| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA01660 |
|---|
| Symbol | |
|---|
| ID | 3253448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 444795 |
|---|
| End bp | 448886 |
|---|
| Gene Length | 4092 bp |
|---|
| Protein Length | 1246 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638252500 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_566526 |
|---|
| Protein GI | 58258227 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTATCGTTA TCTCCCAAAT CATCTCCACA ACATGGCTCA TGCCTACACC AGAGAATAAA
CCAGCCGGAA AGGATTCAGA TCCTTCCTCT TCCTTCCCCA TCTCATCTCC GTCTTTCTGG
GCAGAAGCTG CCAACATCCC TATACCCCCA GTTGACCACA AGCATCCTCG CTCTTCGCCG
GCCGAAGCCG ATACAGGAGA GGTTTCTTCT CGTGTACAGG ATGACTCGCC ATTGCCCAAA
CGCCCTCGCA CTTCCACAAA GTCACCGGAT CATGGCTTAA CATTTCTCCC TAATCCCCAG
GACATTGACC CCGATGATCC ACAGGCTTAT TTAGCGAACC CCGAGTATGC ACCCAATAGA
TTTGGGGATA TAGGAGATTA CATGCGCAAA AAGGAGATCA AAGTTCAAGC GCAGAATGCT
AGCATTGCGG CCTCAGTAGC TTCTGGAACA CTTCCTCAAA TATTCGCGGG ATTGTCCTTC
TATATCAACG GGAATACCCA GCCTTCAATG GAGCAGTTGC GAAAGCTCTT GCTTCAACGT
GGTGGGACGG TCTACCCAGT CTTGAGAAAC AAAACAATGG TCGACTATAT TATTGCACCT
GTATTGACCC TGAAGAAGCA TGAAGAGTTT AAAAGGCACA AGGTGGTGAA AGAGGGATGG
GTGGTTGAAA GTTGTCGGCA GGACAAGCTA TTGGACTGGA GGAAATGGAG GCTGCAACCT
GATGGTGAAG GGTCAGAAGC GGGCGCAAAA GGTTTAGAAA GTTTCTTTGC CCAAAAAGCC
AAAGCCAGAC AGGATTTCGT GGAACCAATA GAGGAATCAA GTAACGATCC CATAGATAAA
AAATTGGCTG CTCCTGTGGA TGAAGATACA GCACGTAACG TACCATCAGA AGTTGTAAGC
ACGTCCTAGA GCCGCTTCTT ATTCATCTAC TGATGAAAGG ACTAGATCAA TGTCACACCC
ACCAAGCCCA TTCCCATGCA GCTTCAGCGC CTCTTAACCC CCCGCAAACA ACGTCACGCA
CCTATTCCTA TTTCCCCTGG CCAACCACCA CCATCCCCCA CTTTTTCAGC ACCGGTATCT
CCAAAAATCC AAAAACCTGA AGGAGCATGG GAGCATTACT ATAAAAAGGA GTCCAATGAA
CACGCCGCAA AAGCCCTTCA GTCGGATACG TGGCGAGCAC AAAATACTGC CGAGCAGGGG
AATGCTGGAG GGTTCATTGA TGGCTATTAT CAAAACAGCA GATTGCATCA TCTATCCACC
TGGAAGGCTG AATTAAAGGT GCTTGTCAGG GATGCACAAA AGAGATCTGA AGAAGCCTTG
GCGAAAGCTG CGGTGAAGGA GCTTGCTGAA GGGGGCGAAG AGCGCGGTCA GGCCGTTCAT
TCCCTCGCCA AATCCGTTTT GCCGTCGATT CCTCTTCCTG CAGTACCATC TGATTCCGCC
AACCGTGTCA TCTTTCATGT CGACTTTGAT GCCTTTTTTG TCTCATGTGG TCTTGCGACC
