Gene CNA01820 details

Gene Information

• Locus tag: CNA01820
• ID: 3253806
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: -
• Start bp: 486751
• End bp: 491945
• Gene Length: 5195 bp
• Protein Length: 1290 aa
• GC content: 52%
• IMG OID: 638252515
• Product: transcriptional activator, putative
• Protein accession: XP_566547
• Protein GI: 58258269

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.203708
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCACTCCTCC CCCATCCACG TGTCCCACAA TCTGCTCCCG CTGCCACTAA CCCACCTACA 
CGCCGCCGTC CCGCCAACCG ACCTTCCGAC GTCGAGTCAA AACAATACTC GAGGCACTCC 
ATCGGTCAAC AATTTTCAGC CACCCGCAAC CAGCCCGCAA CTGCAGAGAC TTCAGTCCGT 
TACCGCGCCC ATAGACTGCA GTAGAGGAGA CCTTGCAAGC TCCCCTCCTT CCTATCAGGT 
ATGTGCTATT CCCAGCAGAT CCATTTTACA TTTTATACGC GGAAACACGA CAGGAGCGGG 
AGGATATTCG TCAGCTCATC GTGAAGGCGG CGCTGGACGG GTGGGCTTCT CGTCAATTCC 
ACAAGAAAGG CCAATAAAGG CTGTTGCCGA TTGCCAATGA AAAGTTTGCC TTCTATTGAA 
ACGGTGTCTG ACCTCCCTCT TTTGGCTTTC GTGCCGAGTC TTCTTGCTTT CTGTTCGCAT 
CTCTTGTCAT CCAAGCTTTG TTGTGGCAGG CATCATTCGG GGCCTCCAGC CTTTCTTCTC 
GTCCTTTGAT CTGTGGTGAA TGCAGGCTTA CGATGGACCG CGCGGTCTTC CCGCTACTTC 
CAATCACCAC AGCCTCTAAC AACACAAAAC CGACACCATT TCCACCCCGT CTCCACCCGT 
TATAGGTCCC TCTCCTAGGT CTACCACATC TTCAAAATCA TCTCCTGTAT CCACTACTTC 
AACTAGCACT GGTGGGACTT CTTCTAGGCT TCGTCCACTT CTACCGAAAC CAACAGCGCC 
TCGCGAGCCG TCTACTCGAC CCGTTAGCAC TGCAACCAAA CAGCAGCTAG CGGCGGCTAG 
AATGGACAAG CTTCCATGGC GCACTACATC GGGGGGGAAA AAGGGACCAT TCACTGTGGA 
TGCTGGAGGA GGGCAAGGTG TCTACAATGG GAAAGTAAAT AGTGCTCGGG TCCCGGAACG 
ACCCCCTTCT GCCGCGTCTT CCCGCCTCTC CAATCCTCCA ACACCTGCCA TGTCGCCTTC 
CATTCCAATC AATCGACACA ACTTTCCTTA CCCTCCACAG GGATACCAAT CATTCTCTCA 
ACCATCAAGT ATAGGACACA GCGGCAGTGG TTCTTTCCAT GGTAATGACC ATTCGTCGAT 
TGCCACCACC CCTACGCCAA TGACTCCTAT TGATATTGTT GGAGTGAGTT CTAGCGTCCC 
ACGAAACAGC TTTTCCCAGG GTGTTCAGCC CTCTTCACAC TCTCAACTAT CCTCTTCTAG 
ATCAAAGCGT TCTGTTCCCA TGATATCCAC TACTCCCGTA GAACCTCCTC CTTCCTCTTG 
