Gene CNA02880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA02880 
Symbol 
ID3253828 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp753126 
End bp755873 
Gene Length2748 bp 
Protein Length508 aa 
Translation table 
GC content45% 
IMG OID638252619 
ProductHigh-affinity nicotinic acid transporter, putative 
Protein accessionXP_566699 
Protein GI58258573 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATAACCGCAT TTACGACGTC TCATTATCAT CCACAATACC AGCCGTTGTT ATCAGGGTGG 
GGGAAAGAAA GTGGGGGAGT GTTTCCGGTC ATAAGAATCG AACTGTTCAT GCAGTTTACT
TATTACCGAT GATGAGCCTA AGTCATCGGG GGGGTATAAA GTCAAACCAA CAGCAGTGAA
CTGATCATTA CTATCCCATC CACCAACTAT ATTCTATGGG CAATATGAGC ACCTTTGCCA
CTGCCGCTAC AAATAAGGCA GAAGATTGCT CTAGCGAAGT AGGTATATCC GAAAAGGGTG
TGGAAGCACA GGACCTCAAG GATGTTGCGG ATATCGAAGT GCAAGTTGCT GGTATCGACC
GAGCAATTGA GCGCAGGTGA GTAGTGCCAA TGTCGCGCGT AGATGGTGGC ACCTGAACAG
GCGCTGACAT GGGGTATTGT TACCACCTCT CAAAGGATGT TGAGGAAGCA AGATTTTGGA
CTGCTCCCTG TACTCGCAAC AGTCTACCTG TTCAATGCGT TAGACAAGTC GGTTCTTTCT
CATGCCCCAT GGGGACTTTC CCCCAGATCT CAACCAACTT GCTAACATTC TTGAAGGGGA
AATCTCTCCA ATGCTAAAAC AGGTGAGCCA TTGCCTTCGT AGTCTCCTAT GAATCATTTT
GACATCGATT ACTAATCCCT CCTTTTTAGA CGGACTTGAC AAAGGTCAGC CTTAATTGCC
CCGACTGGAT AAGCTAAATT CAGTGGCTAA TACCTCCTTT AGACCTGGGC CTAGTAGGAA
ATCAATACTG TCAGTGTTTA TACCTCAATC GTTACCTGCC ATTTAGTGAG CTGACTTCCG
CTGTGACATG TGCATGCACA GATCTCATGA TCACTGTCTT CTATATCCCC CTTTGTCTTT
GCGGGACACC ACTCTCAATC GGTAAGTCCG ATCTTTATGA TTTCAATGGA GCTCTGATAC
AATTATATGC AGCTGCCAAA CGTTTCTCAG CCGCTCGGGT TATCCCCCTC ATGATGATCG
GCTTTGGTTC TTGCTCGCTC CTAAGCGCAT GTGTGACTAA TTTTGGTGGT CTTTTTGCCC
TCAGATTCCT TCTTGGTATT TTTGAATCAC CCATGTTCGT ATTCTAAGTG TTAAATGCCT
CTGTCACACT GATAAATGCC GCTGTAGGTT ACCTTCGGTC GTTTTCTACC TCAGTCAGTT
TTATACCCGA GGGGAGCTGG CGAGGCGTGT GGGTGTTTTC TATGCGGCTT CTTCCATCTC
AGGTGTCAGT CATCCCTCTA AGATTTTTTT ATTCGGTCTC CTAATGCCAA GAACATTCAG
GCATTTTCTG GCTTACTGGC ATTTGGCATC TTCCAGATCA AATCGGGAAG GCTGCATGGT
TGGCAATATC TCTTTGTAAG TGTGGCTCTT CATAGGCGCT AAGTCTTTAC TGTCTCACCA
