Gene CNA04290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA04290 
Symbol 
ID3253366 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1153779 
End bp1155229 
Gene Length1451 bp 
Protein Length356 aa 
Translation table 
GC content48% 
IMG OID638252749 
Productvacuolar ATP synthase subunit d, putative 
Protein accessionXP_566778 
Protein GI58258731 
COG category[C] Energy production and conversion 
COG ID[COG1527] Archaeal/vacuolar-type H+-ATPase subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGTCTTCTG GGATGGGTAA GGAGTGTGTA TCCTCCAATT CAATAACCAA TAGCCCGAAT 
AACTGCCAGA ATAAAGACCT GCGAGTCAAC AAAAAACAAA TACTTTAAAC AGTCCATTCT
TCGTTGATCA CCGACCACAA GATATCCTTT GCAGGGCGCT TTCGTATCAC AGTGTGCGAT
AACAAAGATG GAGGCTCTCG GCTTCAATGT GAGCTATCTT ACGATGTGCC TCAGAAATAG
ACTGACCTAT TTCTGTCTTT AGATGTCCTC TGGTTACCTC GAGGGTGTGG TCAGAGGGTA
CAAAGGAGCG TTGCTCACCC AATCCAACTA CCACAACTTG ACACAGTGCG AGAACCTTGA
GGGTGAGTGA TGATCATTGC AATGTTGGTT TCAGTTGACA ATCCACAGAC TTTCGACTCC
AGCTCTCTTC TACCGACTAT GGTAGCTTCC TGGCCAACGA GCCTCTCCCC TTATCAACCT
CCACCATTGC GGACAAGGCT ACTGAAAAAC TCGTGGCTGA GTTCCACTAC CTTCGGACTA
ATGCCGTTGA GCCCCTGGCG ACTTTTATGG ACTACATCAC CTATGCGTAT ATGATTGATA
ACGTTATCTT GCTTACGCTC GGGACGTTGC ATGAACGAGA TACGCACGAG TTGTTAGAAA
GATGCCATCC CCTGGGAGTT TTCGACACTA TGCCGGCATT GTGCGTAGCC ACCAATGTGG
AAGAGCTGTA TCACAGCGTG CTTGTAGAGA CTCCATTGGG TGAGTATAGG AAGTTATTGT
CAACATCATT ATATTGACAA TATTCCAGCA CCCTACTTCC AAGACTGTCT ATCAGCGCAA
GATCTTGATG ACCTCAACAT TGAGATTATC CGTAACTCCT TGTACAAATC CTATCTCGAG
GATTTCCACA AATTCTGCCA GACCCTTCCG GCTCCCACTT CTGAGATCAT GTCCCGTATC
CTTGCTTTTG AAGCCGACCG ACGTACACTC AACATTACCA TCAACTCCTT TGGTACCGAG
CTCTCCAAAG AGCAGCGAGC GAGGTTGTTC CCCTCTATCG GCCGCCTCTT CCCCGAAGGG
AACAATGCGC TTGCCAGAGC GGATGATATC GATGCAGTAG TTGCTGCCGT CGACCATATT
GCCGAGTACA AAGCCTTCTT TGACAAGGCG GGCGTCACTT CTGGCGGCGG CGCCGGTACG
GATGAGGCGA GTTCGAGCTT GGAAGACGAG TTCTTCAAAC ATGATGTGGA TTTGAACAAG
CAGAGCTTCT TACAGCAATT CCAGTACGCC GTGTTTTATA GCTTTGTGAA GCTCAAGGAG
CAGGAAGTGA GGAATTTGAC ATGGATTGCA GAGTGCATAG CGCAAGATGC GAAGGATCGT
GTGAATGATT ATATACCAGT ATTCTAGAAA GTTTCAAAGG GTTATTATGT ACTTGTTGGA
TTCGTCACCT C
 
Protein sequence
MEALGFNMSS GYLEGVVRGY KGALLTQSNY HNLTQCENLE DFRLQLSSTD YGSFLANEPL 
PLSTSTIADK ATEKLVAEFH YLRTNAVEPL ATFMDYITYA YMIDNVILLT LGTLHERDTH
ELLERCHPLG VFDTMPALCV ATNVEELYHS VLVETPLAPY FQDCLSAQDL DDLNIEIIRN
SLYKSYLEDF HKFCQTLPAP TSEIMSRILA FEADRRTLNI TINSFGTELS KEQRARLFPS
IGRLFPEGNN ALARADDIDA VVAAVDHIAE YKAFFDKAGV TSGGGAGTDE ASSSLEDEFF
KHDVDLNKQS FLQQFQYAVF YSFVKLKEQE VRNLTWIAEC IAQDAKDRVN DYIPVF