Gene CNA02430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA02430 
Symbol 
ID3253638 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp636106 
End bp637625 
Gene Length1520 bp 
Protein Length375 aa 
Translation table 
GC content52% 
IMG OID638252575 
Productconserved hypothetical protein 
Protein accessionXP_567150 
Protein GI58259475 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000237678 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAA GAAGACTCGC ATCCACTGTC TCTGTCCCTC CCGAGACCAA GTCTCCTCGC 
AAGATTGTCC TAGTAGGAGC CGGTTTTCTC GGTAAATCCT CTCTGTAAAG AGATCAAAAA
AAAGGCTAAC AGTTTCTTGA ACAACTATAT ATATATATAG GATCGTACGT CGTCAAAGCC
TTGATTGCAG ATCCCCGTAA CCGAATCCAG ATTGTATCTC GTCACCCTCA ATCTCGTACG
TCCCCTCCTC CACCCTTGAC GGCCCAACTT GTATCTTTAC GATCCTGATC AATTTGTCAC
TTGGCTTTTG CAACAACTAG TCCATTCCAA ACTGTCTACT TTGGGAGCCC AGATCCTCCC
CCCCGCCTCG GTGGACATCA CCTCGCCTTC CTCCACCTCG GAACTGCGCA AAGCCTTCAA
GGGGGCTTCC GCCGTCGTTT CCTTGGCGGG CTTGTTGGTG GGGAGCGACA AGCAGATGAA
GGCGCTGCAG GAAGATGGGG CGAGGAGGGT TGGGGAAGCT GCTAGTGAGG AAGGTGTAGG
CAGGGTGGTT GGCGTGAGTG CCATTGGGGC TGACCTGCGA GGTGTAACTG CCTAGTGAGT
TGGGTGGGGG GGGGGGGGGG GGGGTTGTGC TGATGAACGA TTAAACGGAC ATAGTTGGAG
GACCAAGGCG AAAGGGGAAG ATGCTATACG TGAATACCAT CCGACTGCAA CGATCATTCG
TCCTTCACTC CTCTTCGGTC CCGGCGACTC TTTCTTCTCG GTGAGTACTT TTTTTTTTTT
TTATGGCGGT GGTGACAGTG AAACGATCCT GACTTATGTT TTCCACTCAA TAAGCGCTTT
GCAACCTTGG CAAAGTACCT CCCTTTCCTC CCAGTCTTTG GAGGCGGTAT CACTCGATTC
CAGTGAGTCG TGGAAAAAAA AAGGCACCTT TACGCTGATA CTAATATTAT TAGGCCGGTA
TATGTAGGGG ACGTTGCACG GGCGGTCGAG ATATGTTGTC GTGACGATCC GATTGTTGTC
AGTCAAGTGG CTGGACGTAT CATTGAAGCT GGCGGACCGG ACATCTTCAC TTACCGCGAG
ATGATGGAGC TCGTGCTTCG CTATACCCAC CTTGAAGGTC GTCGAGCGAT CATCTCTTTA
CCCTACTGGC TAGGCAGCGT GCAAGGGTTC TTTCTGGAAA AGTTGCCTGA AACAATGTTC
ACCGTCACGC GAGATCAAGT GAAGCAGCTA CGGAACGATA ATATTGTATC GCCCCATCCA
CCCATGTTTG CTCAGAATTT TGAGGATTTG CTGAAAGCGT TTCCAAGTTC GGCACCGAGC
AGTGCGCCCC CTGGGGATGC GGGGTTGCAA AGCGTATACG ACATTTTGCC TACTTATTTG
GGGGTTGGGA AGAGGGAGGA GGGTAAGAGG ACGCATGGCC GGAAAAGTGC GAGTTTGGAC
GAGGTGAAGG GGATGGGGAA GCGGTAGTGT CAGGGCTTGT ACATGTTTAC TGCAGTTTAT
GCATTATGGG ATGTAGCAGT
 
Protein sequence
MITRRLASTV SVPPETKSPR KIVLVGAGFL GSYVVKALIA DPRNRIQIVS RHPQSLHSKL 
STLGAQILPP ASVDITSPSS TSELRKAFKG ASAVVSLAGL LVGSDKQMKA LQEDGARRVG
EAASEEGVGR VVGVSAIGAD LRGVTAYWRT KAKGEDAIRE YHPTATIIRP SLLFGPGDSF
FSRFATLAKY LPFLPVFGGG ITRFQPVYVG DVARAVEICC RDDPIVVSQV AGRIIEAGGP
DIFTYREMME LVLRYTHLEG RRAIISLPYW LGSVQGFFLE KLPETMFTVT RDQVKQLRND
NIVSPHPPMF AQNFEDLLKA FPSSAPSSAP PGDAGLQSVY DILPTYLGVG KREEGKRTHG
RKSASLDEVK GMGKR