Gene CNA00970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00970 
Symbol 
ID3253866 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp268830 
End bp273121 
Gene Length4292 bp 
Protein Length1211 aa 
Translation table 
GC content50% 
IMG OID638252429 
Producttwo-component sensor molecule, putative 
Protein accessionXP_566525 
Protein GI58258225 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAAACACTT TCCTCAAATC TTACACCAAT TGCCCAGCAT GCCAGCAGAA GATGTTGACA 
ATGCTACACT CGCGCCTGCC ACGCCGCTTG CCATTGCCAT GCAATCGAAC GATCAAATAA
AAGCAAACAC CAAGGCCAAC TCTAAATCCA GAACACGTTT CGCCCCTTCT CGTCTCTCGT
CGGTGTGGCG TTCACTTGTG TCCCACCTTA CTCCGCCCTC GCATCCGTCC ACAACATCTG
AGTCCGCTTT GGGTTCATCG CTAAGGAACA CGACGGATAA CATGTACTAT GAAGATGGGT
CGGCGGTACG ACACTTGCCG TTGGAGCTGT TGAATCCCAA GGTTGGCACA GATAGTAGAC
ACAAACGGAA AGGTGTTTCA GACACAAAAA ACAGTGGTTC AAGGGGTGGA TTGAGGCACA
GATTGCGCGG AAGTCAGGCG AATAGTAACT CGAGGTACGG TGACGACGAT GATATGTCCG
CCAAGCCGAG CGAACCTGTG TCGAGGATTG TCGTCGACAA TAATTTCGAA CACTTTACGC
CTGCAGTTCC TAGGAGTGAT TCAGGCTATG GCTCAGGTCG GACACCTGCG ACGAATGGCA
CGCCTGGAGG TGGCGAAATT GGAGACGACG AAGACGAAGA AGGGACAAGA GGCCAGAGAA
GTGATGGAGC GAGTACGACG CAGAGACGGA GTAGTGCAGC TGCACAGTGG ATACAGAAGA
ATGTGGTGGT AGAATGGGTC ACTGATAGGC TTTGGCCCAA CGTCAAGCAT TTCTTGGATT
CGAGTTATCC TGAACCCAGT AAAGAGCATT CTTTCCAGAA GGAGGTCCGT ACACATTTCA
TTTTAACAAC TGCTTTGAAA GCTAACCCTT CTTAAAGCTT TGGTTCACTC AAAAGCAAGG
TGCTCTTGCT TCTTCTTTGT TTTTCCTTAT CAACTACGCC CTCACCGTCG GCCTTTTGCC
CAGGCCCTTC TCAAACTTTG ACTGGATTGC ATACCTCGGT ATTGGCGGTG TCTTCACTCT
CCCCATCCTT CCTCTTATCG TTCTTGACTG GCCTCGTCGT CATCCCCGGA TATGGCAGCC
TATCATATTC CTCGCTTGCT GGGTATTTGC CTACATCCTC ATCGTAGAGA TGCACCTCTG
CGGCTTCTTC ACCGATAACA ATCAATGTGG ATCGAGGAAT TTCCTAAATC TGTTAGGTTT
CGCCTTTGGT CAACCGACCT TGGCGCTTTT GACCATGAAG GAAGACAGAG GGATGGCGGT
GGCTGGAGCA TCGATTTGGA TCATTTTGAC GGGTGGTTTG ACGATGACTC AGAAGAACTC
GCCAACCCTG TTTTACAGGA ATATCGTCTT TTGTGGGTTT ACTCTCTTTT TAAAACAGAA
ATGACGTGGT AACTGATGAG AGTAGTTGCT TTGTTCCACG CTTTCCTCAT TGGAGCGAGT
TTCCTCAAGG AAAGAAGGTG TGCATTTAGT TTATCAAAGG GAAGGATATC GAGAAACTGA
CCGGGAAAAC AGTGACCGAC AAATGTTTGC TCTTCGACAA CAGCTCAAAA TCCAGTACCG
AGCAACACAA TCTGCTCAGG TCATGGAACG TCGAGCTGCC GATTCCAAAA AACGATTCGT
