| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00570 |
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| Symbol | |
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| ID | 3253899 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 157905 |
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| End bp | 161984 |
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| Gene Length | 4080 bp |
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| Protein Length | 1247 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638252390 |
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| Product | membrane protein, putative |
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| Protein accession | XP_566484 |
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| Protein GI | 58258143 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.618048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTC GCACACTCTC CTGTTGCAGC GAGCGAGAAC CTTTTGAACG TCACTCAAGT
TTTTGCAACA CTAGTTCCAG GAAACGAGGC AACAGAGCTT GGCCTGACCG GTGATGGACA
TGATGTCCTC AGACTCGACC TCGTGGGCGT CACTGGAGCC GAGCTTGCGG GCTATGACAA
CTCGACGAAC AAGCTTGCGA CGTTGTTCAC CGATACTCAC GCTGCAACGG CCAGGGTATA
CTCTTCAACC ACTTGGTTGT GCAATTCCCT TTTCCCAGCC GCATTACCCG AACCTTACTA
TCCATACAAC ACAACGTACT GTCCCCTCCC TGCAGGCGAC TTTGCTATCA ACATCTCCAT
CCCACTCTAC CGTTCTTATG CTCTTACCAC ACTACACACG CAAGTTCGTA TCGTAGACAC
TTCTTTAGAA GCGGCCAGTC TTACATGTCT CAATATTCAT GTCTCGCCAT ACGACGATTC
TGGATGGTAT TATCTTCTAT TTCGCTACTG GCTTGTCGCG CTTGTTGCTG GCTTCTGGCT
TGTCAGTTGG GGAGCCAGAT TTGTCACTGG TTGGATTGTG GGCAGTGGTG TAGCAGAATA
TGGACAGAAG GAACTCGCAG GCGCCAGGTT GATGGCTGGA GGATCTAACA ACAGGGAGGC
GACGATGCGC AAGTGGGGTA CGATGATTAT CAGTGGTCTG AGTGGAGAGA GATTAAGCGT
CAGCGGTGGT CTTCTGAGAT TCGGTGAGTC GAACTGAGAA TTGTGCAAGG CTGACTCTGG
CAGTGACTCC CGGTGTCAAG GATATTTTGT TCCATATCCA GTACGCCTCA ATGCTGGGCA
TGATTGCCGT CAATTGGCCC GAATTTTCAT ACCCAATTTT TGCCCAAGGC GCCTGGGGCA
ATTTGGTGTG GAACACAACT CTTGTCCAAG GATCCAACCC TACCTCAAAG CGAGTCAGTA
TATATCCCGA CAACTATACC GTTCCCTCCC AGTTCAGCAC CCAGATGACA GACCCTCTAT
ATCCATTATA TCTGGATGCG GATGCCTTTG ACCCTGTCCT TGACCTTCAC AATTCCCCTG
ATGGCATGGA ATCTTTCGCG ACGGCGGTAG GCCTCAGACC ACAAGACCTC TTTGGTACCT
