| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA04770 |
|---|
| Symbol | |
|---|
| ID | 3253217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 1267204 |
|---|
| End bp | 1270455 |
|---|
| Gene Length | 3252 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638252797 |
|---|
| Product | phosphoprotein phosphatase, putative |
|---|
| Protein accession | XP_566871 |
|---|
| Protein GI | 58258917 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00163033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTTCCATT CTCTTCATCT CCCACCCGAC ACCGCCTCCC CGTCCTGCTG GGACATTCCC
AGCACTCCTT CCACGACTAG TCCACCACTC TATCATCCAT CGACATACGC CATCCCAGAC
CCGAACAGTG CAAAAATCAC ATACCCACGT CCCACGTAGA GGAGCACTCT GCTGTCGTCC
CTACTCCTTG GTAATTCGTC TTCTCCATCT TAATGCTCAT ATCCACACTG TCGTGTGAGA
ATTGAGAAGA TTATTGGATA TTGCTTTCAG ACAAAAAGGT GCCTCTGGAT AATCTTATCA
ACGTCGGCAA GATGCCATCG ACTCCAACCC GTGCATTCCC CAACGAAGTC GCTGTCTTCT
CTAACTATCT TGTATTTACA ACCCTTACGC TCAAAGAAGT TCAGGCGCAT GCGAAGACAC
CATATGGTCA TCCGGGAAAC AAACGGGCTT GTTCACTGTT CACTTGTGAG TCTTGTTCCT
GAGATCGGTT GGTTCCTGCA TGGTCCTTGA GCGCCACAAG AGTTTTCATT GACCAAGTTC
AGTGGACGAC GATATGCGCT ATACGAGTTT CGCAATGGAC CACGGGCCAT TGAACCTTGC
GTTTACGTTT CATGCCTGCA TACGTATCCA TGAGAAACTG GAGGTTGGTT GTCCCATTTT
CGCGGTCAAG GACGAGCATT GACGCGCATT TTTGTTATGA ATAGAAGGCG AGAGAACGGG
GAAAACCTGT TTGTCTTTAT ACAACAACAG AGCCAAAGAT GAAGTCCAAT ATGATCCTCA
TTGCGGCTCT CTATTCTGTA AGTCGAATAT TCTTGATTGA ACGGTGATTT AACGTGAAAA
CTAGTTGATT GTCGACAAAC AACCCCCCTG GAATGCTTTT CGTCCCATTG CGCAATTCGA
AATCATGCCC TTCCGAGACG CCGGCAGTGG TCCAATGGAT TACGGTTTGA CCGTGCAAGA
TATCCTGTAT GGTGTGGAAA AGGCGATTGG AAATGGGTTG TTAGATCTTT CTTCATTTGA
TGCGGATGAG TATCAATATT ATGAAATGGT AGAGTGAGTT CTCCTTCGTC GGCTGGTGGC
AATGCCATTA TAGGGAAGAA GGATGCTGAT GAGAATAGAA ACGGAGACCT AAACATCCTT
GGCCCGTTTA TCCCATTTGC ATCCCCGACA GAAAACAGTT GGATCGAAGG AGTCTTGCAA
TCTCCATCAA ACGGACATAT CATTCACACT CCCGTCAAAT CCAAGACCAT TTCTCACCAA
CTCCGCTGTG TTCTGGATAT TTTTCAACGC GAAAACGTCG GCCTCGTCGC CCGGCTCAAC
GACGAGCTCT ATGATCGCCG CCATTTCCTT GACATGGGCA TAGAACACAT TGAAATGTTC
TTTGACGATG GCACCAACCC GCCCGACGAC ATTGTTCGCG AATTTATCCG ACTCGCTGAA
TACACAATTG AGCACAAACG GCAAAAAGTT GCTGTGCACT GTAAAGCCGG TTTGGGAAGG
ACAGGTGTTC TGATTGGAGC GTATTTGGTA TACAAGTACC AGTTTACGGC GCAAGAGGCA
ATCGGGTTCA TGAGGATTGT GAGACCCGGG ATGGTCGTTG GGCCGCAACA ACAATATATG
GTGTTGAATC AGCTCAAGTG GGTTGGATGG GTAAGTGTAA GAGTATGACG TGAAATGGCG
CGTACTAATC TTTTGGTAGG CCGCCAGGGA TCAGGCTCTG AGGGAAATTG CACATGCCTC
GTGTGTGGAA AGCAACCCGT CGATGTCACC GCCAGTGGAG ATTGTCATAA ACCCACATGC