CTCTTACAGT ACGTTCATCC CTTTTTCCCC ATTCCACGCA CGTGCCAACT CGTCTTTTCC
CATATAGTCT TCCACGAAGT CCGAGTTCCG CTCAACACCG CTCTCTTGGC CGTCCAAAAT
CTTCAAGGCG AAAGGGTCTT TGAAAACGTC CAGCAAGATC AGGCTGAGAT GGTTGATGGC
TTGATTAGCA GTTTGTCGAT GATGGAAAAG GTTTTGAATG ATGTTTTGAG CTTCAACAGA
ATGGAAAGTG GAAAGGTCAG TCGTTGCCGC TGAGTTATCC GTGGATAAAT TGGGCTGACG
AGAAGAGCAC AGTTTGCTCA AGCGAGAAAA CCATTTGACT TTCACAAATC CATTCAGCTG
GTTGCACTTT CGCACCGCAC CCAGGCTCAG ATGGCTGGTA TATCTCTCGA GGTAGAGTTG
GATTCAGATA TTGATAAAAT CGGCGGGATC TTCGTTGGTG ATGAGATGCG TCTCAGACAA
GTGGCTAGGT ACGTTTAAGC TCGTTTGTCA AACAATTGTA CAGTAGGCTG ACACACCGTA
TAGTAACCTT GTATCGAACA GTATCAAATT CACTGATCAA GGTTCCGTCC GAATTGTGAC
CAAGCTTCTC TATCCTCGTT TGGAACCCAC TCCCGCGACT GAGCCGGACG ATCCTTTGCG
TCAAGCTGCT ATCAACCTGC AACGGCAGCA GGAGATTGAA GAAAGTGAAA AAGCACGTTC
CGGAACGCCT ACCCGTTCTT TCCCTGCAAA CCCCCACTCA CTCCCTTCTC ATCCGCGATC
CCGTCCTGAT TCGGCCAAAG GGACGCATGG GCATACTCTT ATGGATCTGG AGAAGGGATC
AGTGACTATG GAGCAGAAGA GGATGAGTAG AGAGTCGGGG AGGGATAAAG AGAAGGAAGA
GGAAAAGAAG AAGGTGCAGA AGGCTGTGGT CAGGGTGGAG ATACATGACA CGGGTGTGGG
TTTGAAAAAG ACTGATGTTA TGGAGTATGT GATGTTTTCT TTGGGTATTA TGAACTTTTA
CTGACTTGTT ACTAAATCAG TGGCGATCTC TTTTCACCCT ATGTCCAAAC CGAAATCGGT
CGTCGACAGG GTGGTAAAGG CTCCGGCCTC GGTCTCGCCC TCGTCCGACA AATCGTCAAG
CTCTCCGGCG GTCGACTGGG TGTGGAGAGT GAATTCGGCA AGGGAAGTAT GTTCTGGTTT
GAGTTACCTT ACTCTTTGCC TCCTCCGCCC AAGGCGAGGC CGGGAAGTAG CAAAGGTGAT
AGGATGGGCG GTATCGGTAT CGGTGGCGGC GCCCCTGGAG TTTCCCATCC CGTGGCGAGC
GGGAGCGGTG GAAAGCCGGC TTTTGGATTA GTTATGCCTT TATCCTCCTC GTCGAACTCA
ACTTTTGTTC CTTTGAGCTT AAATACTGGC ATCCCACATG GTCCTAACCT GGGCGTGATG
GGCACTGATG CGGCGTCGGC CGGGGAGGGG GTTGGTGGGG ATGACGAAAG AGGACCGCCA
AAGAGGCCTG GTACGATGGT ACGCATCATG TCTGGCGCGA CAATGATGAG TTCGACTATG
GAGAAGGGAA CCAGTCCAAC AAGCGCCAAC TCTGAACGTC CCGCGATCGG GACGACAGAT
AGTACAATGC CTCTTTTACC TGTCGAACCA AGAAGTATGT CTTTGCCATA ACCCATTCCA
TAAGAGATAG AAAAGCTGAT GATCATTGCA GTGTCTGCAG AGGAAGCCAT CACGGCAGGT
GGCGTCCCTC AGTCACCTTC CACCTCCTCA CACTCAACGA CACAAGAACC ATTCATTGAC
CCCTTCTCAC CTATTAGCTA CACAACCCTT CGCGAACGAC GTAGTTCCGA ATGGAGCGAA
GAAATGGGTA GAGCAGCGGC TTCAGTGGAA AAGCTTGAGA GTGAGCGTGC TGTGACTGGT