GTCTAGCCAT ATTCCTTTGC ATCACAGCCG CAGTCATCTT CCTCAGCTTA TTGCTCTGGT
TCCTCCACGG ATTATCAGAA TACATCCTAA CTAAGGAGCA CAAGCAAAAC AGCCCAGCGG
CAAAGCGCAC GACGTTGGGT TCTAGCCCAC GCGGTAGTTT GGGTGGAAAG GAAGCGCTTG
ATCCGCAAAC ATCATCTTCA GAAGGCCTTG GTGTCCTCCC TACGCAATCA GGCTTTTTCA
GCCACAAATC CTCATCTCCA TCTCTTCTTC GACGGATCTG GCTACGCTTC CGACCTAGAG
GCGAAGCTGG TGCTTTCCAT GCCGCTGCGC TGTACGGTAA CCTCATCCGA CTCATACTCG
TCTTTCACCT GCCCGTCACT ATTTTCTCCA TGTACCAGCT TTGCTTAGGG GGCCGGGCTA
GCATCGTTTC TAGGGTCTTT GCTGCCTTTT CATTCGCATT CATCTCGGTA CTTATACCAG
CATATATTCT CTACCGAGTG TATAACACAC CTACAGGCAA GCTGTACGAC GCAACCAGAA
CGCTTTTATC CATCGGTCCG ATGTACACCG TCTATGTTGA GAAGAAGCAG ATGTTCCGTG
TGTTCTCTTT GACTGCAAGC TTGATAGCTG GAATTGTTGT TGGTGCGGGG CAGAAAAGTG
GGATTGCGCA GACTATCATC CTCATCGTCG TGGAACTCGC TATGTTGATT ATTCCCGGTG
TGTGGTATCC ATGGGGAGAA GGTGCAAGTA TGGGTGCGCC GAATGCTTTC TTAACTGCAT
TGCGATTGGT GTCCGTGGTA TTGGCAATGC TTCTAAGTCG AACTGTGAGT AATGTCGCTC
TCACTTGCGA TCAAGCCTGA CGAATGACTT GGTAGATATC CATGCCCGGA ACAGCTGCCG
ATTGGATCAC CTATGCCATC CTCATCATCC AAGCAATCAT TTTTGTTTTC TTCCTCTTGA
TGCTCCTCAC TAAAATCATC GAAGGTTCTA TTCGTCTCTT CGGTGGTGTA CACTTTGATG
AATCAACCCA CCCTCTGGAC GGAGGTATCT TCGCCGCCAT CATGGACCTC GACTGTCTCA
ATCCTGTACG AGGAGGTAAA GCGGCAGAGA GGCGAAGACG GAAACGCGAT TCAAGGCAGC
TGCACAAGAA TGTCTATGCT GCGGGAACGT TGTCAACTCA GATGATGTTG GATAGACATT
CTCAGGGTGT CCCAAGACAA ACAGTGTCTG AAGGTTCCAC GCCGATGCTT TACCCTGTCG
GCTACCAGCC ACCTTTGGGA CCGCCCCCTG TTGACCGGAG AAGCTCGGAT GACAGATCAG
ATGAAAGACC CAGTGGGAGT GGTAATATCA TGGATGCTTG GAGACCCGTC TCTGGGCCAG
GCTACGTCCC GCCCGGAGCG TATGCTCCTA CTGTAACGTC ACCTACCTCT CCGCCTCCCG
GTTCTCTTTT TGACAACGTT CAATCTGGGC CTAGTCGCGG GTTCTCAGTC GTCCGTGGGG
GTCGATCCAA TTACCAGAAT CCTTATGACA TACAAAACCT TAATGCGGGG TCCGATACTT
CCACGCCCAT AATGACTATG CCTGTGCCTA CCATTCGCGT GTCCCAAGTA GGCCAGCGAC
CCATGTCTCC TCCCCATAGT CGACAGAAAT CATCGTCAGC CATTATCGAG CTTTCTACTC
CTCCTATTCA AACGGTTGGT CTTCCGCGAA CGACGTATCC TCCATCGCCA TCCACTTCCC
AAGGCATACG CCCCAATAAT GAGGGTATGC GACCACCCGT CCTCGCTATT CCCAAGCGTC
GGTCGTTGAA TGATTTGAAG AATGAGAATG ACCCATCGCC GACGAGCCAA TACTCAGAAT
CAGAGCGGCA AAAGAAGAAG GGAAGACGAA ATGCCGGATG GTTCCATCGT AATGAGGCAC
GGGCACAGGA TAGCGAGAGC GAGGAGTCTG ATGACGAGCC GGGACCATCA AGAAGAAAGG