CGCCCACACC TTAAAGGCAA GCCTACAGTG GTGTGTCACT CATCAGGAAG AGGTGTGGGA
AGTACTTCTG AAATTGCAAG CTGTTCATAT GAAGCGAGGG AGAAGGGGGT TCGAAATGGA
ATGAGCTTGG GCAGGGCCAG GGAATTGGTA GGACCCGATC TCAAAACAAT GCCGTAAGTG
CTCTTTCCCA AAGCCTCTTC ATCCACTGAC CCTGTCATCT TGTCAGATAC GAATTTGAAA
CATATAAAAG ATTTTCACTA GCCTTTTACA CCGTTTTGAT GGCTTATGCC GACGAACTTC
AGGCTGTGAG TGTTGATGAA GCACTTATTG ATGTAACAAG CCATGTGGCG GCAAGAGCGG
CGTTGCCACA GGAGACAGCT GTTGGGCAGA AAAGAGAAGA AAGGGACCCG GCTGTAGAGT
TGGCAGAAAA GATCAGAGAT GATGTTAGGG AAGTCACGGA CGGATGCGAA GGTAAGCCCG
TAAGTTCTCA GCACTAGGAA GTGGCTCAAA CCAGAACTTA GTGAGCATCG GTATTGCCCA
TAATATTCTC CTTGCCAAGC TGGCAACAAG GCATGCGAAG CCTGCTGGTG TCTACCATCT
CATTTCAGAA GCCATACCTT CCTTTGTCCA TCGCCTTTCA GTTGAAGATT TCCCTTCTGT
TGGGTACTCT ACCAAATCCA AAGTGGAAGC AGCATTTAAA ACAACAAAGG CTGGCGAACT
ATTGGATATA AGTAAAGGAA GATGGAAGAG TGTTCTAGGT GAGAAAACTG GTGAGATGTT
GTGGGGTTAC TTGAGGGGAA TAGACTCGAG GAAGCTAGAA GGGGATAAAG TCAGGAAGAG
CGTTAGTGCT GAAATGAATG TGAGACTTTC ACCTTCCCCC TTGGACTTTG CGTAAGGACT
GACGGAATGA TAGTATGGAA TACGATTTCA AACGCAAGTA CAAGCTGAGC AATATGTCCA
CGATCTGGCA GCCGAAGTGT CCAAGCGCAT GAAGAATGTC GGAGTCAAGG GCAGGCAGAT
CACCCTTAAA TTATTAAAGC GACATCCAGA TGCGCCTGTA GAACCACCGA AAGTGCGTAC
ATCTGGTTTG AGATGTTGTT GCGCCTGCTG ACAGGCAATT CCTAGTTTTT GGGGCACGGA
TGGTGTGAAA CGTATAACCG CTCTTCTACT CTTTCTGCTC CTGGCGGCGG ACCAACGGAT
GACCCGAAAG TTTTGGGAAC AGAAGGTGTA AAACTTCTGC GGTCCTTGAG CATTGACCCT
GTTGAATTAA GAGGAGTGGG TATACAGGTT ACAAAACTTG ATACTGAAGG AACAGAAAGA
GGACAAGTTG ATAGACCAAC GGGACAAAGG ACTCTCAATT TCGCAAAGCA GTCAAAAAAT
GACACAGAAC CTGTAGCTGG TCCCTCTCGG CTTCCAGCAC AAGCTCAGAA TACAGAAATA
GATGGCTTGG ATGCCGAATT TTTAGCAGCT TTACCGCCTT CTCTCGCTTC TGAAGTTTGC
CGCGACCACG CACTTAACAA TTCAAATGCC ACGAAAGCAG TTGCTGTGCA GCCTTCCCGA
ACGCCGCCCC TGGAGATCAT CTCCATTCCT TCTTCTACCC CTCCTCTCAA AGCTGAGTCC
CCACGCTCGC TTCGACCGCC TTCTCCTCAA GCAGATACTT CTCCCGAAAA ACCCATCTCT
AAGCTCAGAG GCCCCAATGA GGCTGCCCAC ATTGCACGCC AGTTACGGCC TAAAACAAAG
GTTCAGATGA AAGCAGGCAT GGTGGCCGAG GGTCCGTTAT TCGGTGCTTG GTCAAAGGCT
CGGGAGAAGA CCGTCGAAGT CGAACTTGAC AAAACTCGAC ACCAAAAGTC AACGATTGTC
GATCTCACTA ATACTTCGTC CCCGCAGGGT ACGGGATCGG ACAACAAAGC GGAACTCGAC
