| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA01450 |
|---|
| Symbol | |
|---|
| ID | 3253629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 391049 |
|---|
| End bp | 395055 |
|---|
| Gene Length | 4007 bp |
|---|
| Protein Length | 1089 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638252479 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_566613 |
|---|
| Protein GI | 58258401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTATATTCA CCCTGCCATT CCTAGCGTCC ACTTCTCCGT TATCTTGCAC AGCCGTCGGA
ACTGCCCGTT GCCGTCTCCT TGACTGGCGC ACTTAACTCT ATCAGTCGCC CCTATAATCC
ACCAAAAAAA TGGCAGATCC AGCCTCACCC CCATCCTTCG ACGCCATCTT CGCCCAGCAA
CCAGTCCGTC GCTCCTCCTC CACATCCACA TCCTCCTTTG CCAACTACAC CTACTCAGCA
CTGCAGCAAC ACCAGCAGTT CAACTCGGAC GCTCCTCTTG TCGACGAACC GCAATCCTTG
TCAGAGCAAA CTCGAAAGCA GCAGAGAGAT CCAAGCAAGG ACAGCAGTAA TAAGCGATAT
TTAGATATGA TGTCTGGACT TGCGGATGGT TACGGTGTGA TCAACGGAAG AAGACAAGAG
TCATTGAGAA AGGAGTCTCT GCCGTTCAAT CCACAAGAAG ATTCGACGCT CATCGCGACA
GCGCCGAAGC GAGGTGAGAG AAACGGATTG GGACGTAATG GATACTCTTC ACCTATAGGC
GACATCATGT TTGGGCCAGA ACAAATAATT CGTAATCAGC CTCAGCGACC TTCACAACAG
CCATCATGGG GAGAAGGCAG GATATCTGAA CAATCAGTCC ACTATGCCAG CGTTCAACAG
CCGCAATATA GTTCTTTCCA GTCCTCTGGA CCCGGCGCAG GCTCGACCGG AATGGATTAT
TTGCCGCCTG GAACAGCAAG TTCAATGAAT GACACAATGC TCTCTAATCA AGTTTCTCCG
TATCTTAGTC ATGACGCTGC AAGTGAGGGC CGGCCACAAC AACAACAGCA GCAACAGCAA
GGAGAATGGG GACAAGAGTT CATTGGAGTG GAGCAACAGC AGCAGTATGC TCAAGGAGAG
GGTCAATCAA ATGGGATGGA GGATATGTTG ACGATGGGGG ATGAAAGTCC CTTTGAAAAC
GAATTACAAA GAGTGTAAGT ATCTCTTGAA AAGATCGTTT GACCCTGTCC AAGAATACCC
TGCAACATGT GATATACTAA CATGTTTTAC GTTTTTAGAA TATCGAACAC CTCCCACCCT
TCGCAGTATC CTTCGAGAAC AACTTCACCT TTTCCTCAAC AATCACAGTC CAATATAGTC
CCGACTTCGA CAGGTAACCA TGTGCGGACA GAATCTTTTC CTGCTTCACG ATCGCCAAGC
CCGTTTCCAC CTCAACAGGC ATCGCAAACA GAAGCGCCCA ATCATGTCGT TTCACCTCCA
AGCATGGGGC AGCCCACTTA TCCTCGTGCA TCCTCTTCAC CACGTACCAA CCCTAACTCT
CCATTTTTCA ACAAACCGCA ATCGCCTCCA GCTCTCATCA TTCCCAATTC TCCTGTTCTC
CCCAGTATTG TGACTCAATC CACATCAAAC AATCACTCCA AAGGATTGAA TCAGTCGCAC
