Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA04190 |
Symbol | |
ID | 3253361 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 1125636 |
End bp | 1128695 |
Gene Length | 3060 bp |
Protein Length | 776 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252739 |
Product | palmitoyltransferase, putative |
Protein accession | XP_566783 |
Protein GI | 58258741 |
COG category | [R] General function prediction only |
COG ID | [COG5273] Uncharacterized protein containing DHHC-type Zn finger |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGTATGTTCT CAAGCAATCC TGGACTCACC GAGAAAGAGC AACAAGTACA CCACCAGGCA GGATAAAAGG CGCTCAAAAC CATACCCAGA ACTACAGGTC GCAACGCACG AACCACCTAT CTTATGGACC AAGAGATGAC TACAGTGGCA TCTCCAGACA TTAGGGTGAA AGCGACAAGC CCAGACTCAA ATCGAGCTGT ACTTGAACAA TCAATAGTCC TGTCAGATTC AGGCAGGTTA GATGAAGGAA GCTCAATTCG AGGCGGAGAG CTTGAAAGGG ACAGTCAGGA GGTCGGCCGG GAAACTGTAC GAGAGCCTTT GATGTGTCAC GACGTATGTC CTAGTCCTTT TTCCATTATA TCTTTCGCAA TTTGGCTAGC GAAGTAATTG CTGACATCTT TCCATAAATT AGCTCGACAT CCATGCACTG GCTCAGAGGG GCGATACGGC AGCCATCGCT GCTATGCTAC AAGAGAACCC TTCACTAAAC CTCTCTGCCA GAGACGCTCA AGATGTGACA CCTTTACACT GGGCCGCTAT TAACGCGCAC ATGGGAACAT GTAGACTCCT AATAGACAGT GGCGCTGATA TCGACGCGAT TGGTGGTGAG CTGAAAGCTA CTCCTTTGCA ATGGGCTGCA AGGTAAGCTC CCCGATGCGT CCGAATACAT TACTCATATG ATTATATTTC GTAGAAATGG ACATTTATAT GTTGTACATC TCTTAATATC AAGGGGTGCT GACCCAAATA TACATGACTC TCAAGGCTTT AATACGTTGC ACCTCATCAC TCATTCCAGT GCCGTCATGC CGCTGCTATA CATGGTGAGC GAACATTGAT CACCATACTT GGACTTAACG CGCTGACATC AATATGTAGC TTCATCAACC GGTAGCTATC GATGAAAAGG ATACAGATGG TCATACTGCT CTCATGTGGG CAGCTTATCA AGGCGACGCT CTTTCAGTCG ATCTCCTCAT TAGACACGGT GCTTCAGTGA ACTCGACCGA CAATGCGGGT ATGACTCCTC TTCACTGGGC AGCGGTGAAA GGCAACAAGG TCTCCATCAT GCACCTTGTA GAAGCCGGTG CTAGTCTCGA TGCGAAAGAA GAAGCAGGGA AGACTCCCAG AGATATGGCA GAGGAGTTGA GGGGTCTAGT GCCGTTCCAA AAGGGTCTCG AGGAGGCAGG GTGGAGCATT GATGGTGTGA AGATGGAAGG CAAATTGGGC CCTGTGAGTG AGGCTACCAG TGTCTCATGG ATCCAGCTGA CCGTTAATAG AGAAATACCA TCCTGGCTAT CTTCTTGTTG CCCATAGCAG TGCTATGGCT CATCTTCAGT ACTTTCAAGT GGTTACCGGT ATACGTGGGC GTCCCGTTTG CCATTGCTGA ATTCATGGGC ATGCAATACG TGAGTCAAAT AAATATACCC AAGACAATCG ACTGATCATC ACTCCAAAGA CCGTCGTCCT TGTTTTATTG GGCCATATCA AGGCCCAAGA CAAAGTTTCC ACATCCAACT ACTTTGCATC TATCATCACC GCCAGTCTCA TCTGGGTAGG CTACTGTTGG ATTTCTAGGT TCGCCGTCAA CACCCCGGGA TACGCATTTA GCAACCTCGG CTTTATAATC ATGTTTGTTG GCTGCTGTTG GACTTTCTGG ACAGCCATCG TGACAGATCC TGGATTTGTG CCGAAGGGAC AGCAGGATGC GGAAATTAAG