| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00870 |
|---|
| Symbol | |
|---|
| ID | 3253881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 244911 |
|---|
| End bp | 246723 |
|---|
| Gene Length | 1813 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638252419 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_566514 |
|---|
| Protein GI | 58258203 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0378248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTTTCACTT TATTCTCTAC CATCAATCCA TTTCGAGCAT GCCCCATAGA CCAAGTCCCA
AGCCTCCATC GTCATTGCCG TCCCCTTCAC GGCCACAAGA ATCACAAATA GAGGTACTCT
ACAACACGGC CGTTCAATCC TTTGTTAGGC GGGACCATGT CAAGACCCAA GCAACGCTCG
CACGGCTGCT CGAGTCTTTA AAAAAGAAGA GGATTGGACC TTATAGAACA TGGTACAAAC
TGGATGGGGC TAAACCTGAC AATGAGAATT CGGAAGCAGC TGCGAATGAC GACTGGATGG
TCAAAACACT CAAGCTGCTC ATCAGTTCAA CGGCTTCGCT ATACGCTGAT CCTCCTAACA
ATACCACAGC TCTTCCTGAG CTCCTGGTCT CTATGTTGCC CCCTAAATCC CCAAAAGAGA
TTTTATCGTA TCTCCAACAT CGTTGTATGA GCGCGTATTA CTCCAAAGGA GCGACAGCAC
ATCTTCTACC TCCCCAATTG GTATCCACTC TTATCCTGGC GTCTCTCAAG CTTTCACCAC
AAAGATCTGC ATTGGACTTT GCCCATTCAA TGACAGAGTC ATGGATAGCG TCTTTACCAG
ACTCTTTGAT ACTCTCCATT AGCCCTACAA GCTCTTACCG GCCTAAAGAC CCAATCGAAC
GCAAGCGGGT CGAGAGTGCG CGGGAAGGAT ATTTGAAAGT TGTAGAGCTT TTTATCGGCG
AAGTTTTGAG TCGTGAAGAG GAATGGGAGA TGGCAAGGGG ATTCTTGGAG GGTGAAGTTG
TTATGTCTTC AAAGAAGAAA GAGGTGCGTA CTATCATTCC TATCCCCTTC TCTGTCCATA
CACAGACTAA TATCGAATTT AAAAGACACT GTACAAACAT CTTAGAACAC TTGAATCCAA
GGCTTCCCTC CCCTCTCTAG CCCCATCCCC TTCCTCATCC CTCATTCTCC CTTCTTCCTC
CGATTCCTTA TCCATTGAAG AGGAAAAAGA AAGTAAGATA CGCTCCCGAT TATCAAGGTC
ATCAAGCACA TCATCATCCA GCTCAAGCTC GAGCGAAGCT ACCGCTCGTC CCGGTACTTC
CCAGAATGGC GGTCTCCTGG GTACAGGTCT CGCTCTAGGC CAAAGAATGG AGCAGCTGAG
ACAGATACGA AAGGCTGGTA AGGATAGGGG AGAGGAATCA CCGCGTCCTG GTTCTATTGC
GAGTCAAGCA TCAGGGTCTG GTATCTCTGA AAGCACTTAT CGCCTTGTCC ATTCGAATTT
TAGACGCAAT TCATCTTCCC GGCGAGGAAA TGATGTCCCA ACCTCCAGAC CAGATAATTT
GCACCATATC CTTCAATCTT TGCTCGGTCG CCTACCTACA TCCCTATCAA CCACTCTCCA
ATCCCTCTCC CCCGTCGTTC TGACGGTCAT CACTATACCG TTGCCTTTAC TTATCATTTT
TACCATTATC CGACTCCGTC GATCGAGATT CGCGCGCCAG CAGACGACAG TAGTAGGAGG
AGCGAGAGGG GGCTCGCGCA ATACGGTATT ACAAGTCCAA CATCGACTGC AAAGGGTTAG
AACTCAGCAG AGAGGATGGT GGGATTGGGT ATTGTGGTAT TTGAGATGGT GGTTAGCCAA
ATTTGCGGGT GTTTGGAAGC TGGGTACGAC GATCACGTAT GTTTGATCAA GAGTCTATCA
GGGTTTTGGC GGGGGAACGC ATTGTTTTTT GCACCGGATC GCAACTTTGA CAGCGTATGG
CTCTTGTAGC AAGTTGTATT GATGCATTAT CGAGTAAAAG ATATAAAACA AGCAACAATC
AGGTGATTAA TGT
|
|---|
| Protein sequence | MPHRPSPKPP SSLPSPSRPQ ESQIEVLYNT AVQSFVRRDH VKTQATLARL LESLKKKRIG
PYRTWYKLDG AKPDNENSEA AANDDWMVKT LKLLISSTAS LYADPPNNTT ALPELLVSML
PPKSPKEILS YLQHRCMSAY YSKGATAHLL PPQLVSTLIL ASLKLSPQRS ALDFAHSMTE
SWIASLPDSL ILSISPTSSY RPKDPIERKR VESAREGYLK VVELFIGEVL SREEEWEMAR
GFLEGEVVMS SKKKETLYKH LRTLESKASL PSLAPSPSSS LILPSSSDSL SIEEEKESKI
RSRLSRSSST SSSSSSSSEA TARPGTSQNG GLLGTGLALG QRMEQLRQIR KAGKDRGEES
PRPGSIASQA SGSGISESTY RLVHSNFRRN SSSRRGNDVP TSRPDNLHHI LQSLLGRLPT
SLSTTLQSLS PVVLTVITIP LPLLIIFTII RLRRSRFARQ QTTVVGGARG GSRNTVLQVQ
HRLQRVRTQQ RGWWDWVLWY LRWWLAKFAG VWKLGTTITY V
|
|---|
| |