Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA03060 |
Symbol | |
ID | 3253411 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 797390 |
End bp | 802241 |
Gene Length | 4852 bp |
Protein Length | 1250 aa |
Translation table | |
GC content | 47% |
IMG OID | 638252637 |
Product | hypothetical protein |
Protein accession | XP_566730 |
Protein GI | 58258635 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACT CTGTACCACC GGCAACCTTT CGCCGGATCA ACTCCCTCCC ACTTTCTCAC TCCCACTCGC CGACACCTAC TGACAACGCG TCCAGTGGTT GGGTGACCAC CACGTCTTCT TGGACAAGCT CTACAAAAGA TCCGCCAAGC ACACTTGATG TGTTAAGCAA GGGAGGAGGC CCGTTGGCTT GGACAGAAGT AAGGCATAGA TTACAGGAAG GAGAACATGT AGATGTCGAT GGCGAGGGGA ATAACGGTAA ATTCACATAC AAAGGCTTAA ATGAAACTTG CAACTGATCA GAAATGCAGT GGGTCACTGT AGTCAAGCTG TCATACTATC ATGTCTTCAT CTCGCGCATG AAATGGCTTT GCGAGAAGTA GGCATGTATG CATGGACTGT CCCAGCTGTA AAAGATCCAA CGGGCAGCAT GATGAAGATT ATGAAACGTA CGTTAACAGC TGTCTGTCAA GTATACTTTC AAAAAGAAGA ACAAGAAGAA AGGAAAGCTG ATGAAGGACT TGAAGAGTAC GAAAAGCAGA TAAAGGCTAT GAGCAGGCAT GCAGATCTAA GGTGCCGTTC CGTACGTGGT TATCCCACAT ATCTGGAAAC AAGATTTATG CTAAAATACT CACTTAGGTG CCAGATCCTT CCAAACTCTC CATCCAACAC CATCTTCAGA AAGCCCGACA GGCCGCAGGT CTCAACAGCT ATGTCGCGGT CATCTATAGC GGCCATGGAA TCCAAGAGCC CCCAACAGAA GCTGGGGAGC TGTGGTGCTA TGATAAAAAT TTTGAAGAGT GTTTGCAGTC TGGGTGTGGC CCTTCTGAGT AAGTACAAGG TCGTTCGATG ACTATGGAAA AAGGTAACTC GATCAACTTT CATAGGTATA TCCCCATTCT TTTGTTCGAC CTCCTCACCT GGGCTGGTGC TTCGACATGT TACGTCTGGG ACTGCAAAAA CGCAGGTCGA TTTATTCGCG CCGCCAAAAC AGAGGCAGAG GAGATTGACT CTCAGCTCCG AACGGCAGCC GCTCAAAATC CGTCAGTAGC AGAGACGCAG CCGGCAACGT ATGCTAAACG GCAGATACAC TTCGCTGCCT GTAGCACAGA GCAAGTTCTG CCCAAAGTCA AAGGTTTACC TGATGACTTA TTCACTGCCT GCCTGACAAC ACCATTGAGG ATCGCTTTGT TGTTCCACAA TTTACAGTGC TTTCCTCTTA CTAGAAAGAA TGCCGAGAAA GCCACCATAA AAAGTCCCGC TTATATGGAC GGGCTTTGGG AGAACATGAG CCAAAGTCTG AAAGATCGAT TGTGGTCGGA ATTGACGGCA ATTCTGCATA CCATTGCCTG GCAAACACTC GATGGGTCAG AGTATCAGAA ATTATTTGGA AAATCGGGTG ATGTGGTCAA CAATATAGCA AGCGGATTCT TACTCTCGCA AAGGGTTCTC GGAGCATTCA AAGTGACCCC TGAGTCTGTT CCGAGCATTC CGTCTTCAGT TTCCAACCAT GCCTTGTGGA CAACATGGGA TCTTATCCTT GACAATTTGT TCGAACAATT GCCAAAATAC TTCGATGACG CTCACCCCAA TGTCACATGG GGAAAAAGAT CTCAAACTTG TCTCTTTCAT GGCTGACCAG CTCGAGAGTA TCACCACGGC TGGACAAAGC TTGCTTTTCA CTGAGACACC GAAATCTGGG ATGATGCCCG GCCTGACTAG ACTGCCTATC ATCTGTAGAG CATCAATGAC AGAAGAGTTC AGAGTTCAGG CTTGTTCTGC TCTGGATGCT TGTCTCAACG CGCTTGACGC GCGGGGCCTG