GGGTGCATCT TTTCCTGATC AACAGGGTGA AAATGATGCG AATAGCAAGC CATTCGACTG 
GACGTCTCTT CCGAACCCCG CGAATTGGTT TTCTCCGTTG GGCACGGTTC AAAAGACCAC 
CTGTAATGAT GATCCCATCG ATCCAGCTGT ATTTGCCAGC CTTGCTGATC TGGTCGAGCG 
AAATCAGGGT AAAATGAACG ACAGTGCTTC CATCGATTTT ATGGGCGCTT TGAACGCAAA 
TACGTCTCCG AAAGCTGCTA GGAGCACTGC CCATTCAACT TCACATCCTG GAGGTACAAG 
CCTTTTGAGT CGTCGCTTGC AGCACCAACA GCAGACTAGC TCTGATGGTC AGAACATACA 
TTCAAGCAGT CAATCTTCGG CTAACTCTCC TGGCATCTTG CACAATTCCG GGGGGCTATC 
TGGATTCCCT GGTCCTCAGC AGCAGTACAA TCATGTCACC TTTGCACAGC CTGGTAAGGT 
GAGTAAAGGT GCATCTAACC AACCCTTGAC GCCTTGGCCT TTATCCGAGA GGGCAATGGG 
TTCGAGCGAG ACCCCCGTGA CAACACCCGG CGGTAGTGAT TTCGGAGTCA ACAGCCCCTT 
TGAGATGGGT ATTACCGGCT CGTGGCAGCA GGAATCGATG GCCAAACATG AGTTACAGGG 
CTCAAACAGT AGTTCACGAT ATCCGCCCAT TGCTCCACGT CGGCGTGAAG CACCTCAGCA 
TCCTGCTCCT GTGTTCCAGA CACACCGGGG AAGTGTACCA TCCTCCGAGC ATGCCTCGAG 
AGCCGGCTCT GAAGCTCCTC ATGACGGGCC CATGCCCGGC GGCGTTTCAC TCAATGGTTT 
ACCTCCTTTG CCGAACGGAT TGTCTCTTGA GCATCTTGCC CAGTATGGAG CTGCAGGTTT 
AGAAATGGCT TTGAGAGTGG GCATGGGTAT TGGTATGGGC TTGAGTCAGC AAACGCAGCA 
AACGAAGCAA ACTGTTGATG TTGCATCCCC GCCTTGGCCA CTTACCAAAA GTGTTCCTAC 
GCCATCCTTT TCTCAAAATC CGTCGTCCCC TGAAGCATCG TCTCGTAAGG GACGAAAAGA 
CTCAAACATC GTCAGCGACA TCCTTCAAGA CGACTTCCTC ACTGCTCGCG TTCCTAGCAC 
TCCTCTTATG ACCCCACCAC TCAATGGTTT TGGGTCTTTC CCAGTTACTC GTCGACCATC 
TCAGAGCGAT GCCACAAGCC CGTTACCCGA GGTTGGTCCT CCGGAGCAGG TGGCTGAGAA 
GGATCCTCTT GCTGCGCAAG TCTGGAAAGC ATACGCAAGA GCCAGAGATA CCTTGCCCAA 
CGGGCAGAGG ATGGAGAATC TGACCTGGAG AATGATGCAT CTTACACTGA AGAAGAAGGA 
AGAGGAGCAA GCGGCAAAGG AGAAGGAGGA AAGAGAGAAA GAAGATAAGG AGGCTGCTGA 
GAAGGAAGCA GCAGAAGCAG CAGCAGCAGC AACAGCAGCG GCAGCAACAG CAGCAGCAGC 
CGCTGCAGCC GCAGAATTGC CTCCTGTGGA GGAAAGACGA GGAAGAACAA AGGGGAAGTC 
AAGAATTGTT GGTTTTGCTG GAGCAACAAG CTCAAATTCC CAATCGCCAA AGTGAGTTAC 
CGTGTCAACA TCATGATGTC ATTTACTGAT TATTTTTCCT AGCGGCATGG ATATCGATTG 
GCGAGCAGCA AGCCGATCCC GTTCTCGCAT ACCCATGGAT ATTGATTGGC GTGCTTCTTC 
