Gene CNA01780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA01780 
Symbol 
ID3253782 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand+ 
Start bp474943 
End bp476247 
Gene Length1305 bp 
Protein Length266 aa 
Translation table 
GC content48% 
IMG OID638252511 
Producthypothetical protein 
Protein accessionXP_566544 
Protein GI58258263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.88268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGGT GCTCGCTCCT CTACTGCGTG GTAACGGATA ATATATTCTT CTTAAGGCAA 
TAGCGCATAT ATGTCCAGAC TCTACGTCCC AAGTTCGCAA TTACCAACAT ACACATGCAC 
CACTTCGCCT CGGCAGTTGC AGCTCTCTTA CTTTTGGGAT TTTCTCGAGC CCAAGAGCTT 
TCCTGCTCCT CGCCCAAAGT CAACATCGAC CCATGCCTCA GCCCTTCACC TGGCGGTCTC 
TTTGTGTTTC GACAACGCTT CGAACCTGAT GTAGGAGATG ATTTCGGCAG CTGGAATATA 
GATGGGCTTG AGGTTCTGAC GTAGGTGCGG ATGACTAAAT GCCGTGAGGG GCTAATGATT 
ATGATCCGGC AGCTGTGATA CGCAACAACC ACAAAACGAC ACCGCTTACG CCCCTACGTA 
TAATCATGAA GAAATCGGCT CTTTCTGTCT CAAGTCCACC CTGTTTTCCG AGGAAAACGC 
ATTTGCGAAT TCCGAGAAAG CTTGGGCTCA GAGTGAAGTG GGAGAAGGCG TTGAAGAAGT 
TTGGGAACGA GCGGTCAGTG CATTTTATCT CGCCGAGCCC TTTTCCTCGG GAAAATTACT 
CATTGATAGT GTAGTGGAAC GTGGCAGGAA GGTTCATTTC TACTTTCCAT CCTGAATGCT 
ACAAGAATGC TCAAAGGGGC AGTGGTGTAA ATTCCTTCAT CTTCAAGGCA TGACAGATGC 
TGAGGTTCCG CTGGACTTAG GTACCGGAAT TCTTCGCCGT TTTACAAAAG TTACATTGGA 
GATTTCCCAC AGCTCAACTA CTTTCAGATA ATGATGTACG TAGTCAGAGT CCCAAAGCCT 
TGTTGAATGG GACCCTGACA TCGGACAGAT CATCCCGTCT GAGGATATAA GCTACTCCCT 
TGCAGAGCTT ACAAGCGCAC TATCCATGGG CGGGAATTTC CCGGTGGTGA GTGACATTAG 
GAGCTAACTG GTATGAGCCA TATTGACAAC ACCAGGTCAT CTGTGACAAT ACCACACTCT 
CCACCATCCT GTGGCCTTTA CTTGTCCGAG GCTCCTTTGC CACGGGTACT TTTGAACCTA 
CCTCGATGTT GCAGCGTGAA TCAAATTGCC CTCAAGATGG AATCATGTAA GTAGGCTGAA 
GACTGTGCAA TATACAGCAA TGTACATTAT GGGTCGACGA TGTTGATAAC ATAATACCAG 
CTATCAACTT TCTAACAGAC GCCCTGTCCC AACCACGACA GCCACTTGGG ATCGTATCTT 
TCGGCCTTCA CCTCGTCCTA TCACCCTTTC ACATGACGAG TCGAA
 
Protein sequence
MQRCSLLYCV RIYVQTLRPK FAITNIHMHH FASAVAALLL LGFSRAQELS CSSPKVNIDP 
CLSPSPGGLF VFRQRFEPDV GDDFGSWNID GLEVLTCDTQ QPQNDTAYAP TYNHEEIGSF 
CLKSTLFSEE NAFANSEKAW AQSEVGEGVE EVWERACSGT WQEDAEVPLD LGTGILRRFT 
KSESQSLVEW DPDIGQIIPS EDISYSLAEL TSALSMGGNF PVVICDNTTL STILWPLLVR 
GSFATGTFEP TSMLQRESNC PQDGIM