Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA02490 |
Symbol | |
ID | 3253544 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 652165 |
End bp | 654177 |
Gene Length | 2013 bp |
Protein Length | 287 aa |
Translation table | |
GC content | 47% |
IMG OID | 638252581 |
Product | hypothetical protein |
Protein accession | XP_566635 |
Protein GI | 58258445 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.471511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TAAAAACGTG GCATCATACA TTCTTCGCTC GGTCTCGCGT CCAACAACGA ACACACCATC ACTGTTTTCA TATTCCTTCA ACTTCTTCTC GTCTATTGCT ACACATCGCC AGGACCTTCA TTATGGTAAG TACCCATACG GCATCACATC TTTCCCTTGT CCTGATCACA AGCTTATATT TCATTACTCA GTCTCAGCCA GAATCCTCTG TCGCTCCCCC TCGCGAATCA TACGATGAGC GAGCTGCTTC TCCACTTCCG CGAGACTATG CGGAGGACAA GTACTCTACT CGTCCTCCAC CTGCCAGATA TGATGACGAG CTGAGAGATG ACTCGTATTC TGCCAAGGGA GGCGATACTT ACAGAAGTGA TCGCCCTGCA TTGTGAGTCA GCTTCTCATC AAGGGTTGTC CGGAAATTTG TTGGTTGCAT CCGGTCGAAT ACCAACACCC TGTCTTTATT TGATTTATAT ATTCTTGCCT CTCCATTATA TGTGGCTAAG CATCCCTCTA GTGAAGCACC CCGTCGACCT GCTCAGGCTC CACCTCCAGT CAACCCGAAC CCAGTTCTCG GTGTCTTTGG TCTTTCTATT CGCACTCGTG AGCGAGACCT CGAGGATGAG TTTATGAGAT ATGGTGATGT GGAGAAGGTT GTTATTGTTT ATGACCAAAG GGTAGATATT CCTCATTCAA AGCTTTTACA ATCGCTAACT TTCAATCAAC TAGACCGATC GTTCTCGAGG ATTCGGCTTT ATAACAATGC GAACCGTTGA CGATGCGGCA CGGTGTATTG AAAAACTGAA TGGGCTTAGT CTTCACGGCC GAAACATTCG CGTCGACTAT TCTGCTACTC AGAAACCTCA CTCTTCCACA CCTGGCCAGT ATATGGGTGC CAAGAGACCA GTTCGTAAGT CTTCTCTCTC ACATATGAAT TGCAATGCAA TCTTGAGCTC ATATCGGGCA GGCGATGACC GCTACGGTCG TGGGCGCTAT GATGATCGCC GAGGAGGCTA CGGCGATCGA CGTCACGACG ATCGCCGTGA TTATTACGGT TCAAGTAGCA GCAGACACGA CGATCGAGAT GGCGGCTACA GGCAAGTCGG CTTTTGTAGC GCGACAGGCT CATCCACTGA TAAACTTCTT TTATTCTTAA AAACAGAGAG TCTTACGGTT CTCGTAGGAC TGGTGACCCT TATGAAGGTC GCAGCAGGAG AGATGATTAC AGCTACGATA AATACGACAA GCAAGACAAG TATGCCGACT ATGATTATGA TAGGCGAAGG TAAGCAGATG TCGGATAATG TTACACGCGC TGACTATTAC CCTCAGTTCC CGACGAAGCA GATACTCCGC TTCTCCTGCT CGTTCTACTG CTGCCCCCGC CCCCGAAGTA CCTAGGTATT AGTTTTCGTC TTTTTTCAGT AGCAAAAAAT TCCGCGCGCG TCAATCAAAC ACACTGTGCA TACCCAAAAA AAACCCAAAA CATAAAAATG CAATGTGCCA AAGCACGCAA CAAACTCTTT CGTATATTGT AATCAGCAAT GCAAGTTTGA ACAGACTCCA GTATTCTTCT TCAGAAGGAC AAGATGCTAC GATACCTGGC AAAACACAAT TTATCATTGC AAATATTGAC GACGGCTGCA ATCTTTCACC CGACGTGGTC TGCGGGGTAC AAGTGCATTG CTTGCACCGC TGCTTGACGC CGGCGATTTT GCCATAGTTG GCATGAGAGT GAGTACGCAT ACATCTTCAA CTCACCTACA GTTTTTGATA GTGTGGACCT TGCTACACTC TCTGAGTGAA AGTTTCATAC TGTACGCCTT TCAACAGCTT AAACTATCGC AGTGAGTATA CCGTTATTTG TGAATGACCA CATCTGCATA TATACTTTGT TTGCCGGAAG GGCATCCGCT TGCTTTGTTT TTTGGTTCGA CTGGCTCCTA AAGTGACTTC TTCGGCTCTC AATGTTTGGC TTTTTGGTTT TGCTTTGAAG CCGAACCTTC TGCCAAGTAT AGT
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Protein sequence | MSQPESSVAP PRESYDERAA SPLPRDYAED KYSTRPPPAR YDDELRDDSY SAKGGDTYRS DRPAFEAPRR PAQAPPPVNP NPVLGVFGLS IRTRERDLED EFMRYGDVEK VVIVYDQRTD RSRGFGFITM RTVDDAARCI EKLNGLSLHG RNIRVDYSAT QKPHSSTPGQ YMGAKRPVRD DRYGRGRYDD RRGGYGDRRH DDRRDYYGSS SSRHDDRDGG YRESYGSRRT GDPYEGRSRR DDYSYDKYDK QDKYADYDYD RRSSRRSRYS ASPARSTAAP APEVPRY
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