Gene CNA03850 details

Gene Information

• Locus tag: CNA03850
• ID: 3253418
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: +
• Start bp: 1034461
• End bp: 1036463
• Gene Length: 2003 bp
• Protein Length: 447 aa
• GC content: 48%
• IMG OID: 638252704
• Product: pyruvate dehydrogenase (acetyl-transferring), putative
• Protein accession: XP_566723
• Protein GI: 58258621
• COG category: [C] Energy production and conversion
• COG ID: [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCTTCCATT ATTCTTATAC CATCTCAGCC GCATACAGAT CATTCCCATG CTCTGAGTGT 
TGCAGTCTGC AAGTCGGCTC AGACGGAAGA AGAAACAACA CAACGACTTC CATATCATTA 
CTTCACCCCG CTCTTCAGTC ATCTAGCCGT CGGTTTCCCC ATAAAAGAGC CATCCGCCAC 
TCTCCAGGAT GACATTGTTG ACTGGTTCTC GCATTACACA GTCGTTCTTA CTCACAGTGA 
AAACGAGAAA ACCCCAGTGT TTATGTCTCC TCCAATCTGA ACAAGGAAAA CGTATGTCCA 
CAAATCATGC AGCCGTTCAC AAAGGGAAAC CACCTCCTTC ACGATCTGCC CCTGCTATCA 
TCGATATGCA GAGTACGACG GAAGAACCAC CTTTAGGGGA GAGTGAGCTT TTTCTTCGCA 
CTCGAGATGA AGTAAGCTCT GGCACATGAT ACAAAACACT ACTACTTCCA GGTACACTGA 
CCACTTCAAA GGCTTTGAAT ACTCCCGGCA TGAAGTTCGC AGATGGTCAT GGCCTCAAAG 
GACCTACAGG GAAAGGCCGA CAGACAAGAA AGATGAATCT CTATCAAGCC ATTCGTGACG 
CCCTGGGGTG AGTATATATC AACCTTTTTA GCTTATCTCC TCATCCATCA TTTTCAGCAC 
CGCCCTAGCC AAGAACCCGA AATCTTTTGT ATTCGGCGAA GATGTTGAAA CAGGAGTGTT 
TAGATGTACC ACGGGCTTAG TAGATGAATT TGGTGGGTCC TTGTGTCAGT GACAACGACA 
GCACATCTTA TAAAGGACGG GCTTCCTGCA GGAAAAAGAC GTGTATTCAA TACACCTCTC 
ACGGAGCAAG GTATTGCTGG CTTTGGCATC GGATTAGCAA GCGTAGGCGG ATGTGCCATT 
GCCGAAATAC AATTTGGCGA TTATGTAGGT GCCTCATACC AGGGTCACGC TGACGTGAAG 
ATATTTCCCG CTTTTGATCA ACTCGTCAAC GAGGCAGCAA AACAAAGATA TGCCAGCGGG 
GGCTCGTATC CACCGGTTGG CGGAAGCCTT ACCATCCGTG CCCCTATAGG TAGCGTGGGG 
CATGGGGGCT TATATCATTC ACAAAGCCCT GAAGGATTCT TTCTTGGTGC AGCAGGACTG 
AAGATCGTCA TCCCGCGTTC ACCCATACAA GCCAAGGGAT TGCTTTTGGC CGCCATTCGA 
GACCCGTCTC CAACCCTGTT CTTTGAACCT AAGATTCTGT GAGTTCGGCC ATTTAAACTT 
GAACTGATAA CATATCTTTT TTTTAGTTAT CGAGCGGCAG GTGCGTTTAT AGCAAGGTGC 
TCAACTAAAA CTGACAGTTC ATGGGGGTCG TTATATAGTG GAGGAGGTTC CTATCGATGA 
CTACACCATT CCATTGGGAC AGGCTGAAGT TATTCGCAAA GGCGCAGACC TCACCGTAGT 
GTCCTATGGT ACACCTTTGC ATATCTGCTG TAAGTGTAAT GATGTGATGG ACGAAGCGAT 
AATGACACTT CCATGATAAA GTGCGAGCAA TCAATATGCT TCAGCAACCT CCGTCGAGCA 
TTTTAGGTTC ACTTCCCCCC GGGCTTCGCC CTCCCCAGCC GGCTCCTTCT ATCGAATTGA 
TTGATCTTCG AACCATTAAT CCGTTGCCCC TGGAAGACTT GGTGTCCGCC GTGCGAAAAA 
CTGGAAGATT AGTCATAGTC CATGAGGCTG GTCGAAGCGG GAGTGTGGGC AATAATATCG 
CAGGCGAAGT GGGCAGAAGA GCATTTGAAT ATCTTGAAGC ACCCGTGGGA GTTGTTAGCG 
GATGGGAGTA AGTCCTGGCG ACGATTCGAC GATGGGGTAG CGAAAACTGA TGGACTTCAG 
CACACCGGTG CCTTTATCAT TCGAGCGATT TTATCAGCCT GATGTGATAC GGGTCTTCGA 
TAAATTAGTG GAAACATTGT CTTATTAATC CTGCTGCCTG CTGCAGTCGA TGTATAGAAA 
CGCTCACATA GCAACGATAA AGA 

 

Protein sequence

MTLLTGSRIT QSFLLTVKTR KPQCLCLLQS EQGKRMSTNH AAVHKGKPPP SRSAPAIIDM 
QSTTEEPPLG ESELFLRTRD EALNTPGMKF ADGHGLKGPT GKGRQTRKMN LYQAIRDALG 
TALAKNPKSF VFGEDVETGV FRCTTGLVDE FGKRRVFNTP LTEQGIAGFG IGLASVGGCA 
IAEIQFGDYI FPAFDQLVNE AAKQRYASGG SYPPVGGSLT IRAPIGSVGH GGLYHSQSPE 
GFFLGAAGLK IVIPRSPIQA KGLLLAAIRD PSPTLFFEPK ILYRAAVEEV PIDDYTIPLG 
QAEVIRKGAD LTVVSYGTPL HICLRAINML QQPPSSILGS LPPGLRPPQP APSIELIDLR 
TINPLPLEDL VSAVRKTGRL VIVHEAGRSG SVGNNIAGEV GRRAFEYLEA PVGVVSGWDT 
PVPLSFERFY QPDVIRVFDK LVETLSY