Gene CNA02220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA02220 
Symbol 
ID3253567 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand- 
Start bp582327 
End bp583057 
Gene Length731 bp 
Protein Length113 aa 
Translation table 
GC content51% 
IMG OID638252554 
Product60s ribosomal protein l30-1 (l32), putative 
Protein accessionXP_566608 
Protein GI58258391 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0493078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCAACCGT CAAAAAGCAG CAAAAATGGC CCCCGTCAAG AAGAGCAAGT CCGCCAAGAG 
TTCCGAGTCT ATCAACACCA AGCTCCAGCT TGTTGTCAAG TCTGGCAAGT TCACCCTCGG 
TTACAAGCAG GCTCTCAAGC AGCTCCGATC TGGCAAGGGT ACGTTACATT CATTTCAGAC 
GGATGAGTAA GCGGACGGTG AAGGAAAATG GGCGGCTTTC TGGTTGATGG GGACTGGAGC 
CCGCGGGCTG AGAAGGTCTC CGTGCTGACG ATGGTTTTTA CATGCCTGTT TCTTTCCCTT 
TCCCGCTACT TGCACCAACA CCTATCTACT GTCTCTTGTT GCGCCTGGAT GGATACCGAC 
ACAGCCAAGC TCATCTTGAT CTCCAAAAAC TGCCCTCCCC TCCGCAAGTC TGAGATCGAG 
TACTACGCCA TGCTGTGAGT AATCTTTTGG CTCTTAAAGA ACAGGGTACT CATACCGTTG 
TTAAGCTCCA AGACCAATGT CCACCACTAC GACGGTTCCA ATGTTGACCT CGGTACTGCC 
GCTGGTAAGC TCTACCGAGT CGGTGTCATG TCCATCCAGG ATGCCGGAGA CAGTGACTTG 
GTATGTTTGA TCACACAAGT TCGTGTTCCC AGCTGATAAA TATATGTAAA TAGCTCCAGC 
AGCAGGAAAG TGCCTAAGCG TGATGCGTTG TATTTTCATA CGGGGCCATG CATGCTTTGG 
ATCGTCTGAG C
 
Protein sequence
MAPVKKSKSA KSSESINTKL QLVVKSGKFT LGYKQALKQL RSGKAKLILI SKNCPPLRKS 
EIEYYAMLSK TNVHHYDGSN VDLGTAAGKL YRVGVMSIQD AGDSDLLQQQ ESA