GAAGTGAGTA TAGCGGCAAT ATGTGCATAA GAATACTTTT AAAAATCCCT ATAGGTATTA GAAGACCTTG TGGACGCAGG AAGACTGAAT GGGACCAACT TTTGTATCGT CTGCATGGTG AGTCTGTGTG CTATCTGCCT TCACATTAGG GTGATATTTA TGTTTACAGG CTCGGAAACC CTTACGCTCC AAACATTGCC GGACCTGTAA TCGATGTGTG GCCAGGTTTG ATCAGTATGT ATCTCTAGTT GTTTGAACAA GTATTACCTG ACAGCACATA GCCACTGCCC TTGGATTTGG AATTGCGGTG AGTTAATTGC AGGCCACATC CGTTGTCTCA AGGCTGATAA GGTCACAGTG GGAGCGAAAA ACCATCGATC CTTTTTGCTA TTTGTGTTAT TTTTGATTGG GGGAATCATT CTCTTTATCA GACTTACTAT TGCCTGTGAG TTGCTGTTAT ACTTTGAATC ATCCGTCTAA TGTTTTCATC GACTATAGAC ATCCAGCAAA ATGCCCCAGA ATACATTCCC ACTCCTAATC CAGGATTAAC AACATGTGAT ATCTCTACAA CTCTCTGCCA AGCAGGCGAT TTCGATCCTT TTCTTCTCTG TATGGCGCTT TGGAGTACCC TTCAACTCAC GTGGACTTCT GTTCTGGCCA TTTCTCACCT ATGGCAAGTC TCTCGGCAAA TGACAACATT TGAAGTGTCC AATCTTGGCC GATATGGCTT CATGGGTGGG CGAGGGGGAC AAAGCTTGAG AGACCAAAGC GGGGCGATGT TAAAGCAGGC TGCAGCTGTC GGGGCGGGCA TCGGGATGAG TGGAGCTGGA GAGGAAGCGG CTGGTCCCCC GGGTGCCGAG GCTGGGCCAG AGGGGAACGC GTTACTTCCT CCGCCTGGCG GACATGTTCA TGGACCTCAA TGTCGACATG GTGATCATGC TCGTGGCCAC AGCCATGGCG TGCTGCATAT ATGCGGAGCT CTTTGGAAGA CATTGACAGG TCCGCTGATG ACTATCTTGG GACTAGATAG GTTTACGAAG GGAAAGGCAT TGGGGGGAAT GAAAAGAGCT GGGAGAGACC AGAATCCGTT TGATATGGGC ATGGTCAAAG TAAATTCTAC AGACCCCTAC CGCATACAAA GCTATAAACT GACATACAAT TAGAATTGCA TAGATTTCTG GTTACCAGAT AACGATGTCG ATTATATGAC GGTTTACGAA ATACCTCCAG GAGGTTGGAG GGCTTATAGG CGAAAGCTTG CGATGGATAA GAGAGTACCG GGTGGGAAAG GACGTTATGA GGTCGTTAGC GAGCAAGAGG TATAGGGTAA TGGTATGCAT
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Protein sequence | MDQEMTTVAS PDIRVKATSP DSNRAVLEQS IVLSDSGRLD EGSSIRGGEL ERDSQEVGRE TVREPLMCHD LDIHALAQRG DTAAIAAMLQ ENPSLNLSAR DAQDVTPLHW AAINAHMGTC RLLIDSGADI DAIGGELKAT PLQWAARNGH LYVVHLLISR GADPNIHDSQ GFNTLHLITH SSAVMPLLYM LHQPVAIDEK DTDGHTALMW AAYQGDALSV DLLIRHGASV NSTDNAGMTP LHWAAVKGNK VSIMHLVEAG ASLDAKEEAG KTPRDMAEEL RGLVPFQKGL EEAGWSIDGV KMEGKLGPRN TILAIFLLPI AVLWLIFSTF KWLPVYVGVP FAIAEFMGMQ YTVVLVLLGH IKAQDKVSTS NYFASIITAS LIWVGYCWIS RFAVNTPGYA FSNLGFIIMF VGCCWTFWTA IVTDPGFVPK GQQDAEIKEV LEDLVDAGRL NGTNFCIVCM ARKPLRSKHC RTCNRCVARF DHHCPWIWNC VGAKNHRSFL LFVLFLIGGI ILFIRLTIAY IQQNAPEYIP TPNPGLTTCD ISTTLCQAGD FDPFLLCMAL WSTLQLTWTS VLAISHLWQV SRQMTTFEVS NLGRYGFMGG RGGQSLRDQS GAMLKQAAAV GAGIGMSGAG EEAAGPPGAE AGPEGNALLP PPGGHVHGPQ CRHGDHARGH SHGVLHICGA LWKTLTGPLM TILGLDRFTK GKALGGMKRA GRDQNPFDMG MVKNCIDFWL PDNDVDYMTV YEIPPGGWRA YRRKLAMDKR VPGGKGRYEV VSEQEV
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