| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA04230 |
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| Symbol | |
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| ID | 3253378 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 1135541 |
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| End bp | 1137029 |
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| Gene Length | 1489 bp |
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| Protein Length | 439 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638252743 |
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| Product | general RNA polymerase II transcription factor, putative |
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| Protein accession | XP_566766 |
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| Protein GI | 58258707 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG5333] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.333957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACCAACAGCA GCTGCAGTTA GATGTCTTCC AACTTCTATA CCTCCTCTCA TAACCGCTAT
TGGCTCCTGA CTCGGCCGTC TCTTCTGGAA TCTCGGCAAA CAGACCTCAA ATACTGCACC
TCTCGCCAGC TATATTGCCT CTTCATCTTC TTCTCTCAAC TCATCCAAAA ACTCGGTAAA
CGACTGCTGC TGAGGCAAAT ACCGATAGCC ACCGCATGTG TGTTTTTCAA GCGGTTCTAC
TTCAAGAACA GTTTGTGCGA AACGAATCCA TATCTGGTGC TCGCGGCTTG CATTTATGTG
GCAGCCAAAG TAGAGGAGAC TCCGGTACAT ATCAAGAGTG TCGTAAGTGA GGCCAAGTTG
GTTTTCCATG GTGAGATTTC CCTTTAGGCT CTCAATTGTT ACATTTCCTG AAGTCGGGCG
ATCAATGAAA CAGAACACAA CATCAAAATG TTCCCTGCTG AGACCAATAA GCTTGGAGAA
ATGGAGTTTT ATCTACTGGA GGATCTCGAT TTCCACTTAG TGGTCTTCCA CCCATATCGG
GCGCTACTCC ATCTCACCGG GAGGGAGTCT GCAGACATGG GAAAATTTGA GAAGTCCAGA
GTTCAAGAAG ATATGGAAAT ACGAAAAAAA GAAGGAGATG CCAAAAAGAT GCGAGAAGAA
GAGGCGAAGA AGGCGAGCAG TAAGGGACAG CAACCAACAG TTGGACAGGC ACTTGAAAAA
GAGGGGGAGC GCCTCGAAGA GGCTGAGGAA ACCAGGATAA GGCGTCTAAT GAGTAGAGGG
ACAGGCGAAG GTATGATGGA AGTGGACGAG GGTGTTTTGC AAATATCATG GTGAGTGTGA
TTATCGACCC CAATTTGGCA TCTAGCTGAT AGGTCCCAAT AGGTTCATCC TCAACGACTC
CTATCGCACC GATGCCCCTC TGCTATATCC TCCTTATATA ATCGCTCTCT CGGCAATATA
TATCGCCTTC TGCCTAACAT CCATGTCGAA TTCCTCTGCC CGCACCCGTG CGTCTTCCAC
TCAGCGACCG GAACTCTTGC AGTCGGCTTC GATTAATGAA GGATTGAATT TGCTTCCACC
GCCTAAAAAT GCCGCAGAAT TTCTGGCTGG GTTTCAAGTC AGTTTACCAA TGCTGTTTGG
TTGCGTGCAA GAGATTATTG GACTGTATCC CGTATGGGAG GCATTTGAGC CAACGGTGAT
GAGGAATTCC CAAGCACAAG CCAAAACGGG GAATGCAGCA GCACCTGTCC CGGCTGCAAC
TGGGACAAAA ACCGGGCAGA ACAACGATTT AGTCCAAGAC AAAAAGGACA AGTTCGGTTT
GGAGGAGGCT GAATCTCTGG TACGGAAAAT GATCGAGGAA AGGATGATAG ATTTAGGTCA
TCCAGATAAT GCGGGTGTTG AAAAGGCTTC AGGTACCGGC CCCTCCAATG TAGCGGGTAA
AAAGCGCGCA AGATAGCATA GATCATGTCT TGCTCATTTT CGAGTGCAC
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| Protein sequence | MSSNFYTSSH NRYWLLTRPS LLESRQTDLK YCTSRQLYCL FIFFSQLIQK LGKRLLLRQI
PIATACVFFK RFYFKNSLCE TNPYLVLAAC IYVAAKVEET PVHIKSVVSE AKLVFHEHNI
KMFPAETNKL GEMEFYLLED LDFHLVVFHP YRALLHLTGR ESADMGKFEK SRVQEDMEIR
KKEGDAKKMR EEEAKKASSK GQQPTVGQAL EKEGERLEEA EETRIRRLMS RGTGEGMMEV
DEGVLQISWF ILNDSYRTDA PLLYPPYIIA LSAIYIAFCL TSMSNSSART RASSTQRPEL
LQSASINEGL NLLPPPKNAA EFLAGFQVSL PMLFGCVQEI IGLYPVWEAF EPTVMRNSQA
QAKTGNAAAP VPAATGTKTG QNNDLVQDKK DKFGLEEAES LVRKMIEERM IDLGHPDNAG
VEKASGTGPS NVAGKKRAR
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