GTTGATTTTT TGTGTTAGCT CATTGAGGGA GCTGGCACAG TTGCTTTCGC GATCTTTGCT
TTTTTCGTAA GTTTTCTCGG TGTTCCTGCT GATGATATCG AACCTCTAGC TAAATTGATT
TTTTAGTGGC TTCCTCGAAG TCCGGCAACT TGCTGGTTTT TCAATGAAGA GGAAAAGCAG
TTAAGTCGCA TGCGAATGCT GCGAGACGGC ACCAGCGAGA TTGGAGAGAA GGTGGGTGTC
ATTTTTTCAT TGTCATTTAG GCTGCATCTG ACGCCAAGGT TAGGTCGACT TTAGAGTGAG
ATATGCATTA ATAGTATCAA GCGGAAATCG TTTTAACCCA ATCGGCTGTA GGACGCTTTC
ATGCCATTTA TCAAAGACTG GAGATACATT GTTTGGGCTT TTCTTGCCCT GGGGCTGGGA
GTGCCCCTAG CTTCAGTAGG AAATTTCCTT CCTCAAATTG TTGGCCGATT AGGCTACAGT
ACTGTCAAGA CCAACCTATA TACGGTTGCT CCGGTGCGTG ATACCCATTC CTAATGATGT
TGTTGCTGAA GTGATTTGAT CCGTTCTCCA GAACATCGTT GGTACATGCT TCCTTGTACT
GTTCACTCAG TCAAGTGATT ACTTCCGAGA AAGAGCAATT CATATAGTAA TACCGCTAAT
TATCACCATG ATCGGTAAGC GCATTTTTTT GCTGCACTCT GAGCACCCAA TAACCGTGCG
TTACATAGGT TTCATTATCT TGGGCACCAT AGACGTCCTC AACTATAAAG GCGTTGCATA
TTTGTAAGTT TTTCGTCATT TCGAAAGTAT CATATCTGTT TAACAACGAT TTACGTAGCG
CATGTTTTCT TCTTTGCATT GGGTCCAACA CACCTTCCGT CTTACTATCC ACCTGGTACT
CTAACAACTC AATCTCTGAA AATAAGCGAG TGGTTCTGAC AGGCGTCATG GTTGGCATCG
CCAATGCAAG TGGACTAATT TCTGCCAATA TCTTTCGTGT GGGTCTTACT TGCCTAGGAT
ATTTTGAAAC ATGACTAATC ATAATGAAAG GCGCAAGACG AGCCAAAATA TATTCCAGCT
CTTGCCGCTT CGGCCGCTTT TGGAGGGTTC ACTGCCCTCC TGGCGTGCTC TTTTGGCCTG
TACATGCGCA TCGAGAATCG CAGAAGAAAC TTTGCTCAAG GGTTACCCAA GTCTTACGGG
AGCAAGGATG TGCCAACAGA ATATCTCGGA CGCGGCCCTA AAGACCAGGC ATTCAGGTAT
ATGTTTTGAT AGTTGAGCTG AGAGATCATT CACGGAAGAT TATTATCT
 
Protein sequence
MGNMSTFATA ATNKAEDCSS EVGISEKGVE AQDLKDVADI EVQVAGIDRA IERRMLRKQD 
FGLLPVLATV YLFNALDKGN LSNAKTDGLD KDLGLVGNQY YLMITVFYIP LCLCGTPLSI
AAKRFSAARV IPLMMIGFGS CSLLSACVTN FGGLFALRFL LGIFESPMLP SVVFYLSQFY
TRGELARRVG VFYAASSISG AFSGLLAFGI FQIKSGRLHG WQYLFLIEGA GTVAFAIFAF
FWLPRSPATC WFFNEEEKQL SRMRMLRDGT SEIGEKDAFM PFIKDWRYIV WAFLALGLGV
PLASVGNFLP QIVGRLGYST VKTNLYTVAP NIVGTCFLVL FTQSSDYFRE RAIHIVIPLI
ITMIGFIILG TIDVLNYKGV AYFACFLLCI GSNTPSVLLS TWYSNNSISE NKRVVLTGVM
VGIANASGLI SANIFRAQDE PKYIPALAAS AAFGGFTALL ACSFGLYMRI ENRRRNFAQG
LPKSYGSKDV PTEYLGRGPK DQAFRYMF