| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA02700 |
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| Symbol | |
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| ID | 3253997 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 702627 |
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| End bp | 705189 |
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| Gene Length | 2563 bp |
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| Protein Length | 560 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638252601 |
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| Product | t-complex protein 1, eta subunit (tcp-1-eta), putative |
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| Protein accession | XP_566667 |
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| Protein GI | 58258509 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02345] T-complex protein 1, eta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0993409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACAAAACAA TATTCTTCTA CACAATGCAG GGAAGACTTC CTCAAATGGT GAGTCCATTG
GAATGTTCCA TTTCCTTGTC ATGCTAATTT CTCGCAGCAA CCCACGGTCG TCCTCCTGCG
CGGTATGTCC AGCTTTTTCT GCATCACCGC GCGTCTTCGC CTGCTCTCCG ATTATGATCT
TGTGAACGGC AGCTGACAGT CTTCGCTCTT CTTCAATAGA GGGCACTGAT ACCTCCCAGG
GTACCCCACA ACTTCTCTCT AACATTTCTG CTTGCTTGGC TGTCGCCCAG ACTATTGCTA
CAACGCTAGG ACCGCGAGGA ATGGACAAGC TCATCGTAGA CGACAGAGGT CTGGCTACTA
TCTCTAGTAA GTGTGCTATA GCATTTCTAC TAGTCTCGTT TACTAAGGCT GACTGAACTT
TCCAGATGAC GGTGCAACTA TTTTGAAGCT TTTGGATGTT GTCCATCCCG CGGCGAGGAC
ATTGGTAGAC ATAGCAAGAG CTCAGGATGC CGAGGTGGGA GACGGTACCA CAAGTGTTAC
CCTACTGTGA GGCTTTCGCT ACGTACATTG CATAACTTTA CTGATTATGA GCCAGTGCTG
CGGAGATCTT GAAAGAAGTA CGACCTTTCA TCGAGGAAGG AGTCTCTCCT CATGTGATCA
TTAAAGGACT TCGAGAGGCT AAAACTTTGG TATGTCCGAG TCAGATGCAA TATTCTTTTT
GCGTACTGAC ATCTAACATA GGCTATACAA AAGATCAACG AGATTGCTGT GACAATAGAC
AAATCTGACC CGGCGTACGT CCCGATCGGC TCGTTCAACT TTTCCGACTA ACGAAACTTT
TAGTGAATTC CGCGACCTTC TCATGCAATG TGCGGCTACT TCTATGTCTT CCAAACTCAT
CCACTCCCAA ACTCCCTTTT TCTCCAACAT GGTTGTCGAC GCCGTTCTTT CTCTTGATCA
AAATGATCTC GACGAGTCTC TTATCGGTAT CAAAAAGGTT CCTGGTGGCG GTATGCAAGA
TTCCAAACTC ATCAAGGGTG TCGCTTTCAA AAAGACGTTT TCTTACGCTG GTTTCGAACA
ACAGCCCAAG AGTTTCAAGG ACCCCAAAGT TCTTTGTCTG AATGTAGAGC TTGAGCTCAA