GCCCGTGCCG TACAGGGTGG TGCTCTAGAT GTGGCAGTTG AACTTCTCGC ATTGCAAGAT GAAAGGATCA AGGATCAGGT TATCAGTATA TGGTCATCTC TTGTAAAGTA TGACTCGTGC GTTTTGGCGC TTGCCAAAGA GGGCCTCACA GCTGATAGGT TGACGGACGT TCCAGCCGTT AAATTCTTTC TTATCGTGTT GCAGGAGAAC CTCGCCCATG ACAAGTTGTC TCCTGATGCA GGAGACTCTG GTCCGGATAC CCAAGAAGAT TGTTCAGATT TCAACCTCGT TCCCACCGTA CAGATTGCCG CTGTCTTATC GACCATCGCC AACTTCGTTG TTGGTCGCTC TGCACCGCGT TTCGTGTCTC GCTCCCTGAA CATGGCAAAT ATCATGCTTC ACTCCTCCTG TGATCTCATT CGTCAGTGGG GGGCTCTGCT CGCCGCTGAA GTGCTGGGAA GTCTTAGTAT ATCAGATGAA GAGCGCTTAT CCGAAGAGCT AAAAGGAGAG CTCTTGCGTA TGGTGGATAG CGGGAATGTA GAAAATCGGG CGGCAGGAAT ATATGCTTTG TCAAGATGGC TGCCTGTCGG AGATGAATGG GGAGCATCAG AGCTAGAAGG TATATTGGAA CTCTCAGACC ATTTGGTCAA GCACAGCAAA GTGGAAGGAT CCCCTTTAGT AAGACGGGAG CTGGCTGAAG TCTTTATCCA AATACTTAAA TCTGCCAAAG GCTTCACTGC AATGGCCCTC TGGACTCAGT TGCTTGGATA TGCTCTCGAC GCTCGACGTC AAGACATATC AGTAGCTGAA AAAGCTATCA TAAACCTTGG GATGAACCTG AAGATGGCAC CGAAACAAAA GCTTTTGCTG AATAGGATAG CAGCTATCCT GAGCGCCGTG TGTGTGCAAC GGTACGATCC CGATCCTATG GTAGCCAAAA TAGTTCATCA ACCTCTGTGC AAAGCTCTCG ATATGCTGAG GTCTCAATCC CAGGAAAGTA AGAAGGATGC CAACGTCTGG AGTGAAATTC AATCTGCGAC ATTCCTCTCA TCGAAGAACA AGCCAGAATG GACCAATGAG ATGTTTGAAA CAATTCTAGC TGCCAGTGAA AGGGTCAAGG AGCTCTATCA AGGTACATCT TCTGGGAATG ACCCTTGTAG ATTTACAGCC GAAAGGCCTC AGCACGCCAA GGAGGCCAAA AGCAGGAAAA GAGTGAATCA TGGCTTGTTC GAGAGGAATA AAAGGGCGTT ACAAGCTCAT ATTACGGTGA GCCTAAGTCT AACATGAACC TTTTCAATGG CTGAAGCAGT GTTCAAATAG CAAGCTAGGC GAAAGGCAGA AATCACATCC CATGATAGTT CTCCAATCAA ATCAACGTCT TCTGGCGATA CCTGGACTAT GAGACATCGC GTTCTAGAGG ATTCGCTCGT AATAGCCGAA CAACAGGGTA TGTAATAATA ATTATAACGC TACATGTCAT TTATACTTAC GCCGGTGGCG TACCAGTGGG CTTGCCATGG AAATGGTCTA TGAAGGATAT AATATGCCCT GACCCATGGA CAACATTGAC CTTCCACTCG TTTCACAGCA CAGTTATGTC TTGCAATAGA GATCATGATC TCTTGATGTG GGACTGGAAC TCATCAAGAA AAATAGGTCA TGTCAAGCTC AACTTGGCAT CACACACCAG TATAACTTCT GCAAGGTTTG TGAACGAGTT GCACGAGCAA ATCGTCATTC TAGCTGAAAT CTGTACGCAT TTTTACATAT CTTCGTAATG TCAAGCGTGC TGACCCTTCA CTAGGTAATG GCGATATTCA CATCCTCGCA GGTCCTCAAG ATGCTAGCCG CATCAAGCCC ATTGCCAGCT TTCAAGCGCT AAATATGCAC TCGTCGCGGA ACATGCTGGT AGAAGATGAA GATCACCGAA GGCTAGTGAC AACTTGGTTC AGGCAAAGTG GTAAATTGTG CGTTGGGGGA GCTAGTGAGG TTATCAACGT CTGGGACTGT CCGGCAGAAA GATGCGTGCA AGTAAGTGAG GGGATTGGAA CAGATATGTA AAATACAAGT GTCAGTGGCT CATCATCGAA CAGGTGCTGG AGACCAAAGC CAATGTGCCT GTCACAACTC TCATAACTGA GCCTGTATCG GGAAATCTGG TAATCGGTGG ACAAGCAGAT GGAATGGTGC AATTATTTGA