TGGCCAAGAT ATCGAAACCC CAACTCGTAT TCGACCAATC ACTCGCTCTT CTAAACTCCG
TCCCCGGCGG TCCCACTCGT CCAGCAGTCT TGTTACAACC TCCCCCCGTC GTGGTGGGGA
TGCCGTTGGT CAGCCTAGAA AGCCTCGACA GCTTGTTGAA TCGACTACAG AAACAGAACA
GGAAGAGCTT AGGAGTTCTC AATCCCGTCT TCCGCCCAGC AGTCCACCTG TCGTCGCAGA
AGTACCTGCT GACCAAAAGG AAAATGAATT CAACCCCAGC ACCGTCTCGT CTCTTGGTTC
CATACGGGGG ACAAAACGTT CTGCCGCCCG GCCCTCATCC GGATACGAAC ACCCCAACTC
TCTTCCTCGA GTTTCGCTTA ATGTTCCGCC CTCGAATCTT ACGCGGGCCA ACTCCAATGT
CAGCATTGGT TCAGAAGGAT CCGTGGATGA AAGGGCGCCC AAGAGAAGGA CGGGATCATC
TCCCGAGGTG GAGGGAAGTG GCGCTATCGT ATCTCCGGTC TCCGAACCCA TGGTGACCGA
GCAGGTTGAG ACACCTGTTC GATTAACAGT CACCAAAAAG CTCCGTCTCC ACATCCACTC
CTCTCCGCCT ACTTCTCCTC CTGCGTCTAC GCCTTGTGTT CCCCGGGCTA CTCCACCCAG
CGTCAACCTT GCTGCTTCGA CAGAGGCACC ATCTACGCCC ACCCGAGTTC CGACTCGTGC
GATTCACGAG GACATGAGTG TTACAGCCTC TGTGAGGCGT ACAATGCCTG CTAAAAAGAG
CTTTTTGCCT GTCCGAAAAA GTGTCGAATC AAAATCATCA CCTGTGCGAG CTACAACCAA
TCCAGCAACT GCCCAGTCTC CTTCACTCTC TACCCGCAAT AGCGGCAGGA TCGCCAACAC
TCTGAACAAA TACGAAGGCA TTGCTGTCAA CTCTAACGGC AACGCCAAGA ACGTCAGGAC
CGCTACCCCG GCTTCAAAAA AGTTGGGACG TGGGGTGATG AAGAAGGGTG TGTTGACACC
GCCCAGGATC ACGGAGATGT GGGGACAGTT GAGTCGGATC GGGAGTTCGC CCCCTGCCGA
CAAGGAAAAG CAATAGGCGT GTAAGTAGAG TCTTTGTTTG ATTTCAATGG GGGCAAAAGT
GCTGACGATG GTAGGCTGGA TCAGCGCTGA GCGCCAAGTA ACGGTCCTTT TTCCTATTTG
CTCCTGTATA GATACATTAT GATCCCTTTA CGATACATGT TCTTTACGAT TTACGAACTT
TCTCTTCTAG ATACAATCTG TTTATCCAGT CAATTCAATG TCGCTCTTTA TTGGGAACGT
ACAGCTCCCG AACTGGGTTT TATCCGCTTG GAGTCATCGC CAACTTTTGA TGGATTTGGC
ATTCATCCAC CACATTCCTG TCTCTCCTCT ATACTGGGTA GTAAACTGTG TGTATAGGCA
TGTAACTCGA AA
|
|---|
| Protein sequence | MPSTPTRAFP NEVAVFSNYL VFTTLTLKEV QAHAKTPYGH PGNKRACSLF TLDDDMRYTS
FAMDHGPLNL AFTFHACIRI HEKLEKARER GKPVCLYTTT EPKMKSNMIL IAALYSLIVD
KQPPWNAFRP IAQFEIMPFR DAGSGPMDYG LTVQDILYGV EKAIGNGLLD LSSFDADEYQ
YYEMVENGDL NILGPFIPFA SPTENSWIEG VLQSPSNGHI IHTPVKSKTI SHQLRCVLDI
FQRENVGLVA RLNDELYDRR HFLDMGIEHI EMFFDDGTNP PDDIVREFIR LAEYTIEHKR
QKVAVHCKAG LGRTGVLIGA YLVYKYQFTA QEAIGFMRIV RPGMVVGPQQ QYMVLNQLKW
VGWAARDQAL REIAHASCVE SNPSMSPPVE IVINPHAGQD IETPTRIRPI TRSSKLRPRR
SHSSSSLVTT SPRRGGDAVG QPRKPRQLVE STTETEQEEL RSSQSRLPPS SPPVVAEVPA
DQKENEFNPS TVSSLGSIRG TKRSAARPSS GYEHPNSLPR VSLNVPPSNL TRANSNVSIG
SEGSVDERAP KRRTGSSPEV EGSGAIVSPV SEPMVTEQVE TPVRLTVTKK LRLHIHSSPP
TSPPASTPCV PRATPPSVNL AASTEAPSTP TRVPTRAIHE DMSVTASVRR TMPAKKSFLP
VRKSVESKSS PVRATTNPAT AQSPSLSTRN SGRIANTLNK YEGIAVNSNG NAKNVRTATP
ASKKLGRGVM KKGVLTPPRI TEMWGQLSRI GSSPPADKEK Q
|
|---|
| |