Gene CNA04980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA04980 
Symbol 
ID3253268 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1316629 
End bp1317981 
Gene Length1353 bp 
Protein Length333 aa 
Translation table 
GC content48% 
IMG OID638252817 
Productperoxisome targeting signal receptor, putative 
Protein accessionXP_566938 
Protein GI58259051 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0414188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATACC TCCGCCTCTC TCTCCCTCCG TTTGCACATA ACAACCTCGC CTTCTCTCCG 
TTTTACGATC ATCATTTGGC TCTTGCTTCC GGTTCCAACT TTGGGCTAGT CGGCAATGGC
AGGGTGCACG TCGTCAAGAT GGACCAGCAG GTCGCGGGTG GATTGGGGCT GGTGAGAAGT
TGGGATACAG CAGATTGCGT GTATGACGTG GCTTGGAGCG AGATACACGA GTAAGTTGCT
CAGCTTGTGA GAACTGTCTG GGAGAAGCGA GATGTTCAGA CTGGGGGATG TGTTACAGTT
ATAGGAGATG TTGAGAGAAG GTGTTGATGA TGGAGACGGC AGCGACCGGA ACGTATAATG
ACCATCCATT ACTTATAGGA ATCAGATAGC AGCAGCTTGC GGTAACGGTG CCATCAAACT
TTTTGATCTC GCTCTCGAAG TAAGTTTTGT CGCCTCCGAT GGGATTGTCA TTTGGGAGAC
ATCACTCTTA TTTTTCGGTG GTAGGGACTA CCTATACAAG CTTGGCAAGA ACATACGGCT
GAAGTCACGT CCATCGAATG GAACAACATT GAAAAGGAAT TGTTTGTGAC TGGTTCATGG
GACCAATCTG TCAAAATCGT TCGTTTCCAT TATTATTCGT TTCATGCTCG AAAAAGTTTG
GGGTTAACAA AGACTTGCTG TGACCATAGT GGAACCCCAA TCGACAGTCA TCAATCCTAA
CCATACCTGC CCATGCAGGC CAAATATACT CCTCCACTTG GTCTCCTCAT TCACCAACCA
TTATCGCGAC TTGTGCTTCT GATGGGTTTA TCCGGATATG GGATACACGT ATTCTCCCCT
CCCCCATCCA AGAAATCTTC CCTCCCTCCG CCGCCCCTAA TCCAATGTCA TCACGTTCTG
CTGGAGAAAT ACTTAGCTGT GACTGGAATA AATATACTCC ACAGCTGCTA GCGTTCTCTT
CTCAAGATGG AGGGGTCAGT ACGGTGGATT TAAGACACGT ACCTCGCAAC GCAGAGAAGA
TGGCGGTAAG GCTAGTGGGA AAACATGGTT TACCGGCGAG GAAAGTGAAA TGGGACCCGC
ATAATGGAAC CAGATTACTG AGTGCAGGCT ACGATATGAC TTGTAGAGTG TACGTTCATT
TGTCTTATTT CGACACATCC TGTCGACTTC GATGCTGATT TTGATGTAGC TGGCAAACTG
ATCTGCCACC AGCCGCACCT TTAAGAGAAC TATTTAGTCA TCAAAACCAT ACGGAGTTTG
TAATGGCTGC AGATTGGGCC TTGTTTGACC CCGGATTAAT AGCTAGTGCG GGGTGGGACG
GGGATTTGCA TATGTATCGT ATCTAGCTGT TGT
 
Protein sequence
MQYLRLSLPP FAHNNLAFSP FYDHHLALAS GSNFGLVGNG RVHVVKMDQQ VAGGLGLVRS 
WDTADCVYDV AWSEIHENQI AAACGNGAIK LFDLALEGLP IQAWQEHTAE VTSIEWNNIE
KELFVTGSWD QSVKIWNPNR QSSILTIPAH AGQIYSSTWS PHSPTIIATC ASDGFIRIWD
TRILPSPIQE IFPPSAAPNP MSSRSAGEIL SCDWNKYTPQ LLAFSSQDGG VSTVDLRHVP
RNAEKMAVRL VGKHGLPARK VKWDPHNGTR LLSAGYDMTC RVWQTDLPPA APLRELFSHQ
NHTEFVMAAD WALFDPGLIA SAGWDGDLHM YRI