TCTCCGACAA TGTCGACGGA CGTCCGTTCT CTCGTGGAAA GCTGACCTAC CCGGTTTATC AATCCAACAA GAAGACATGA GACTCTTCAA CACGAAAAAG GACGGTGTAG CCAAAATGGG CGTAATCTTG GGCGAAAGCA AGCATGTGAC TTCCGCATGG TGAGCATCAT GACGATATAT GAAATGGTAA AGTATAGCAT AAGCTGATCA TCTTAATCGG ACCCTAAGCT TCAACGGGCT GATAAATGTT CATGACATTC GTAACTTGTC CCAGTCAGCC GCCTCTGTGT TGGCGCATCC TGATGGTATT GCCTCGGCAT CTTTTCAGCC TCACTCAGGT TTGATGTCGA CCGTATCATT GTTAAACAAG CCTCCTTTAA ACTCATCTAA GGGGACGATC ATGAGTGTCA CACCTGCTTA TTCACATTCT TCTACCCAAT CAAAGCTTTC CACGGCACTT TCCCATTTTC ATCTTCGTTC TAGGTCCAAT TCATCTCCTA AAATTCGTCC TTCTTACACC ATGAACAATA ATATTACTTT GCATCCGAGT GCTGCCTCTA TCAGGTCCTC AGCCAACTGG TCCCTTCATC GCACATCTCT CGGCTCCTGC AATCCGGTGA CGGTCGAGTC TATATCTTTC GATTCTCAAC CTGCCGATGT GATGGCTCAA GGATTTAGAC CTTACACCGT TATGCACCCC CTCAGGCCAT TCCTAGGGAT TGGATTCGGG GAGACGTGTT ACCTCCGGGG CTGTGGAGTG GGAAAGGGCG ATGATACGGA TAGCGGGAGC TACACCTTTC TGAGAGAGCA GGCCAAGTAC GGTGTTTTAT AG
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Protein sequence | MQNSVPPATF RRINSLPLSH SHSPTPTDNA SSGWVTTTSS WTSSTKDPPS TLDVLSKGGG PLAWTEVRHR LQEGEHVDVD GEGNNVGHCS QAVILSCLHL AHEMALREVG MYAWTVPAVK DPTGSMMKIM KRTLTAVCQV YFQKEEQEER KADEGLEEYE KQIKAMSRHA DLRCRSVPDP SKLSIQHHLQ KARQAAGLNS YVAVIYSGHG IQEPPTEAGE LWCYDKNFEE CLQSGCGPSE YIPILLFDLL TWAGASTCYV WDCKNAGRFI RAAKTEAEEI DSQLRTAAAQ NPSVAETQPA TLFRAFRLQF PTMPCGQHGI LSLTICSNNC QNTSMTLTPM SHGEKDLKLV SFMADQLESI TTAGQSLLFT ETPKSGMMPG LTRLPIICRA SMTEEFRVQA CSALDACLNA LDARGLARAV QGGALDVAVE LLALQDERIK DQVISIWSSL VKYDSCVLAL AKEGLTADRL TDVPAVKFFL IVLQENLAHD KLSPDAGDSG PDTQEDCSDF NLVPTVQIAA VLSTIANFVV GRSAPRFVSR SLNMANIMLH SSCDLIRQWG ALLAAEVLGS LSISDEERLS EELKGELLRM VDSGNVENRA AGIYALSRWL PVGDEWGASE LEGFTAMALW TQLLGYALDA RRQDISVAEK AIINLGMNLK MAPKQKLLLN RIAAILSAVC VQRYDPDPMV AKIVHQPLCK ALDMLRSQSQ ESKKDANVWS EIQSATFLSS KNKPEWTNEM FETILAASER VKELYQGTSS GNDPCRFTAE RPQHAKEAKS RKRVNHGLFE RNKRALQAHI TFSNQINVFW RYLDYETSRS RGFARNSRTT GTVMSCNRDH DLLMWDWNSS RKIGHVKLNL ASHTSITSAR FVNELHEQIV ILAEICNGDI HILAGPQDAS RIKPIASFQA LNMHSSRNML VEDEDHRRLV TTWFRQSGKL CVGGASEVIN VWDCPAERCV QVLETKANVP VTTLITEPVS GNLVIGGQAD GMVQLFDLRQ CRRTSVLSWK ADLPGLSIQQ EDMRLFNTKK DGVAKMGVIL GESKHVTSAC FNGLINVHDI RNLSQSAASV LAHPDGIASA SFQPHSGLMS TVSLLNKPPL NSSKGTIMSV TPAYSHSSTQ SKLSTALSHF HLRSRSNSSP KIRPSYTMNN NITLHPSAAS IRSSANWSLH RTSLGSCNPV TVESISFDSQ PADVMAQGFR PYTVMHPLRP FLGIGFGETC YLRGCGVGKG DDTDSGSYTF LREQAKYGVL
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