ACAAGACATG CTAATAATGG CGCTGGAGGA TTATTTCCGC CGTCAAATCC AGCATTAGAA
CATTTGACTG GCATGGCGGG TATCAGCCCT ATTGCACCCA ATGCAGATGG ACCGATGATC
TGTATCCAAC CCAGTACACC GATAAGTGGA TTGAAGGAAG GCAGAGGCCT ATTTGATGCT
GCTCTTCGTC GGGCTGGAGG TGCTCAGAGA CAAGGACCGC AAGGACAAGG AGAAAGTCAA
CAGGATCAGC AGCAAGACGG TTTCAACGTT CCACCTCCAC AATCGCACCC TTTACCACGG
ACATCATCTT CAGATCAGAT CAATCAGGAT GTAGAAATGC AAGGCATGGA TTTTGCGGCG
CAGATGCAGT CATACGAACA ACAAGGCTGG GCTAGCGATA CCTTGCGAAT AGCAGGACCG
AGTCGCCCAC GAGCCAAATC TGATTCCATC ATACCATCTC CTACGGCTGA TTCATTTGAT
CGACAAGCGT TCCTCGCTTT CATCGGCGCA GGTAATGCTC AACCGCCCCC TTCGAATGTT
GAGATGCAGC CTGGATATGT TGATGTCTCA GAGCAATGGC GCAATACTGT GAGCGCATGG
AAGGCCGGCC TGGGAGGAGG CGAGCTCAGC AGCCAGCCTA CGCTTGATCC GAGATTATTG
CCAGGAAGAG AGAGCAATGA AGCGGTGTAT CAGCAGCTGC TCATGCAGCA GCAGACTGGA
CAGTTGCCTA GACTCGATCC CGACCAATTG CATCAGCTCA CTCAAATAGA GGCTCAACGC
GCTCGCTTCT CTCTGAACAC GAACGTAGCT CCTCCCAAGT ATGAACCTGG CGAGTTCTCA
CCGACATCTA TGGCATTCTA TCAATCGATG GGGCTATATC CTCATGCAAC TCCTGAAATG
TCCGGTACTG TATCAGCCCC ATGGTCACAG ACTGCATTCG GTCAGGTTCC TGGACCGGGC
CTGGTTGGTC ACCCCGCGAC AGCAGGACCC GCACAGCAAC ATTTCCTTAC TCCCACTCTG
TCTCATGCAA CCGTTCGCCG TCGCTCATTT GGCGGTGGGG AACACCCTGC TATGGGGGCA
GGAACACCTG GATACGGTAT GGAGTTTAGT TCGCCATTCA TGGGTAAATC GGTTGGTCAA
ATTAGGGGCG TGAATATGGG ACATAGGCGA GCTGCGAGGA GCGAAGATTT TGGAAGAGGT
GGTACAGGGT GGGGAGTGGG AGCTGGTGGC TCAACGTGAG TATCTTTCCT TCGTTGTGTA
CCTTGATTCC AATCAGTTCC TGGAAATTGC CACAAAGCGA TTTCAGGGGA GTAGATCGTG
TATCTTGCTT TATCTTGAAA AGGGCTGTGC TGAGGCTGTG TAATCTTTAT CTTTTTGTTC
ACATAGCGCC GAGTTCTTGC AAAGTATTAC AGGCGACGAT GGTTCATTGC TTCCCCCCTC
CAATCGAGGT CATGCAATGT CCCACTCTCG GCATTCATCA ACATCTTCAA TACGCTCCGC
ATCACCCGCT TTATCTATAT CTTCTCAAGG CTCATCCTTC TCTCACCATT CACCACGCAT
GGACATGCCA GACAGTATGT ACCCTGGTCA TCCAATCATC GCACCAGCTA CGCCACTTCA
AGTTTCTGGA CTGTATGAAG AGCAGCAGGC GCCAGCGAGA GTGGCAAAGA TGAAGGTCAC
CAGTGTAGCG ACAGAGGTGG CCAGCACGAG TCGAAGGACG AATAGTGGGA TCTTCAAATG
TCCGGGTGAG TCACCCTGTT CCATGATTGG GCCTTTTTCT GTCGTAAAAA GATAAGCGCT
GATGTCACGG AACCAGTGCC TGGATGCGGA AGTACGTTTA CAAGGCATTT TAATCTCAAG
