Gene CNA03060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA03060 
Symbol 
ID3253411 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp797390 
End bp802241 
Gene Length4852 bp 
Protein Length1250 aa 
Translation table 
GC content47% 
IMG OID638252637 
Producthypothetical protein 
Protein accessionXP_566730 
Protein GI58258635 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACT CTGTACCACC GGCAACCTTT CGCCGGATCA ACTCCCTCCC ACTTTCTCAC 
TCCCACTCGC CGACACCTAC TGACAACGCG TCCAGTGGTT GGGTGACCAC CACGTCTTCT
TGGACAAGCT CTACAAAAGA TCCGCCAAGC ACACTTGATG TGTTAAGCAA GGGAGGAGGC
CCGTTGGCTT GGACAGAAGT AAGGCATAGA TTACAGGAAG GAGAACATGT AGATGTCGAT
GGCGAGGGGA ATAACGGTAA ATTCACATAC AAAGGCTTAA ATGAAACTTG CAACTGATCA
GAAATGCAGT GGGTCACTGT AGTCAAGCTG TCATACTATC ATGTCTTCAT CTCGCGCATG
AAATGGCTTT GCGAGAAGTA GGCATGTATG CATGGACTGT CCCAGCTGTA AAAGATCCAA
CGGGCAGCAT GATGAAGATT ATGAAACGTA CGTTAACAGC TGTCTGTCAA GTATACTTTC
AAAAAGAAGA ACAAGAAGAA AGGAAAGCTG ATGAAGGACT TGAAGAGTAC GAAAAGCAGA
TAAAGGCTAT GAGCAGGCAT GCAGATCTAA GGTGCCGTTC CGTACGTGGT TATCCCACAT
ATCTGGAAAC AAGATTTATG CTAAAATACT CACTTAGGTG CCAGATCCTT CCAAACTCTC
CATCCAACAC CATCTTCAGA AAGCCCGACA GGCCGCAGGT CTCAACAGCT ATGTCGCGGT
CATCTATAGC GGCCATGGAA TCCAAGAGCC CCCAACAGAA GCTGGGGAGC TGTGGTGCTA
TGATAAAAAT TTTGAAGAGT GTTTGCAGTC TGGGTGTGGC CCTTCTGAGT AAGTACAAGG
TCGTTCGATG ACTATGGAAA AAGGTAACTC GATCAACTTT CATAGGTATA TCCCCATTCT
TTTGTTCGAC CTCCTCACCT GGGCTGGTGC TTCGACATGT TACGTCTGGG ACTGCAAAAA
CGCAGGTCGA TTTATTCGCG CCGCCAAAAC AGAGGCAGAG GAGATTGACT CTCAGCTCCG
AACGGCAGCC GCTCAAAATC CGTCAGTAGC AGAGACGCAG CCGGCAACGT ATGCTAAACG
GCAGATACAC TTCGCTGCCT GTAGCACAGA GCAAGTTCTG CCCAAAGTCA AAGGTTTACC
TGATGACTTA TTCACTGCCT GCCTGACAAC ACCATTGAGG ATCGCTTTGT TGTTCCACAA
TTTACAGTGC TTTCCTCTTA CTAGAAAGAA TGCCGAGAAA GCCACCATAA AAAGTCCCGC
TTATATGGAC GGGCTTTGGG AGAACATGAG CCAAAGTCTG AAAGATCGAT TGTGGTCGGA
ATTGACGGCA ATTCTGCATA CCATTGCCTG GCAAACACTC GATGGGTCAG AGTATCAGAA
ATTATTTGGA AAATCGGGTG ATGTGGTCAA CAATATAGCA AGCGGATTCT TACTCTCGCA
AAGGGTTCTC GGAGCATTCA AAGTGACCCC TGAGTCTGTT CCGAGCATTC CGTCTTCAGT
TTCCAACCAT GCCTTGTGGA CAACATGGGA TCTTATCCTT GACAATTTGT TCGAACAATT
GCCAAAATAC TTCGATGACG CTCACCCCAA TGTCACATGG GGAAAAAGAT CTCAAACTTG
TCTCTTTCAT GGCTGACCAG CTCGAGAGTA TCACCACGGC TGGACAAAGC TTGCTTTTCA
CTGAGACACC GAAATCTGGG ATGATGCCCG GCCTGACTAG ACTGCCTATC ATCTGTAGAG
CATCAATGAC AGAAGAGTTC AGAGTTCAGG CTTGTTCTGC TCTGGATGCT TGTCTCAACG