CAGGTCACGC TCCCGTTCTG CGGCTCCATT CCGCAACCCC TTCAGTGAAG CTCACGCTCA 
TCACCTTCTT GCTGCAGGCG GAACACCTAT CGCAGAGATG GGCCAATACA TGGCCGGACA 
TGGTAGTCTG AACATTCACG CCGCTAACGC CCACTCGACA AGCCATCATG GCAACCAGAA 
TCAATATCAC CATGCTTCAT CTCTCCCTGG TCCTTCTAGC ATGATGCTGC AAAGCTTGAG 
TCAGTTACCC GAGAAAGAAG GAGAGCAGGA TGAAGTGCAA CAAGCTGTCG AGCACATGAA 
TGGGGCTGAC TTGTACCCCG CCTCTGCACC TCAGAACAGG AGCGCGCTGG AGCATCTTCA 
GATGTCTCTC GCGAGTGGGC TTAATCCTTC CGAAGAAGCT ACGTCTAACT TACCTGGAAT 
CAATGGTCCA GGTCTCTATA CACATAGCCA AGAAAACTTC CATCCTCATT ATGGGTTTCT 
TCCTCGTCGT GTGCGAAAGA CATCTTTCGA CCACACTGTG AAATTGTTGG AAGAGGGTGA 
ACCATCCAGC TCTCCTCAAT TCATGTCCAA TCCTCGCAAG CGCCATGCCG AAGCCTCTCC 
TCAAGGGGGC GCGAATAGTC CTCTTCCAGA AGGTGACAGC GGCTTCCCCA CATCAAACTT 
CACCTTCAGC TTCCCTCAAT CCTACGAGAA TTTTTTTGAC CTAGCTGCCG CAAGTGCAAC 
TCCTTCAGGG ACCCAAGAAA ACAATGATGT GAACCATGAA GGTGATGACG ACCTTGCAGA 
CTTGACAGAC TGGGCAAGTC ATCCTGTTAC AGCGGATACG TCAGCGTTTG GTTCTCCTTC 
GGCGTTTGGT CACATTGAAC CCGGAATGTC CCTTCCTTCG ATGCCTCAAG CTACAGGCGA 
CAATCCTTTT GATTTTCAGC AGCTCATGCA CCTCTACCTC AATGCAAACT CATCTGCGAG 
CCCGTTTACC CACATCAATC CCTCTCAAGT TCTTGGGGCC GTGCCCGGTC AGGCCGCCAA 
CGAATTCTCT CCCAGTGCCG TCTCTCCCCA AAGCGGTGCT CCTACGCCCA GTAACAACAG 
CTCAGGTAAC AACATCCGGC CATTACCAAA AGCTGTAGGC GGTAAGGCTG TAGACAACAG 
ACAGATGCCG CCACCGAACA GATCTAGCAG TACTCCTAAT CTCGCTGCTC TGAGGATGTC 
TTCTCAAAGC GAATCATCAA AGCACGGTCG TACTGCCTCA ACTAATGCAT CAGGAAACGC 
TGGGTCTGGT TCCAGTAAAG GGAACAAGGG ATCAAGTGGA AATAATAAGT CCCGACCAGG 
TACGCCGACG AGTGAAAATG AAGGCGGGCC AGGCTCTATC ATGCCTAGTG GTGAGAATCC 
CACAATGTGT ACAAATTGTC AGACGACAAA CACTCCTTTA TGGAGACGAG ATCCAGATGG 
GCAGCCGTTG TGCAATGCGT GTGGACTTTT CTACGTGAGT ACTGTCTTTC AGCTATATAA 
TTAGAGACGT TCTAATGACC TATCAGAAAC TGCACGGTGT CGTTCGACCC TTGTCGCTCA 
AGACGGATGT TATTAAGAAA AGGTGCGTTT GCAGTCCGGC GAGAATTGCA ATATCTAATC 
AGAGTGTGTA GAAACCGAGC GGGTCCTGGA CCGAAAGAAA GCAACCCTTC CCGCAAGAAC 
AGTGTCGCTT CGTCTAAAAA TGTGTCTGTG CGGTCAAAGC CCAGCTCGCC AACAGTTGCG 
