| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA03050 |
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| Symbol | |
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| ID | 3253413 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 794578 |
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| End bp | 797259 |
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| Gene Length | 2682 bp |
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| Protein Length | 773 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638252636 |
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| Product | ubiquitin-protein ligase, putative |
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| Protein accession | XP_566728 |
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| Protein GI | 58258631 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCC ACCTCGCAGC CCGTCTTCAG CACCTCGCAT CCTCCTACCC GCCGCACACA
GCCCTCTTCT ACGCCCGCAT ATGGCACACA CTCGCGCCCA CCACAGACAG CAACCACGAC
TCCCTGCATG CGCTCGCGCT CGCTTTCCTC CAAGCAGCAG AGCCATACTC CGCCATACAC
CTCGTCAGAG ACCACACAGG CCTCGACAAC CTCGATCTGG ATCTGGAAAT CAGGTTTGAG
AGGACAGACA AGGTGTGTGG CGGCTGTGCC ATGATCGTTG CTCGCTGCTG TGAGAAACTA
GGCAGGTACT CGGAGGGACA GGCCGTCTTG GCCAGGGCGT TGAAAAGAGG TGCCAATATC
AGTAGGTTTG GTTGCAACGT TGATGAGTAC CCCGTCCTGA CGCTTGACAG ATTTAGCATT
GCCTGCACCC TCATCGAATG CTGCAACGGC ATATCTACTC CTGGCCAACC TGTCACACAA
AGGTAAATCT CCAGAAACAG CCATCGAAAA TTATAGGAAA GCGCTTGATG AGGATCCTTG
GATGTGGGAA GCCTTTACTA ATCTCTGTGA CGTCGGTAGG TTGAAGTCTT TTGATGTTTC
TCTCTTTCAG CCAATTCGGG AACTAACGAA GCACTCGCAA GGTGCCCCAC CCCCTATCGA
GTCCCTCTTC CCCGCAGGAG CGGGCCTTTC TCTCTCTAGG CACGCCTCAC GATCGTCAAG
GCCCCCATTG TCGCCAAACA TTCATCGCCA GAAATCCCCT ATAGAACCGG CACCTGGCGT
TCTGAGGCTT CACCAAGCCC AAGCAGGTGC TGGCAATAGT GGTGGATTGT TTACCCCCGA
CGTCGAAGGA ATTGGAGGGA AAACGGGTCT TGGTATGATG GGCAATCCTT CTTCTTGGGA
GTAAGTCCAT TCACCATCAG TCGTACAGCA AAGCACTGAC TTGAACTGGC CAAGCTCGTC
ATCCATAATA GGCGACACCA CTTTTGCGGT CCCGGAACAA CCGACCAAGA GACCATTCCC
GTCGTTCATG TCAACTGCGA CCAGCTTCCT TCCATCGTCT CTTCGAGGTG GTACATCGAC
CCCAGCAGGA AGTGACTCTC CACCTAAATT GCCTACTATG AAACGACCCA GAGGCAAAGA
TCCTGTCAAA AGGCCAGTGG AAACACCCCA GTCACAGATG AGCAGCGGAC TACCTCTTGC
CAAAGAATTG AGGCCAAACG GCGCAAAGTA CGAAGACTCG GATGCTCCCC GTCGTAGCTC
GCGGCTCAAA ACGACAACTT CTAAACCTGC ACCCAAAATT CCCCGCGATC CGCACGCCAC
GCGCTCTCGA TCAGTCACTT CCTCCAACTC CAATAACGAG GTCCCTTCTC CTCCCTCGTT