AGCCGAGAAG GACAACGCTG AAGTACGAGT GAATGAAGTC TCTGAGTATC AGGCTATTGT
CGATGCCGAG TGGAGCATCA TTTTCCGCAA ACTCGAAGCT ATCGTCGCTA CGGGGGCCAA
GGTCGTACTC TCCAAGCTTC CTATCGGAGA CTTGGCCACT CAGTACTTTG CCGACCGTGA
CATTTTCTGT GCCGGTCGAG TTGCGGATGG TGATCTCAAG CGTGTCGTCC AGGCCGTCGG
TGGATCCATC CAGTCTACAT GCTCTGATAT TGAACCTCAT CACTTGGGTC AATGTGGCAG
TTTTGAGGAG AAACAGATTG GTGGTGAAAG GTTCAACTTG TTCGAAGGTT GCCCCCAGGC
CAAGACATGT ACTTTGATTT TAAGGGGCGG TGCGGAGCAA TTCATTGCTG AAGTGGAAAG
AAGTCTGCAT GACTCTATTA TGATTGTTAA GAGAGCAATC AAGAACAATT CCGTCGTGGC
CGGTGGTGGT GCTTGCGAGG TAAGCAATAT TTTCACACAT GTCAGTTTAA GCTCTAATTT
GGTGCGTTCA GATGGAGACA TCAAAATATC TTCGAGCTCA TTCTCGAACC ATCATGGGTA
AAGCCCAGCT AATCGTGGGT GCTGTCGCCA AGGCCCTGGA AATCATCCCT CGCCAAATCT
GCGACAATGC CGGTCTTGAT GCTACGGATA TCCTCAATAA GCTTCGTATG CGCCATGCTC
AAGGAGAAAC TTGGGCCGGT ATCGACGTCG ATGGTGAGGG TGTGCAGGAT AACATGAAGA
GTTTTGTATG GGAACCTGCT TTGGTCAAAA CAAATGCCTT GAGTAGTGCA ATCGATGCGG
CTTGCTTGAT ACTGAGTGTC GATGAGACGG TTAGAAACCC CCAGAGCGAA CAGCCTCAGG
CGGGGCCTCC TATGCCGAGA GGAGCTGCCC AGCAGGCAAT GAGGGGCAGG GGTAGGGGTA
TGCCTCGAAG ATAAATGTAG AGTCGCGACA GTAGAGACAA CTAGCAGTGT TGATGCATAC
AGGTCATACG ATAATCACAA CCGTTTTATC CTTGTAATAT TGGGTTTTAG CCTTGTGGCT
CGTGATGACT TCAGGTCCTT TGACATGTAC ATGCATTCCG TTTTTTAACG ATTAATAAAA
TATAGACAGC TGCGTTGGAC GTCGACATGC TAGGCGGTGA AGGAAAAGAA CTAACGAACG
CATGAATGAA TGAAAAGAAT CTTGAATATT TACCATGTAC ATAAACTGAT GGACGATCCT
TTATCATCTC GGATCTCAAA GTACCACCGA AGTCTCGATC GGTCTGACGC TGTCATTATC
ACCAGCCATC TTTTTGTCAG TTTTGTCGGT AGGGTTTGCA AATGGACTGC CAGTGGAATG
AGGGGTGACA GCTTCGTTCT CATCTTCCGT TGGTGACTCG GTA
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| Protein sequence | MQGRLPQMQP TVVLLREGTD TSQGTPQLLS NISACLAVAQ TIATTLGPRG MDKLIVDDRG
LATISNDGAT ILKLLDVVHP AARTLVDIAR AQDAEVGDGT TSVTLLAAEI LKEVRPFIEE
GVSPHVIIKG LREAKTLAIQ KINEIAVTID KSDPAEFRDL LMQCAATSMS SKLIHSQTPF
FSNMVVDAVL SLDQNDLDES LIGIKKVPGG GMQDSKLIKG VAFKKTFSYA GFEQQPKSFK
DPKVLCLNVE LELKAEKDNA EVRVNEVSEY QAIVDAEWSI IFRKLEAIVA TGAKVVLSKL
PIGDLATQYF ADRDIFCAGR VADGDLKRVV QAVGGSIQST CSDIEPHHLG QCGSFEEKQI
GGERFNLFEG CPQAKTCTLI LRGGAEQFIA EVERSLHDSI MIVKRAIKNN SVVAGGGACE
METSKYLRAH SRTIMGKAQL IVGAVAKALE IIPRQICDNA GLDATDILNK LRMRHAQGET
WAGIDVDGEG VQDNMKSFVW EPALVKTNAL SSAIDAACLI LSVDETVRNP QSEQPQAGPP
MPRGAAQQAM RGRGRGMPRR
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