| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00790 |
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| Symbol | |
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| ID | 3253462 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 227301 |
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| End bp | 228587 |
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| Gene Length | 1287 bp |
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| Protein Length | 331 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638252412 |
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| Product | exosome complex exonuclease rrp4, putative |
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| Protein accession | XP_566505 |
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| Protein GI | 58258185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1097] RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.937014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGCG TAAAAGCAGT AGCGCCGTCC ATTAGTCAAG CGTTCACTGA AATTGTGCCG
TCAACACATC GCAAGCACCA AGCGGAACTC GATGCGATGG ATCTCGACGA AGATGAGTTT
GGTGGCGCTG GACCTAGCAA AAGGTCTATT GTTAGCCCCG GAGAGGTTAT TACCAGCTCC
AAGGAGTATA TGAGGTAAGA GATGTCCAAT GACCATTAAG GATCGTATTA AGCTATTTTT
CAGAGGCCAT GGAACTTATG TCGAGGAGAG CAATGTCGTG TCCTCTGTCG CCGGTACGAT
TGAGAGAGTA AATAAACTCA TTTCCGTCAG GCCACTTCGT TCAAGGTGGG TACATCCTTG
TGAACATCCA TATGGAAAGG ATGGCCTTGT GTCGTGCTAA CATTTTGACT TCGAAAATTC
AGATATACTC CAGAAGTTGG AGATCTCGTT ATCGGTCGAA TAGTAGAAGT GGGAGCGCAG
CGATGGCGTG TAGATGCCAA CGGGCGTCAA GATGCTGTTC TGATGCTCTC AAGTGTCAAC
TTACCGGGCG GTGTGCAAAG GAGGAAGATT GAGTCAGACG CTTTGAAGAT GAGAGAGTTT
TTGGCGGAAG GAGATGTGAG CTTCTCAGCT ATGGCCACTG ATTTGTATGC TGTTACAGGA
CTGACCGAGA AATAGTTGCT TGTTGCTGAA GTTCAAGCAT TCTTTGGAGA TGGAGCCATG
TCATTACATA CGCGATCATT GAAGTACGGC AAAGTAAGTA TTTGTACGAT ATTCCAATAA
ATGTACACTT ACACCGCTCT TGGCAGCTTC GTAACGGCTT TCTCTTGACC GTCCCTCCAC
AGTTAATCCG TCGACTTAAA TCCCATTTCT ATCACATCCC TCCTCCTTGT GGCCCTACAG
GTGTCGACGT TATCCTCGGG TTGAACGGTT ACGTGTGGGT GAGCAATGGA ACGTCACAGG
CGCGACGGGA GGGTGGTGAA GGGTTTGACT CAGAAGGTGT TTACAGTAAC CAAAATGACG
TGAGTCGCAT AGTATCCCAG TCAGGATTGA CTCTGACGGA TACACTCGCA GGAAATCCCT
CCGCAAGGCA GAGAAGCCAT CTCCCTCGTT GCTAACATCA TCAAGGCTCT TGCTAGCGAA
GGTGTTCCTC TTACTGAGAC TCTTATCGGC GAATCATACG CATGGGCGGA GAAAAATGTG
CCATCCGGGT CAGGACCGTT TGATTCGGAG ACTGAGAGAA AAATGCTTAA CGAGATTGTC
GGTTTGGAAT TTCTCGAATT TGCTTGA
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| Protein sequence | MFSVKAVAPS ISQAFTEIVP STHRKHQAEL DAMDLDEDEF GGAGPSKRSI VSPGEVITSS
KEYMRGHGTY VEESNVVSSV AGTIERVNKL ISVRPLRSRY TPEVGDLVIG RIVEVGAQRW
RVDANGRQDA VLMLSSVNLP GGVQRRKIES DALKMREFLA EGDLLVAEVQ AFFGDGAMSL
HTRSLKYGKL RNGFLLTVPP QLIRRLKSHF YHIPPPCGPT GVDVILGLNG YVWVSNGTSQ
ARREGGEGFD SEGVYSNQND EIPPQGREAI SLVANIIKAL ASEGVPLTET LIGESYAWAE
KNVPSGSGPF DSETERKMLN EIVGLEFLEF A
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