| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA01330 |
|---|
| Symbol | |
|---|
| ID | 3253698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 355988 |
|---|
| End bp | 357520 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638252465 |
|---|
| Product | actin ii (centractin-like protein), putative |
|---|
| Protein accession | XP_566591 |
|---|
| Protein GI | 58258357 |
|---|
| COG category | [Z] Cytoskeleton |
|---|
| COG ID | [COG5277] Actin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGAGTATACA GGGACCCGGA CACAGAACTG GCAGGATGGC CACAGAATTC GATGATGTGT
AGGTGCAGCA TATAATTTGC ATAGTCACCG AGCTGACAAC CGTCTCAGTC TCACAAATCA
ACCAGTTGTC ATTGACAATG TAAGCTACAG CACACAAGGA AATGACATCT TAATGACATG
TCGTAGGGTT CCGGCAATAT CAAAGCTGGT TTCGCTGGAG AGGAGCAACC ATCGTGTTAT
ATTCCTTCAT TGTAGGCTAG AGGCACATGC TCACTAACGT TAATCAGCTG ACATTGCTTA
GTGTGGGTCG ACCAAAACAC CCTCGTGTGA TGGCAGGAGC TATTCAGGAC AACCTTTTCA
TCGGTCGACG AGCACAAGAG TTCAGGGGAT TGTTAAAGAT CAAATACCCA ATGGAGCATG
GTGTGGTAAT GGACTGGGAT GATATGGAAC GGATATGGGG CTGGGTCTAT GGTGAAGGAT
TAAAAGCGTT AAGTGAAGAA GTGTGTCAGT TATGTTCTTC TCAGATGTCC AACTAAAAGA
TTAATTAGCA CCCTGTGTTA CTTACTGAAG CACCGCTCAA CCCTAGACAA AACCGAGATA
TAGCCGCCCA AATCTTTTTC GAAACTTTCA ACGTCCCGGC CTTTTTCACC TCTGTCCAAG
CCGTTCTCTC TCTTTACTCT TCTGGCCGCA CGACCGGTAT CGTCCTCGAT TCTGGCGATG
GTGTCACCCA TGCCGTTCCC GTGTTCGAAG GTTTCTCTAT GCCCCATGCT GTTAGGCGTA
TAGACCTTGC CGGGCGAGAC ATAACAGACC ACCTTCAATT GTTGTTACGG AAAGCAGGGC
ATAACCTTCA CACATCTGCG GAAAAGGAAG TGGTGAGGAC GATCAAGGAG AAGACTTGTT
ACTTAGCATT GAATCCAGCG AAAGTGGAGA AAGATCAGGG CGGGGCATGG GAAGAATTCA
AATTGCCCGA TGGAAAGGTG ATACAGCTAG GGACGGAACG ATTCCTTGCA CCCGAAATCT
TGTTCAACCC CGAGCTGGTG GGGCAAGAGT ATCCAGGTGT CCACCAAGTG AGTGGGTTCT
GCCCTGATCG AAAGCACTAT CTAAATAATT TAAATAATTT TCTAGGTAAT CGTTGACTCT
ATCAATCGAA CCGACCTCGA CCTTCGAAAA TCTCTTTTCA GCAACATTGT CCTTTCCGGC
GGTTCCACGT TGTGTACTGG TTTCGGTGAC CGATTACTAA ATGAAGTCAA GAAACTTGCT
GTGAAAGATG TTAAGCTAAA GATTTATGCT CCTCCAGAAC GAAAGGTCTG TGATTGACAT
TTATTATTGA ATTTTGCTGA CGATATCGTA GTACTCGACC TGGATAGGAG GAAGTATCCT
TGCCGGTCTC AGTACATTCA AGAAGATGTG GGTATCGGCG GATGAATACA AAGAAGACCC
GGATATCATC CACAAGAAGG CATTTTAATG TTTCATTACG GGGACGAGGG ATATCCTAGG
TGTCATACCA GTCATGTATT ATACCTTTGC ACA
|
|---|
| Protein sequence | MATEFDDVLT NQPVVIDNGS GNIKAGFAGE EQPSCYIPSF VGRPKHPRVM AGAIQDNLFI
GRRAQEFRGL LKIKYPMEHG VVMDWDDMER IWGWVYGEGL KALSEEHPVL LTEAPLNPRQ
NRDIAAQIFF ETFNVPAFFT SVQAVLSLYS SGRTTGIVLD SGDGVTHAVP VFEGFSMPHA
VRRIDLAGRD ITDHLQLLLR KAGHNLHTSA EKEVVRTIKE KTCYLALNPA KVEKDQGGAW
EEFKLPDGKV IQLGTERFLA PEILFNPELV GQEYPGVHQV IVDSINRTDL DLRKSLFSNI
VLSGGSTLCT GFGDRLLNEV KKLAVKDVKL KIYAPPERKY STWIGGSILA GLSTFKKMWV
SADEYKEDPD IIHKKAF
|
|---|
| |