GAGGATCAAA TTGTTCCAGG GTATACTCTA GCCTACCTTC GCTCACTTGG AATTGATCCA
GATGTCTTGC TAGCCCTTCC GAAGGCCATG CGCAAGGAAG TTATTGTTCA AGAGGAAGAA
AATGCCCGGC GCCGACAAGC GCTCTTTCAA CCTGGGGATA GATCCAGATC AAGAGGGACG
AGTACCAGTG TCTCACCTGT CAAGTTGGGA GGTGTCGGCG CGTACAGAGG CCGCTCCACA
TCACGGTCAA TCCCGCCGCA GCAGAGACAG AGTGTCAAGA TCATCAGGCC GCCCAAACCC
GCTCTCATGA ACTCGACCGA GCTTCCCGAT GTGCTCAGGA CTATTGAATT ATGGATCGAG
TCCAGAGAAG ATAGTCCGCC GGCAGATAAG GATGCTATTA AAGTGGCTGC ATTTCTCAAA
AAATGTTTGA ATGATGGCGA GGGCAAGGTT GGGGATGGAG TTGAGAAAGT CGTCGAGGTG
CTGCGATGGA TGAGAATGAT CATAAAAGAA AAGTGGGCAC AGGACGAAGG GTTAAACGAG
GGTGCGAGCG AGGCTGGAAG GGAATGGTGG AGAATATGGA GACAAATGAG AGATGAGGTA
AACCTTATCT GTGTAAAGAA GTTTGGTGCG GGGTTGAGGA TCTGATTTTT CTTGTTTGAA
TTCCTGTTGT AT
|
|---|
| Protein sequence | MPTPENKPAG KDSDPSSSFP ISSPSFWAEA ANIPIPPVDH KHPRSSPAEA DTGEVSSRVQ
DDSPLPKRPR TSTKSPDHGL TFLPNPQDID PDDPQAYLAN PEYAPNRFGD IGDYMRKKEI
KVQAQNASIA ASVASGTLPQ IFAGLSFYIN GNTQPSMEQL RKLLLQRGGT VYPVLRNKTM
VDYIIAPVLT LKKHEEFKRH KVVKEGWVVE SCRQDKLLDW RKWRLQPDGE GSEAGAKGLE
SFFAQKAKAR QDFVEPIEES SNDPIDKKLA APVDEDTARN VPSEVINVTP TKPIPMQLQR
LLTPRKQRHA PIPISPGQPP PSPTFSAPVS PKIQKPEGAW EHYYKKESNE HAAKALQSDT
WRAQNTAEQG NAGGFIDGYY QNSRLHHLST WKAELKVLVR DAQKRSEEAL AKAAVKELAE
GGEERGQAVH SLAKSVLPSI PLPAVPSDSA NRVIFHVDFD AFFVSCGLAT RPHLKGKPTV
VCHSSGRGVG STSEIASCSY EAREKGVRNG MSLGRARELV GPDLKTMPFS LAFYTVLMAY
ADELQAVSVD EALIDVTSHV AARAALPQET AVGQKREERD PAVELAEKIR DDVREVTDGC
EVSIGIAHNI LLAKLATRHA KPAGVYHLIS EAIPSFVHRL SVEDFPSVGY STKSKVEAAF
KTTKAGELLD ISKGRWKSVL GEKTGEMLWG YLRGIDSRKL EGDKVRKSVS AEMNYGIRFQ
TQVQAEQYVH DLAAEVSKRM KNVGVKGRQI TLKLLKRHPD APVEPPKFLG HGWCETYNRS
STLSAPGGGP TDDPKVLGTE GVKLLRSLSI DPVELRGVGI QVTKLDTEGT ERGQVDRPTG
QRTLNFAKQS KNDTEPVAGP SRLPAQAQNT EIDGLDAEFL AALPPSLASE VCRDHALNNS
NATKAVAVQP SRTPPLEIIS IPSSTPPLKA ESPRSLRPPS PQADTSPEKP ISKLRGPNEA
AHIARQLRPK TKVQMKAGMV AEGPLFGAWS KAREKTVEVE LDKTRHQKST IVDLTNTSSP
QGTGSDNKAE LDEDQIVPGY TLAYLRSLGI DPDVLLALPK AMRKEVIVQE EENARRRQAL
FQPGDRSRSR GTSTSVSPVK LGGVGAYRGR STSRSIPPQQ RQSVKIIRPP KPALMNSTEL
PDVLRTIELW IESREDSPPA DKDAIKVAAF LKKCLNDGEG KVGDGVEKVV EVLRWMRMII
KEKWAQDEGL NEGASEAGRE WWRIWRQMRD EVNLICVKKF GAGLRI
|
|---|
| |