Gene CNA04780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA04780 
Symbol 
ID3253215 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1270604 
End bp1272089 
Gene Length1486 bp 
Protein Length315 aa 
Translation table 
GC content53% 
IMG OID638252798 
Productcarnitine/acyl carnitine carrier, putative 
Protein accessionXP_566873 
Protein GI58258921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00046365 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCCCCTCGC AGCTCGACAG CATATATATA CCAGCTCATC CCAGCCCATA AGCGGAGCTC 
CAATAGATAT CTAGACGCTA TAGCAGTACC GCAGATCGTA GCCAGCAGCC ATGTCCGACG
ACGCCTCTGA GATCGAAGCC GTCTCCAGAA ACGCTGGAAA GCAAACCGTC GACCCCGTCA
AGTCTTTCCT TTCCGGTGGA TTTGGTGGCA TGTGGGTGCC TCTATACCCA TGCACTTGCT
CTGCAACTAA CCAGAAGCCA GCTCCTGTGT CTTGGTCGGC CATCCCTTTG ACTTGACAAA
GACGCGTCTC CAAACAGCAC CTCCTGGCGT CTACACAGGT GCCATTGATG TCGTGAAGAA
GACCGTCAAG GCGGATGGCT TTCGAGGGTA CGTGTTTACT TGGTGCATAT CAGTCAGCCG
AAATGCTAAC AACCGACCAG AATGTACCGA GGAGTAACCC CTCCCATATT AGGCGTCACC
CCCATCTTCG CCATCTCTTT CTGGGCAAGT CATTCTTATT TGCTTGACAA CGTGTGGGAT
TCTTATTGAT AAACGCCGTA CAGGGTTACG ACCTCGGCAA GAGATTGGTG TACTCTTTCA
GCCCCGACAG AACCGAGCAA GCACTCTCCA TATCTGAACT TGCCTTTGCC GGTGCTTTCA
GCGCTCTCCC AGCCACCCTC GTCGCCGCCC CCGCCGAGCG AGTCAAAGTT CTCCTCCAAG
TATGTCTCCT TTTTCTTCTT CTTTTACTGT ATATCCCTCT GACATTTCAA ATCCAGGTAC
AAGGCCAAAG TGGAGCCCAG GCTTACAATG GTGTTTTTGA CGTCGTCACC AAACTTTACG
CCGAGGGTGG TATCCGTTCC CTCTTCCGAG GGACATTCGC TACCCTTGCC CGCGACGGTC
CGGGGAGCGC TGCCTACTTT GCCACGTACG AGTCCCTCAA AAAGATCTTG TCCGCCGCCC
CCGACACCTT GCCCGATGGG ACCAAGGCCC CGGCACCGCC TTTGAGTGTA CCGGCAATCA
TGACCGCAGG TGCAGGTGCG GGTATCGCCA TGTGGTCTCT GGGTATCCCT CCCGATGTGA
GTTTTTTTTT TTTTTTTTTC TTCATCCCTG CTTTCGTCGA TCGGCTCATT CATCACTTTT
CTCTCTCTCT CTCTCTAGAC CATCAAATCT CGTCTCCAGA GTGCGCCACA GGGGACATAT
ACCGGCTTCA TGGACTGTGC CCGAAAGCTT ATCGCTCAAG ATGGTGTGAC CGCTCTCTGG
AAGGGTTTCG GACCCGCCAT GGCAAGAGCT GTTCCCGCAA ACGTGAGTCG TCTGGACAGT
CCAATAGCTT GGCCGGGGCC AAGGACGGCG GGAAACTGAT ACTGAATGTT CATCTATAGG
CTGCAACGTT CTTGGGCGTA GAGTTAAGTT TGAAGATGAT GGACAAGTTG TGGTGAACGA
AAAGAGCGCG AGTCGTTGGG CTAGGCCGAT CATGCACACC ATGTAA
 
Protein sequence
MSDDASEIEA VSRNAGKQTV DPVKSFLSGG FGGISCVLVG HPFDLTKTRL QTAPPGVYTG 
AIDVVKKTVK ADGFRGMYRG VTPPILGVTP IFAISFWGYD LGKRLVYSFS PDRTEQALSI
SELAFAGAFS ALPATLVAAP AERVKVLLQV QGQSGAQAYN GVFDVVTKLY AEGGIRSLFR
GTFATLARDG PGSAAYFATY ESLKKILSAA PDTLPDGTKA PAPPLSVPAI MTAGAGAGIA
MWSLGIPPDT IKSRLQSAPQ GTYTGFMDCA RKLIAQDGVT ALWKGFGPAM ARAVPANAAT
FLGVELSLKM MDKLW