Gene CNA02550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA02550 
Symbol 
ID3253563 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp667719 
End bp668902 
Gene Length1184 bp 
Protein Length265 aa 
Translation table 
GC content47% 
IMG OID638252587 
Productisopentenyl-diphosphate delta-isomerase, putative 
Protein accessionXP_566641 
Protein GI58258457 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID[TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAACTTTAA TTTCTCTTAT CATCTTCTTG CCAGTGCTCC TCCTGGCTTT CCAACATGTC 
GACAACTGCT GTAGAAACCG TCACCACCTC TCCCGCGACT CTCACCACTG CCGTCAATGA 
TATTAATCTC GATTCGTATG ATGAAGAGCA AGTAAGACTT ATGGAAGAGA GGTGCATTCT 
TGTCACTCCC GAGGACAAGG TTTATGGCGA AGGAAGTAAA AAAGTCTGTA AGTGAAAAAA 
AAGAAGATAG CTAGCTAGGG TAAGCTTTGC TTATTCTCTT CTCGGTAGGT CACCTCATGT 
CTAACATCAA CACTGGTCTT CTTCATCGTG CTTTTTCCGT TTTCCTTTTC CGCCCCGCCG 
ATGGCCGTCT CCTCCTTCAA AAACGTGCCG ACGAAAAGAT AACTTTCCCC AGCATGTGGA 
CCAATACTTG CTGTTCTCAT CCGTTGAGTA TCAAAGCTGA ACTTGTGGAA GAGCACCAGG 
CAGGTGCGTT GGCCATTTTG TCTATAGAGA TTGAACTGAC TTCGTTGCAG GCGTGAAAGC 
CGCCGCCATT AGAAAACTTC CTCAAGAGCT GGGAATACCA GAGAGTCAAC TTAAGCCTGA 
GGACTTCCAT TTCCTCACTC GGATACACTA TCTGGCGCCT AGTAGTGGCG TCTGGGGAGA 
GCACGAGAGT GAGTAAATCA TTGTACCAAG GCTGCGTCAA TTGCCTACTA ACCGAGACGC 
AAGTCGACTA CATTCTGTTC TCTACCCTCA ACGTGGACCT TGACCTCAAC CCCAACGAGG 
TCAGTGATGC CAAATATGTT TCAAAATCTG AACTTGAGGC CATGTTCACC GATCCTTGTG 
AGTGCCTTCA TTCCTCAGCA GCCCCAGTTG CTAACATTTA TCTGCTCATC TGCAGCCAAT 
TCATTCACCC CGTGGTTCAA GCTTATTGCT CGAGACCTTC TTTTCCCTTG GTGGGATGAG 
ATGCTTGCCA AGTCTAGATC GGCCGGGTGG GACGAGGAGA GCGGAGTTGG AGAGGTTCGA 
GCGGACGTAC TGGCTAACGG ACCGAAAATA AATGAGCTCA TTCGGATGAT CTGAGTTCTG 
TCATAGTTAA AGAGAGCAGC ATTGATCTTT GAGATAGTGG ACGGCGTTTT GGACATTCGT 
GTAATTTCAT ACTTTTTTTT GGACATAATG GAGGTATATT CTCT
 
Protein sequence
MSTTAVETVT TSPATLTTAV NDINLDSYDE EQVRLMEERC ILVTPEDKVY GEGSKKVCHL 
MSNINTGLLH RAFSVFLFRP ADGRLLLQKR ADEKITFPSM WTNTCCSHPL SIKAELVEEH 
QAGVKAAAIR KLPQELGIPE SQLKPEDFHF LTRIHYLAPS SGVWGEHEID YILFSTLNVD 
LDLNPNEVSD AKYVSKSELE AMFTDPSNSF TPWFKLIARD LLFPWWDEML AKSRSAGWDE 
ESGVGEVRAD VLANGPKINE LIRMI