CGCTTGACGC GCGGGGCCTG GCCCGTGCCG TACAGGGTGG TGCTCTAGAT GTGGCAGTTG
AACTTCTCGC ATTGCAAGAT GAAAGGATCA AGGATCAGGT TATCAGTATA TGGTCATCTC
TTGTAAAGTA TGACTCGTGC GTTTTGGCGC TTGCCAAAGA GGGCCTCACA GCTGATAGGT
TGACGGACGT TCCAGCCGTT AAATTCTTTC TTATCGTGTT GCAGGAGAAC CTCGCCCATG
ACAAGTTGTC TCCTGATGCA GGAGACTCTG GTCCGGATAC CCAAGAAGAT TGTTCAGATT
TCAACCTCGT TCCCACCGTA CAGATTGCCG CTGTCTTATC GACCATCGCC AACTTCGTTG
TTGGTCGCTC TGCACCGCGT TTCGTGTCTC GCTCCCTGAA CATGGCAAAT ATCATGCTTC
ACTCCTCCTG TGATCTCATT CGTCAGTGGG GGGCTCTGCT CGCCGCTGAA GTGCTGGGAA
GTCTTAGTAT ATCAGATGAA GAGCGCTTAT CCGAAGAGCT AAAAGGAGAG CTCTTGCGTA
TGGTGGATAG CGGGAATGTA GAAAATCGGG CGGCAGGAAT ATATGCTTTG TCAAGATGGC
TGCCTGTCGG AGATGAATGG GGAGCATCAG AGCTAGAAGG TATATTGGAA CTCTCAGACC
ATTTGGTCAA GCACAGCAAA GTGGAAGGAT CCCCTTTAGT AAGACGGGAG CTGGCTGAAG
TCTTTATCCA AATACTTAAA TCTGCCAAAG GCTTCACTGC AATGGCCCTC TGGACTCAGT
TGCTTGGATA TGCTCTCGAC GCTCGACGTC AAGACATATC AGTAGCTGAA AAAGCTATCA
TAAACCTTGG GATGAACCTG AAGATGGCAC CGAAACAAAA GCTTTTGCTG AATAGGATAG
CAGCTATCCT GAGCGCCGTG TGTGTGCAAC GGTACGATCC CGATCCTATG GTAGCCAAAA
TAGTTCATCA ACCTCTGTGC AAAGCTCTCG ATATGCTGAG GTCTCAATCC CAGGAAAGTA
AGAAGGATGC CAACGTCTGG AGTGAAATTC AATCTGCGAC ATTCCTCTCA TCGAAGAACA
AGCCAGAATG GACCAATGAG ATGTTTGAAA CAATTCTAGC TGCCAGTGAA AGGGTCAAGG
AGCTCTATCA AGGTACATCT TCTGGGAATG ACCCTTGTAG ATTTACAGCC GAAAGGCCTC
AGCACGCCAA GGAGGCCAAA AGCAGGAAAA GAGTGAATCA TGGCTTGTTC GAGAGGAATA
AAAGGGCGTT ACAAGCTCAT ATTACGGTGA GCCTAAGTCT AACATGAACC TTTTCAATGG
CTGAAGCAGT GTTCAAATAG CAAGCTAGGC GAAAGGCAGA AATCACATCC CATGATAGTT
CTCCAATCAA ATCAACGTCT TCTGGCGATA CCTGGACTAT GAGACATCGC GTTCTAGAGG
ATTCGCTCGT AATAGCCGAA CAACAGGGTA TGTAATAATA ATTATAACGC TACATGTCAT
TTATACTTAC GCCGGTGGCG TACCAGTGGG CTTGCCATGG AAATGGTCTA TGAAGGATAT
AATATGCCCT GACCCATGGA CAACATTGAC CTTCCACTCG TTTCACAGCA CAGTTATGTC
TTGCAATAGA GATCATGATC TCTTGATGTG GGACTGGAAC TCATCAAGAA AAATAGGTCA
TGTCAAGCTC AACTTGGCAT CACACACCAG TATAACTTCT GCAAGGTTTG TGAACGAGTT
GCACGAGCAA ATCGTCATTC TAGCTGAAAT CTGTACGCAT TTTTACATAT CTTCGTAATG
TCAAGCGTGC TGACCCTTCA CTAGGTAATG GCGATATTCA CATCCTCGCA GGTCCTCAAG
ATGCTAGCCG CATCAAGCCC ATTGCCAGCT TTCAAGCGCT AAATATGCAC TCGTCGCGGA
ACATGCTGGT AGAAGATGAA GATCACCGAA GGCTAGTGAC AACTTGGTTC AGGCAAAGTG
GTAAATTGTG CGTTGGGGGA GCTAGTGAGG TTATCAACGT CTGGGACTGT CCGGCAGAAA
GATGCGTGCA AGTAAGTGAG GGGATTGGAA CAGATATGTA AAATACAAGT GTCAGTGGCT
CATCATCGAA CAGGTGCTGG AGACCAAAGC CAATGTGCCT GTCACAACTC TCATAACTGA