TCGTCTGCAA ATTCCGGTGG CGGAAGCAAG AAGGCAAGGC ATGCTTCTGA TGCTCCTGTT 
GAATGAGCGA ATGAATAGGA GCAGTGGGAG CGGAGATTCG GGGAGAGGCG GTTTGTCGCT 
CGCGTAGCGG GCTCTGATTA CGCCTGACGT TCCACTTTTA TGTTTTTCAC TTCCATATTA 
TTCGGTTACC ATTTATCCTA CCGTTTTCAA ACTTATACCG TTGAGCTACT CTCGGGCCCG 
TGCATCCAAC GGTACCATGT ATGAATTCTT AAAACCTCTG GGTCTCTAAA AAGAGGCTCG 
GTTCTTAAAT GTTAGATACG ATTACAACTG TTTATTGGTT TCTTTCGGTT GAGTTTTGGG 
GAGATTATTT AGGACGCTCG TTGATCATCA TCGAA 

 

Protein sequence

MDKLPWRTTS GGKKGPFTVD AGGGQGVYNG KVNSARVPER PPSAASSRLS NPPTPAMSPS 
IPINRHNFPY PPQGYQSFSQ PSSIGHSGSG SFHGNDHSSI ATTPTPMTPI DIVGVSSSVP 
RNSFSQGVQP SSHSQLSSSR SKRSVPMIST TPVEPPPSSW GASFPDQQGE NDANSKPFDW 
TSLPNPANWF SPLGTVQKTT CNDDPIDPAV FASLADLVER NQGKMNDSAS IDFMGALNAN 
TSPKAARSTA HSTSHPGGTS LLSRRLQHQQ QTSSDGQNIH SSSQSSANSP GILHNSGGLS 
GFPGPQQQYN HVTFAQPGKV SKGASNQPLT PWPLSERAMG SSETPVTTPG GSDFGVNSPF 
EMGITGSWQQ ESMAKHELQG SNSSSRYPPI APRRREAPQH PAPVFQTHRG SVPSSEHASR 
AGSEAPHDGP MPGGVSLNGL PPLPNGLSLE HLAQYGAAGL EMALRVGMGI GMGLSQQTQQ 
TKQTVDVASP PWPLTKSVPT PSFSQNPSSP EASSRKGRKD SNIVSDILQD DFLTARVPST 
PLMTPPLNGF GSFPVTRRPS QSDATSPLPE VGPPEQVAEK DPLAAQVWKA YARARDTLPN 
GQRMENLTWR MMHLTLKKKE EEQAAKEKEE REKEDKEAAE KEAAEAAAAA TAAAATAAAA 
AAAAELPPVE ERRGRTKGKS RIVGFAGATS SNSQSPNGMD IDWRAASRSR SRIPMDIDWR 
ASSRSRSRSA APFRNPFSEA HAHHLLAAGG TPIAEMGQYM AGHGSLNIHA ANAHSTSHHG 
NQNQYHHASS LPGPSSMMLQ SLSQLPEKEG EQDEVQQAVE HMNGADLYPA SAPQNRSALE 
HLQMSLASGL NPSEEATSNL PGINGPGLYT HSQENFHPHY GFLPRRVRKT SFDHTVKLLE 
EGEPSSSPQF MSNPRKRHAE ASPQGGANSP LPEGDSGFPT SNFTFSFPQS YENFFDLAAA 
SATPSGTQEN NDVNHEGDDD LADLTDWASH PVTADTSAFG SPSAFGHIEP GMSLPSMPQA 
TGDNPFDFQQ LMHLYLNANS SASPFTHINP SQVLGAVPGQ AANEFSPSAV SPQSGAPTPS 
NNSSGNNIRP LPKAVGGKAV DNRQMPPPNR SSSTPNLAAL RMSSQSESSK HGRTASTNAS 
GNAGSGSSKG NKGSSGNNKS RPGTPTSENE GGPGSIMPSG ENPTMCTNCQ TTNTPLWRRD 
PDGQPLCNAC GLFYKLHGVV RPLSLKTDVI KKRNRAGPGP KESNPSRKNS VASSKNVSVR 
SKPSSPTVAS SANSGGGSKK ARHASDAPVE