Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA01760 |
Symbol | |
ID | 3253833 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 471294 |
End bp | 473648 |
Gene Length | 2355 bp |
Protein Length | 708 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252509 |
Product | hypothetical protein |
Protein accession | XP_566542 |
Protein GI | 58258259 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5533] Ubiquitin C-terminal hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGCTCATAGC TCTCGGACCC TCCCGAGACA TAGCATCTAC GCAATGAGAT GAGGAAACGA CGCACGACTC CCAGATCAAA CATCTCAAAG AACGCCAACA TCAGCAAACA ATTGGCCACT ACACTGCCTG AGGGGGAAAC GCAGTCCACA AGAAAGATAC AAGCTGCAAG CGTCGAGAAG CAAAAACCGG TAATAGAGTT ATTAGGCGCC GGCAGATCCA CTCTTGTCTC CAACGACGAG GACTACTTAT CTCCTCAAGT ACCACCCAAA CCCATTATCT CTTTGGAACA TCCATCGTCT ACAACTTCGA CTATCAAGGT CGCCACTACC TTTCCGCACA TCGTGTTTGA TGATCTCTGG ATAGATATTC TATCATTTTT TGCTCAAGTC TATCTCGCAT TATACGAAAT GACTCTTGGA ATTGGAAAGT GGTGGGCCGG TACTGAGATA GAAGATAGCC ATAGGGGCAA AGAGACAAAA GAAAAAGAGA TCAAGGCCAA GAGGCGTAGG CGAAGGGTCG AGCCGTCGAG CAATAGTTCT GGTAGGTTTT TTTCTTTCTC CTTTTCCCTC GTTATATTAT ATGTATGATT AGTTTACGGG TGAGAAACAG ATTCGGCAAC AGGCCGATTC TTTCCTGGCA TGGTAAATTT AAGTGGGACG CTGTGTTATA TGAACTCTGT TCTTCAGGTG GGTTTCATAG CATCGGCTTC TCATGCTTCA GTCGGACCTT ACTTGATGCT CCTTTTAGTC TGTCGCCTCC ATACCCTCAC TCATCATCCA TCTCGAAAAA GTTATCGATT TGGCGGTAGA AGTGGACATA CCGACCCATG TCACAGATGC TCTTCTCGAT GTTATCCGGG ATCTCAACAC TCCCAATAAA CGCCCCCCAC CTGCTCTTCG ACCACATAAC CTTCTCACTG CACTATATCC TCTCCCTGCG ATTCGACGAC TATTGAGTAC TCATGAGCAG CAGGACGCCC ATGAACTATT TCTGGTGCTG GCTGAGGCGG TCTCTGATGA AGTTGTCAAG GTTGCTGCAG AGGTCGCCAA AGTGCGAGGC ATAGGAGAAA TTATCTCATT ACAGGGATAC TTGTCCGGCA AAAATGATGG AAGTGACCAA CCTAGGAGAG CGGGCGACAT GGAGGGAGCC AAAAGGAGGC AAAGAATAAG AGGTGTGGCT CAACCATGGG AGGGCTTGTT GGCGAGAAGA AGAGTGTGTC AACGTTGCGG TTGGAGTGAG GCTATTAGGA TGGATACTCT AGGGGGGATT GAATTGCCTG TCCCGTTACA CGTGTGTAAA ACAATTCACT CAATGTGCTG TAGCTGAACG CTTGTTTTTA GGGCAATACC ACCCTTGACG CCTGTATAAT GGAGTACCTC GCGCCCGAAA TACTTTCCGA TGTCACATGC GAAATGTGCT CTCTCAAGCT CACACTGGAT TACTACACTT CCGAAGTTGA GCGATTGTCG GGCTCCTCCT GTAAAAAGAC TTCTACGAAG GAAGAGAATG AGCCCGGTAG TGACAATCAA GTCAGTGCTA GTCGGAAAAA GAAAGCTCGC GAAGCCAGGC GCGCAGAGAC CAGGCTACGA GAAATGGTCA ATTCCAACAC AGTTAGCGAT TTTGGCGAAC CTAATCTAAC GCCCCTACCG TCATCCGGCT TGACTGCGCA AATACCGGTC AAATGGCTTA CGGCTAAAAC AGCGTCCACT CGACAGTGTG TCATAGTTCG TCCCCCCCAA TCTCTCCAAC TACATTTTAT CCGCTCGGAA TTCACCATGT ATGGGACGGT GCAAAAGAAG ACCGCAAAAG TCTCATTTCC ATTGTTATTA GATCTCACAA GATTTGTCTC TGACGGAGTG TGGGAAGAAA GAGGCGGGAT AAAAAATATG CTCGCATCAG TCTCAACCGA AAAAACGATC CCCCCAATAA CAGGACAAAG GGTAATATAC CAACTTGAGT CAGCTATTCT TCACTACGGA TTTACCCACT CTTCTGGTCA TTTCGTCAGT ATTCGACGGA AACCCTCCCC GTCTTTGACC AAAGAGGAAA AGTCATTCCG ACCCTTGCAA GTGGCAAAAA ATTGTCCTGA TGGGTGTAAA TGCCAGGATT GTGTTTACTT TGGGCAGGTG AGGGATCTCG AAAATACGAA AGTACCAGGC AGAGGATGGC TGCGGATTAG CGATGCAGAT GTAGAAGAGG TCGGCGAAGA GGCACTTCAC GAAGCTGGTG GGGCCGTCGT CATGCTTTTC TATGAGCGTG TCATGGAGTA TGTAGCAAAA AAAGTCGTGC ATGATGAGCG ACTTCAGGGA GACGGTGACA GCCAAGATGC TGGAGGTTTA GAAGATAACA TTTAA
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Protein sequence | MRKRRTTPRS NISKNANISK QLATTLPEGE TQSTRKIQAA SVEKQKPVIE LLGAGRSTLV SNDEDYLSPQ VPPKPIISLE HPSSTTSTIK VATTFPHIVF DDLWIDILSF FAQVYLALYE MTLGIGKWWA GTEIEDSHRG KETKEKEIKA KRRRRRVEPS SNSSDSATGR FFPGMVNLSG TLCYMNSVLQ SVASIPSLII HLEKVIDLAV EVDIPTHVTD ALLDVIRDLN TPNKRPPPAL RPHNLLTALY PLPAIRRLLS THEQQDAHEL FLVLAEAVSD EVVKVAAEVA KVRGIGEIIS LQGYLSGKND GSDQPRRAGD MEGAKRRQRI RGVAQPWEGL LARRRVCQRC GWSEAIRMDT LGGIELPVPL HGNTTLDACI MEYLAPEILS DVTCEMCSLK LTLDYYTSEV ERLSGSSCKK TSTKEENEPG SDNQVSASRK KKAREARRAE TRLREMVNSN TVSDFGEPNL TPLPSSGLTA QIPVKWLTAK TASTRQCVIV RPPQSLQLHF IRSEFTMYGT VQKKTAKVSF PLLLDLTRFV SDGVWEERGG IKNMLASVST EKTIPPITGQ RVIYQLESAI LHYGFTHSSG HFVSIRRKPS PSLTKEEKSF RPLQVAKNCP DGCKCQDCVY FGQVRDLENT KVPGRGWLRI SDADVEEVGE EALHEAGGAV VMLFYERVME YVAKKVVHDE RLQGDGDSQD AGGLEDNI
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