GGACATCTGA GATCGCACAA CGATGAACGG CCGTTTAAGT GTCTTTACGA AGGTTGCCCC
AAAGGTATAT TTTGTTGGTC TTTCGTGTAC AATTTCTCAT TAACAGCATC TTGTCTAGCT
ATCGTCGGTT TCGCCAGACA ACATGATTGT AAACGACACA TGCTTCTGCA TGAGGGTTTG
CGACTATTTG AATGTGAAGG ATGTGGAAAG AAGTTTGCTC GTCTTGACGC TTTGACCCGA
CATCGTGAGC CGACTCAAGC CAAAAAGGGA TGCGAGTGTG CTGACGTTCC TCAGATAAAT
CTGAACAAGG TCAAGAATGT GCTATCACAC ACCCATTACC TACCAATTTT GATGGCTCAC
CTATGTCTGA GTCTCAATAC AAGACGTACA AGGGCATCAA GTCTACTCCC GAAGGTAGCG
GCAGACGGCA AAGCTCAACA GCAAGTGGTA GTGGCAGTGG GAGCGGCAAA AAGCGGTCGA
AGAAGAGTGA AACGAGTGAA GAGGATTAAT CGCCCGAGAG TCATAGCGCG CTGTGGATTG
AGAATAAAAT TGGACATTTC CTTTCTTGCC ATTCGTATGG TCGCCAGGAT ACAAGACGTT
GTGATCTTTA GCTTTTGTTT ATCTAGATTT ACTGTACCAA TAACAAGACT CTATGTACCA
AAAAGCTGCT TTTTGATTAG AACGAATCGA CGTTCTTTTT TGGCGTC
|
|---|
| Protein sequence | MADPASPPSF DAIFAQQPVR RSSSTSTSSF ANYTYSALQQ HQQFNSDAPL VDEPQSLSEQ
TRKQQRDPSK DSSNKRYLDM MSGLADGYGV INGRRQESLR KESLPFNPQE DSTLIATAPK
RGERNGLGRN GYSSPIGDIM FGPEQIIRNQ PQRPSQQPSW GEGRISEQSV HYASVQQPQY
SSFQSSGPGA GSTGMDYLPP GTASSMNDTM LSNQVSPYLS HDAASEGRPQ QQQQQQQGEW
GQEFIGVEQQ QQYAQGEGQS NGMEDMLTMG DESPFENELQ RVISNTSHPS QYPSRTTSPF
PQQSQSNIVP TSTGNHVRTE SFPASRSPSP FPPQQASQTE APNHVVSPPS MGQPTYPRAS
SSPRTNPNSP FFNKPQSPPA LIIPNSPVLP SIVTQSTSNN HSKGLNQSHT RHANNGAGGL
FPPSNPALEH LTGMAGISPI APNADGPMIC IQPSTPISGL KEGRGLFDAA LRRAGGAQRQ
GPQGQGESQQ DQQQDGFNVP PPQSHPLPRT SSSDQINQDV EMQGMDFAAQ MQSYEQQGWA
SDTLRIAGPS RPRAKSDSII PSPTADSFDR QAFLAFIGAG NAQPPPSNVE MQPGYVDVSE
QWRNTVSAWK AGLGGGELSS QPTLDPRLLP GRESNEAVYQ QLLMQQQTGQ LPRLDPDQLH
QLTQIEAQRA RFSLNTNVAP PKYEPGEFSP TSMAFYQSMG LYPHATPEMS GTVSAPWSQT
AFGQVPGPGL VGHPATAGPA QQHFLTPTLS HATVRRRSFG GGEHPAMGAG TPGYGMEFSS
PFMGKSVGQI RGVNMGHRRA ARSEDFGRGG TGWGVGAGGS TAEFLQSITG DDGSLLPPSN
RGHAMSHSRH SSTSSIRSAS PALSISSQGS SFSHHSPRMD MPDSMYPGHP IIAPATPLQV
SGLYEEQQAP ARVAKMKVTS VATEVASTSR RTNSGIFKCP VPGCGSTFTR HFNLKGHLRS
HNDERPFKCL YEGCPKAIVG FARQHDCKRH MLLHEGLRLF ECEGCGKKFA RLDALTRHHK
SEQGQECAIT HPLPTNFDGS PMSESQYKTY KGIKSTPEGS GRRQSSTASG SGSGSGKKRS
KKSETSEED
|
|---|
| |