| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA01160 |
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| Symbol | |
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| ID | 3253807 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 313266 |
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| End bp | 314665 |
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| Gene Length | 1400 bp |
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| Protein Length | 293 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638252447 |
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| Product | LSDR, putative |
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| Protein accession | XP_566558 |
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| Protein GI | 58258291 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGTC TTCGAAGTTT GACACTTTGC TTTCACCAAC AAACATCATT CATCATGTCC
TACTTACAAG ACCTCTTTGG CCTTACAGGA AAAACTGCTT TGTAAGTAGC TTTAAGGCAA
GGCTCTGCAA AGACCTCCTT GCTGACGACC ATCTCAGGAT CACTGGCGCC ACCCGGGGTA
TTGGGGCTCG AATGGCCCTT GCTCTCGCCA AAGCCGGTGC CGACATCATC CTTGTCCAGC
GTAACACCAG CAACACCGCG ACCCGAGACG ATATTATTGC TGCGGGGGGC AAGGCTGACA
TTGTTGTTTG CGACCTCGGT GATGCAGCCT CTGTTGCCAA GCTCATTCCC CACGTTACCA
AGGAGCTCGG ACGAACTCTT GACATTGTCG TCAACTGTGG GGGTATCCAG CGTCGACACC
CCGTTGAGAA CTTCCCTGAG AATGATTGGA ACGACGTTCT CCAGGTCAAC TTGAACACTG
TCTTCACTAT CACTCGAGAT GCTGGTAGGC ACATGCTCGA ATCTCGAGGT GGTGTCGCTG
GTGAGCCCGT CCCCGAAGGC GGCGCTGCTG GCAACCCCAG AGGCTTCGGC AAGATCATCA
ACATCTCCAG CTTAGTGGCC TACCAGGGTG GTTTGAACGT TGTGGCTTAC GCCGCTGCCA
AGCACGGTGT CCAAGGCATT GTGAGTAGTT CGGTGTCCCG ATAGTTGGCG GTAATCAGTT
AGGCTTTGCT AACCAAGCTA TACAGGTCAA GTCCTTCTCT AACGGTTGGG CTTCTAAAGG
CGTCTGTGTC AATGCCATTG CCCCCGGTTA CATCGCTACC GACGTGAGCT TCCCGCCTAC
TTTATCGCTC AAGTCACCAG CTGACATGTG GCCAATTTGC AGATGAACGA AGCTCTCATA
GCAGACAAGG ACCGAGCTCG TCAAATCCTC GAACGTATTC CTGCCGGCCG ATGGGGATCT
CCTGAAGACT TTGAGGGTGC CATTGTCTTC CTTGCTTCTC GAGCGAGTGA CTACGTCACC
GGTGAATGTC TGGTTGTTGA CGGCGGATGG ATGGCTCGTG AGTGTGTTTA ATGTTCTCGT
ATGATCGGCG CTGACCAAGG ATATGACCCA CACCAGGTTA AACAAGACAG GACATGTGTT
GTATCTGCTA TATAGAAGGT TTTCATGCAA AGCCGTGCAT ACATCAATCA CCCATCATTC
ATTCTGTTGC CATGTTGTAA TTTAGACATC ATGAATCTGA CACCCTAAGG ACATTCCCTC
TGCAGACCAG TGAAACTAGC CTTTCAACGT GCATCAATGA ACGTCGTATG ATGGTGACAA
TTCATACCAA AACTCGACGA AATGCTACAA ACAATACTAT AACAAAACTA CGAGTACGAT
ACTATATGCA ATAATGATTA
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| Protein sequence | MKCLRSLTLC FHQQTSFIMS YLQDLFGLTG KTALITGATR GIGARMALAL AKAGADIILV
QRNTSNTATR DDIIAAGGKA DIVVCDLGDA ASVAKLIPHV TKELGRTLDI VVNCGGIQRR
HPVENFPEND WNDVLQVNLN TVFTITRDAG RHMLESRGGV AGEPVPEGGA AGNPRGFGKI
INISSLVAYQ GGLNVVAYAA AKHGVQGIVK SFSNGWASKG VCVNAIAPGY IATDMNEALI
ADKDRARQIL ERIPAGRWGS PEDFEGAIVF LASRASDYVT GECLVVDGGW MAR
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