GACATCGCAA GATGCGATTC TACAAAGGGA AGCGGATGAG TATCTCAAGG ATATAGTAAA
AAAATGCGCA AGGGTTTACA AAAGTTTAAG CCGGTATCAG TGCCAACAGG CCATCAAGGA
GGTGGATGCC TTGCCCGGAG AGTTGAAGAC ATCACCATGG GCAATGGAAA TTCTAGGGAG
GGCGTTTTAC GAGATTGCCA ACTATGCCAT GGTAAAACAT CTGCCCTATC TTTTTAAAAG
CTATTGCTAA TCCAAACCAT ACACCCGCAG GCACGGCGAG CATTCACGTT TCTTCAACAG
CAAGAACCGT ACCGCATCCA ATCCATGGAG CAGTTATCCA CCCTTCTCTG GCATCTCACC
GACCTCCCTG CACTTTCACA CCTTTCTCAA AGCTTGATCT CAATCAGTCG TTCCTCTCCT
CAGGCTTGGA TCGCCGTGGG GAATTGCTTC AGCTTGCAAA AAGACCATGA TGAGGCTATG
AGATGTTTTA GGAGAGCGAC ACAAGTGGAT GAAGGTTGCG CTTATGCGTG GACACTGTGT
GGGTATGAAG CGGTAGAGAT GGAAGAGTAT GAGAGGGCTA TGGCGTTCTA TCGAACGGCC
ATCAGAACAG ACGCAAGACA TTATAATGCT TGGTATGTTT TTTTTTTCCG TACCAGGCGA
CATCGACGGC TGATCAAGAA AAGGTATGGG ATGGGACTAG TATATCTCAA AACGGATAGA
CCGCGATATG CGGAGCATCA CTTTAGAAGA GCCGTCGAAA TCAACCCGAC CAATCCCGTC
CTTTTATGTT GTGTTGGCAT GGTAAGTTAC GAGTCATTTT ACCCTCTTGA AGCAAATGAC
GACTAACATC GATTTAAAAA AGGCGCTGGA AAAGTCAGAC GATGTCGTGC AAGCTCTTCA
CTTTTATGAG CGTGCCTCCA AATACGCGCC CACCTCCGCG ATGGTGCAGT TCAAACGCAT
TCGTGCCCTT GTCGCTCTTC AACGGTACGA CGAGGCCATT TCAGCGCTTG TACCCCTCAC
ACACAGTGCA CCGGACGAAG CAAATGTCTT TTTCTTGCTG GGAAAATGTT TACTCAAGAA
GGAGAGAAGA CAAGAAGCTA CAGTGGCATT TACAAATGCT CGGGAACTGG AACCCAAATT
GGAAGGCGTC ATCAATGCTG TTTTGGCCGC AAACGGAGAA GAGGGAGAGG ATGAGGAATG
AACGGCAGCG TACGCATAGT GTTTTTTTTA TTAAGTTTTA CGAACCTTTA CGTCAGATTC
AAGTATTTTG ATTACGTCCT TTGTTCTTAG GCTCACAAAG GA
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| Protein sequence | MNTHLAARLQ HLASSYPPHT ALFYARIWHT LAPTTDSNHD SLHALALAFL QAAEPYSAIH
LVRDHTGLDN LDLDLEIRFE RTDKVCGGCA MIVARCCEKL GRYSEGQAVL ARALKRGANI
SRFGCNVDEY PVLTLDRFSI ACTLIECCNG ISTPGQPVTQ RKALDEDPWM WEAFTNLCDV
GRLKSFDVSL FQPIRELTKH SQGAPPPIES LFPAGAGLSL SRHASRSSRP PLSPNIHRQK
SPIEPAPGVL RLHQAQAGAG NSGGLFTPDV EGIGGKTGLG MMGNPSSWDS SSIIGDTTFA
VPEQPTKRPF PSFMSTATSF LPSSLRGGTS TPAGSDSPPK LPTMKRPRGK DPVKRPVETP
QSQMSSGLPL AKELRPNGAK YEDSDAPRRS SRLKTTTSKP APKIPRDPHA TRSRSVTSSN
SNNEVPSPPS LTSQDAILQR EADEYLKDIV KKCARVYKSL SRYQCQQAIK EVDALPGELK
TSPWAMEILG RAFYEIANYA MARRAFTFLQ QQEPYRIQSM EQLSTLLWHL TDLPALSHLS
QSLISISRSS PQAWIAVGNC FSLQKDHDEA MRCFRRATQV DEGCAYAWTL CGYEAVEMEE
YERAMAFYRT AIRTDARHYN AWYGMGLVYL KTDRPRYAEH HFRRAVEINP TNPVLLCCVG
MALEKSDDVV QALHFYERAS KYAPTSAMVQ FKRIRALVAL QRYDEAISAL VPLTHSAPDE
ANVFFLLGKC LLKKERRQEA TVAFTNAREL EPKLEGVINA VLAANGEEGE DEE
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