ATGGGGCTTG GTATGGGGGT CGGTCAGGCA GCGGAGATCA AGTTGAAGAC TAGGGGAATG
CAAGAGCAGC CGGAGACGAA GGAGGACCCA CCCGCGGAAA TGCCATTATC GAGTTTGGTG
GTGGACGATG ACAAGTGAGT TTTTTTTTTG GTTGCGTCGG TAATTCAAGA ACAGCAAAGC
TAATGACATT ATGTAGACTC ACACGTATGC TCATGTCGCG AATGTTGACT CGTTTGGGAC
ATCATGTCAC TACAGCCGAA AATGGCAAAA TCGCTTCGGA AATGATCAAA GACATGTTTG
AGAATAAAGA GGGCGCAATC AAGTTTGATA TCGTCTTTTT GGACAAGTGA GTATTATCGT
CCTCGTCGCC TTCCAAAAAG TAAAAGCTAA TGCCAATGAA TCAGTCAAAT GCCTCTCATG
TCGGGTGTGG AAGTGGCGAG AGCTGTCCGA GAGATGAATT GCCCAATCTA TATCGTCGGA
TGCACGGGTA ACGCTTTGCG CGAGGATCAG GTATGCCTTC AATGTTCTAC TGCCAGTAGT
GCCCACGCTT ATTGTCTTGA TAGGACGAGT ATATGGCTGC GGGAGCAGAT ACTATCCTTA
CCAAACCTAT TCACCAGAAA CATCTCATCG AAATGATTCG TGATGCCCGT CGCCGAGTTG
CGGGGGAAAC GCAACCGAGA TATATGGACT ACGCCGACGA ATCCCCCATG AGCCCCGTGC
ATATGAGGGA TCCTCTCCCA AGAATGTCTT AG
 
Protein sequence
MPAEDVDNAT LAPATPLAIA MQSNDQIKAN TKANSKSRTR FAPSRLSSVW RSLVSHLTPP 
SHPSTTSESA LGSSLRNTTD NMYYEDGSAV RHLPLELLNP KVGTDSRHKR KGVSDTKNSG
SRGGLRHRLR GSQANSNSRY GDDDDMSAKP SEPVSRIVVD NNFEHFTPAV PRSDSGYGSG
RTPATNGTPG GGEIGDDEDE EGTRGQRSDG ASTTQRRSSA AAQWIQKNVV VEWVTDRLWP
NVKHFLDSSY PEPSKEHSFQ KELWFTQKQG ALASSLFFLI NYALTVGLLP RPFSNFDWIA
YLGIGGVFTL PILPLIVLDW PRRHPRIWQP IIFLACWVFA YILIVEMHLC GFFTDNNQCG
SRNFLNLLGF AFGQPTLALL TMKEDRGMAV AGASIWIILT GGLTMTQKNS PTLFYRNIVF
FALFHAFLIG ASFLKERSDR QMFALRQQLK IQYRATQSAQ VMERRAADSK KRFVSYIFHE
VRVPLNTALL AVQNLQGERV FENVQQDQAE MVDGLISSLS MMEKVLNDVL SFNRMESGKF
AQARKPFDFH KSIQLVALSH RTQAQMAGIS LEVELDSDID KIGGIFVGDE MRLRQVASNL
VSNSIKFTDQ GSVRIVTKLL YPRLEPTPAT EPDDPLRQAA INLQRQQEIE ESEKARSGTP
TRSFPANPHS LPSHPRSRPD SAKGTHGHTL MDLEKGSVTM EQKRMSRESG RDKEKEEEKK
KVQKAVVRVE IHDTGVGLKK TDVMDGDLFS PYVQTEIGRR QGGKGSGLGL ALVRQIVKLS
GGRLGVESEF GKGSMFWFEL PYSLPPPPKA RPGSSKGDRM GGIGIGGGAP GVSHPVASGS
GGKPAFGLVM PLSSSSNSTF VPLSLNTGIP HGPNLGVMGT DAASAGEGVG GDDERGPPKR
PGTMVRIMSG ATMMSSTMEK GTSPTSANSE RPAIGTTDST MPLLPVEPRM SAEEAITAGG
VPQSPSTSSH STTQEPFIDP FSPISYTTLR ERRSSEWSEE MGRAAASVEK LESERAVTGM
GLGMGVGQAA EIKLKTRGMQ EQPETKEDPP AEMPLSSLVV DDDKLTRMLM SRMLTRLGHH
VTTAENGKIA SEMIKDMFEN KEGAIKFDIV FLDNQMPLMS GVEVARAVRE MNCPIYIVGC
TGNALREDQD EYMAAGADTI LTKPIHQKHL IEMIRDARRR VAGETQPRYM DYADESPMSP
VHMRDPLPRM S