Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA02140 |
Symbol | |
ID | 3253573 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 565930 |
End bp | 567800 |
Gene Length | 1871 bp |
Protein Length | 515 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252546 |
Product | conserved hypothetical protein |
Protein accession | XP_566598 |
Protein GI | 58258371 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.044229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTATTGCTTT CCGACTATTA TGTACTGTGC TATTAGTTCC CTACCACGCC ATGCTCGCAC CCACCGTGGC CAAGATACCT CCCACCCCAG ACCTGCCAAG GGATCACCAC GGCCCACCCG CGAAACCGCT TGCCAGTCTC CAGGAAACAG CCGCACCCAA GTACTTTCGC AACCCATGGC CTTCATACAG AACAGCCTCC ATGTGGGACG CCTATCAAGC CTACCAGCGT GGAGCATCAA TTGCTCCTCA TCCATCCTTC TTCCAGGGAA GCCGGTTTTT TGATGGGGAA GAGCCTTATA GAGATCAGGA AGAAGATGAC TATGAAAGTG AACCAATCTG GACAGAATCT GATTCCATCA AAAAGAGGAA AATCTATATC CGGCCAGAAT TTTCAGACAT CAGACCGGGA GATGAGAAAG ACGACTGGAG AGACCCACCT GTGGGGCTGG TAGAGCCAGA TTGGGGCGGC AATTCGAAGA CGGGAGAAAG AGTCACTTGG CTGGGGCATG CCGGTGTGTT GGTGCAGATA CCGTGGAGGA TCATGGATCA GGAGCAAACC AGTAGAGGTG GGGCTACGTG CGGAATATTA TTCGATCCTA TATTTTCATA TAGGTAGAGC ACTTTAAATC TCTGCCATTC TTTCTTCCTG ACATGTCATC TTCAGATGCT CGCCCACGCA GTACATTGGC CCTGCAAGAT ACATGGATCC CCCCTGTTCC GTTTCTATGC TACCAGAAAT ACATATCTGC TGCATCTCCC ACGACCATTG TGAGTATCTC TGGGAGGCTA CAAGGACCTT TGTCTAATGA CAGCAGATGA CCATCTGGAC TACAACACTA TAATGGACTT GTGGAAGTAT CATCAGGCCA CTATCCACTT CTTTGTGCCT ATAGGTTAGT CACATTTGTT TAACACGCTT TTGTTGACGT CGGAATTAGG GCTCAAACCA TGGTTTACTG CTTCTGGTAT ACCATATCAT AGAGTGACAG AGTTGGATTG GTGGCGCGAA GCCATTGTAT CGTTTGAGGC TTCTCCGGAT GTGGACTATG ATCCTCATTA TCCTCCTGAT GATTATGAGA ACAAGAAGAG TATAGCCGAA GACCTCACCA AGACAGATAC ATCAGCACTC ACTTTGAAGG TCGCATTCAC ACCTGCTCAA CATCGTTCTG GTAGAAGTGT ACTTGACCAC ATGACGACGC TGTGGGGAAG CTGGTGTGTA GGTGTTGTTG AAGCGGCCGA TGCTGGTAAA GTTTTGAAAA GGGGAATGAA TGATTGGAAA GGGTTCAAGA TTTATTTTGG AGGGTAAGCT CGGGGACTGC ACGGTATCAA TCAGATTCGG CGCTCATGAA ACTTAACCAC CATAGAGACA CTGGGTATCG TTATGCAAGT GCTCCCGAAG GCGATTCTGA CGCCATTTGT CCTGCCTTCC AGCGTGTGTT CTGCCATCAT TTTCCTTTTT TTGCTCCACG CTGATCAAGA TTCTATCAAG AAATTGCCGA TTACTACGCA CCATTCAATC TGGCTCTCCT TCCTCTTTCA ACTGGATCGT CACTTCCTTT CCTCCGGACC GTTTTATCGC TGTCTTTGGA TCAGTATATT CTCACTTCAT CCCTCCACTG CTCGCCAGCA GATTCACTTG ACATACACCT CATCATTAAA AGCGAGAGAA CACTTGGGAT ACATTGGGGA ACGTTCTGTG ACGCAGACGA GGCGAGAGGA ACAAGAGTAG ACTTTGGAAG ATGCCGCAGA TCGTACGGCG TGAGCCCAGA GTGGGATACC ATTGAGGCCG AGAAAGGAAG ATTTGTCATA ACTGACATAG GTCAGACGCT TATTTTCCCG ACCACCACAG ATGACAATTA GACCATCGAG A
|
Protein sequence | MLAPTVAKIP PTPDLPRDHH GPPAKPLASL QETAAPKYFR NPWPSYRTAS MWDAYQAYQR GASIAPHPSF FQGSRFFDGE EPYRDQEEDD YESEPIWTES DSIKKRKIYI RPEFSDIRPG DEKDDWRDPP VGLVEPDWGG NSKTGERVTW LGHAGVLVQI PWRIMDQEQT SRGGATCGIL FDPIFSYRCS PTQYIGPARY MDPPCSVSML PEIHICCISH DHYDHLDYNT IMDLWKYHQA TIHFFVPIGL KPWFTASGIP YHRVTELDWW REAIVSFEAS PDVDYDPHYP PDDYENKKSI AEDLTKTDTS ALTLKVAFTP AQHRSGRSVL DHMTTLWGSW CVGVVEAADA GKVLKRGMND WKGFKIYFGG DTGYRYASAP EGDSDAICPA FQQIADYYAP FNLALLPLST GSSLPFLRTV LSLSLDQYIL TSSLHCSPAD SLDIHLIIKS ERTLGIHWGT FCDADEARGT RVDFGRCRRS YGVSPEWDTI EAEKGRFVIT DIGQTLIFPT TTDDN
|
| |