGTTGA TTGAGAAAGA AGGAGAAGCG GGAAAGATAA ATGACGAGGA 
GTTGGAGGAA TACGAGGCGC CTAAGCCTGC TATCAAGCTC ACGCTTGGCA TTGTAAGTCT 
TCTTTCATGT TTCGACAGGC AAAAATGTTG GAGATGGCGT TTTGACGGAC CTCGTGTAGA 
AAAATGGGGT ACTGGTAGAC GGAGAAAGTG TGACGCCTAA CAATACGGGC GAAGAAGACC 
TGCACGCCCT GCTCATGTGG TATGTCTTTA CTTTCCTCCA GTCCCTTCTG TTGGCGGGCA 
GTGCTGATAG AGGATGTAGG GGACTTCCTA ATGCGGTGGG GATGGACATC AACGAGTAAA 
CTAGCATGGT CGAAGAGGTG ACGACCCGTT GTTGATATTA TCATACATAC CATGCATGTT 
CGTTGTCTCG 

 

Protein sequence

MAKSAMCTVV VLGASYGGCP AVKILAEKLP RNCKLIAIDR NTHMNHVYTF SRFTVKTKHA 
PKSFIPYKHL LDPQPKLAPE IDLSTPPETP PIHPSVLDQE DDVLAGRARH QFIQGVVTKL 
SSKEVTFVRP SEEDRPAFKD VAFKSVPAAN VDSKEVNMTY GEFDGPEEKI EYNYLLYALG 
STLPDPVNVW QPLSGQPRVT GDERKLGNKK RGLKFMAIQS EKFKAAGRIL IIGGGALGIQ 
YATDLKDVYP EKKITLLHSR TRLLPIYPIK LHVTVMEALT KMGVDVVLGE RVMTWPDEPE 
VLDGKTKYVT TDKGRTFEAD IVLPCTGQRP HVSLMAELDP ALISPMTGRI RVLPTQQVCP 
SRLASVENTE KQFSKSFMPT VTPPLTSSSA TSIGSDEDQL QTQKDYNHIF AIGDCAQTKA 
IQAGHTAFGQ GEVAARNILR LIEKEGEAGK INDEELEEYE APKPAIKLTL GIKNGVLVDG 
ESVTPNNTGE EDLHALLMWG LPNAVGMDIN E