GCCTGTATCG GGAAATCTGG TAATCGGTGG ACAAGCAGAT GGAATGGTGC AATTATTTGA
TCTCCGACAA TGTCGACGGA CGTCCGTTCT CTCGTGGAAA GCTGACCTAC CCGGTTTATC
AATCCAACAA GAAGACATGA GACTCTTCAA CACGAAAAAG GACGGTGTAG CCAAAATGGG
CGTAATCTTG GGCGAAAGCA AGCATGTGAC TTCCGCATGG TGAGCATCAT GACGATATAT
GAAATGGTAA AGTATAGCAT AAGCTGATCA TCTTAATCGG ACCCTAAGCT TCAACGGGCT
GATAAATGTT CATGACATTC GTAACTTGTC CCAGTCAGCC GCCTCTGTGT TGGCGCATCC
TGATGGTATT GCCTCGGCAT CTTTTCAGCC TCACTCAGGT TTGATGTCGA CCGTATCATT
GTTAAACAAG CCTCCTTTAA ACTCATCTAA GGGGACGATC ATGAGTGTCA CACCTGCTTA
TTCACATTCT TCTACCCAAT CAAAGCTTTC CACGGCACTT TCCCATTTTC ATCTTCGTTC
TAGGTCCAAT TCATCTCCTA AAATTCGTCC TTCTTACACC ATGAACAATA ATATTACTTT
GCATCCGAGT GCTGCCTCTA TCAGGTCCTC AGCCAACTGG TCCCTTCATC GCACATCTCT
CGGCTCCTGC AATCCGGTGA CGGTCGAGTC TATATCTTTC GATTCTCAAC CTGCCGATGT
GATGGCTCAA GGATTTAGAC CTTACACCGT TATGCACCCC CTCAGGCCAT TCCTAGGGAT
TGGATTCGGG GAGACGTGTT ACCTCCGGGG CTGTGGAGTG GGAAAGGGCG ATGATACGGA
TAGCGGGAGC TACACCTTTC TGAGAGAGCA GGCCAAGTAC GGTGTTTTAT AG
 
Protein sequence
MQNSVPPATF RRINSLPLSH SHSPTPTDNA SSGWVTTTSS WTSSTKDPPS TLDVLSKGGG 
PLAWTEVRHR LQEGEHVDVD GEGNNVGHCS QAVILSCLHL AHEMALREVG MYAWTVPAVK
DPTGSMMKIM KRTLTAVCQV YFQKEEQEER KADEGLEEYE KQIKAMSRHA DLRCRSVPDP
SKLSIQHHLQ KARQAAGLNS YVAVIYSGHG IQEPPTEAGE LWCYDKNFEE CLQSGCGPSE
YIPILLFDLL TWAGASTCYV WDCKNAGRFI RAAKTEAEEI DSQLRTAAAQ NPSVAETQPA
TLFRAFRLQF PTMPCGQHGI LSLTICSNNC QNTSMTLTPM SHGEKDLKLV SFMADQLESI
TTAGQSLLFT ETPKSGMMPG LTRLPIICRA SMTEEFRVQA CSALDACLNA LDARGLARAV
QGGALDVAVE LLALQDERIK DQVISIWSSL VKYDSCVLAL AKEGLTADRL TDVPAVKFFL
IVLQENLAHD KLSPDAGDSG PDTQEDCSDF NLVPTVQIAA VLSTIANFVV GRSAPRFVSR
SLNMANIMLH SSCDLIRQWG ALLAAEVLGS LSISDEERLS EELKGELLRM VDSGNVENRA
AGIYALSRWL PVGDEWGASE LEGFTAMALW TQLLGYALDA RRQDISVAEK AIINLGMNLK
MAPKQKLLLN RIAAILSAVC VQRYDPDPMV AKIVHQPLCK ALDMLRSQSQ ESKKDANVWS
EIQSATFLSS KNKPEWTNEM FETILAASER VKELYQGTSS GNDPCRFTAE RPQHAKEAKS
RKRVNHGLFE RNKRALQAHI TFSNQINVFW RYLDYETSRS RGFARNSRTT GTVMSCNRDH
DLLMWDWNSS RKIGHVKLNL ASHTSITSAR FVNELHEQIV ILAEICNGDI HILAGPQDAS
RIKPIASFQA LNMHSSRNML VEDEDHRRLV TTWFRQSGKL CVGGASEVIN VWDCPAERCV
QVLETKANVP VTTLITEPVS GNLVIGGQAD GMVQLFDLRQ CRRTSVLSWK ADLPGLSIQQ
EDMRLFNTKK DGVAKMGVIL GESKHVTSAC FNGLINVHDI RNLSQSAASV LAHPDGIASA
SFQPHSGLMS TVSLLNKPPL NSSKGTIMSV TPAYSHSSTQ SKLSTALSHF HLRSRSNSSP
KIRPSYTMNN NITLHPSAAS IRSSANWSLH RTSLGSCNPV TVESISFDSQ PADVMAQGFR
PYTVMHPLRP FLGIGFGETC YLRGCGVGKG DDTDSGSYTF LREQAKYGVL