CAAGGAAAGC GGCTTTGTTG ACGAGCGGGA TGAGAGAACC GGAACCATTT GAGGATATCT
CCAAGTTTGA ACAGCCATCA GGATGGAAAA AGGTTCTGGG AATAGGAAAG AAGGGTTTGG
ATGATCTTGC GGCGCAAGAA AGAGATGAAA ACAAGGCAAG GAAGGCAGCT CTCGCTACGG
AATCTGGTTC ACTGTTTGCT GGTGTTGAAG CTCCTAAGCC TTCACCGAAG AAGAAAGGGT
TCGTGGTTAC AAGGCGTAGC GGAGACAGGC CCGGCGTGAC GCCGATCTCA CCTGCATCCC
CTGAGAGCCA AGCCGGGACA AGCTTCAAAG TCAAACGTAT GGGGCAACCT ACACCAACAC
CGACAAGGGT TGAATCGCCG GCACAGCCTG AATCGGCACA TGCCAGTCCT ATTTCCCCCA
TGAGTCCGGC ACCACTTGCC GGTCTTGCTA CTGGCTCCGT GGTTGGTCCC GGAAAGAAGA
AGAGTTTCCA GGTGATCAGA CCTGCTACAA AGAGTAGCGT GGCTTCTCCC ACGGGAAATG
GTGGTAGTAC AGGTTTTGTC GTGAATCGCC GTTCACCGCA GTCTACTCCA TTGGAGAACA
CATCTACACC TAGTCCACCT CCTCCTGAGC AGGGTGGATA CGCGCCGTCA TTATTTGTGC
CCATCAATCA ACCAGATGAA TCAGAAGGCC TAGCCAAAGA CCCAAGAAGG TCGAGTGAGA
GTCAACAGCG GTACCATGCC CTGTAATGTC GTGACTACCT TCCCAAAAAG GCCCAATTTC
TGGGCAATCT TGTATTTATA CTTGTAGTAT GTGGCGTGTT TTCTTTTCAT GCTTCTGTTA
TAATTAGCCG ACGTAACACG TTCAGAATAT AGTGGAATTG CAATCTTGTT TCATCAGTAG
CATATCAGTC ATCACACGTA GTTCATAGTG TTTTACAAAA CAATGTTGTG TCGATCCATT
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| Protein sequence | MSFRTLSCCS EREPFERNEA TELGLTGDGH DVLRLDLVGV TGAELAGYDN STNKLATLFT
DTHAATARVY SSTTWLCNSL FPAALPEPYY PYNTTYCPLP AGDFAINISI PLYRSYALTT
LHTQVRIVDT SLEAASLTCL NIHVSPYDDS GWYYLLFRYW LVALVAGFWL VSWGARFVTG
WIVGSGVAEY GQKELAGARL MAGGSNNREA TMRKWGTMII SGLSGERLSV SGGLLRFVTP
GVKDILFHIQ YASMLGMIAV NWPEFSYPIF AQGAWGNLVW NTTLVQGSNP TSKRVSIYPD
NYTVPSQFST QMTDPLYPLY LDADAFDPVL DLHNSPDGME SFATAVGLRP QDLFGTCLAI
FLCITAAVIF LSLLLWFLHG LSEYILTKEH KQNSPAAKRT TLGSSPRGSL GGKEALDPQT
SSSEGLGVLP TQSGFFSHKS SSPSLLRRIW LRFRPRGEAG AFHAAALYGN LIRLILVFHL
PVTIFSMYQL CLGGRASIVS RVFAAFSFAF ISVLIPAYIL YRVYNTPTGK LYDATRTLLS
IGPMYTVYVE KKQMFRVFSL TASLIAGIVV GAGQKSGIAQ TIILIVVELA MLIIPGVWYP
WGEGASMGAP NAFLTALRLV SVVLAMLLSR TISMPGTAAD WITYAILIIQ AIIFVFFLLM
LLTKIIEGSI RLFGGVHFDE STHPLDGGIF AAIMDLDCLN PVRGGKAAER RRRKRDSRQL
HKNVYAAGTL STQMMLDRHS QGVPRQTVSE GSTPMLYPVG YQPPLGPPPV DRRSSDDRSD
ERPSGSGNIM DAWRPVSGPG YVPPGAYAPT VTSPTSPPPG SLFDNVQSGP SRGFSVVRGG
RSNYQNPYDI QNLNAGSDTS TPIMTMPVPT IRVSQVGQRP MSPPHSRQKS SSAIIELSTP
PIQTVGLPRT TYPPSPSTSQ GIRPNNEGMR PPVLAIPKRR SLNDLKNEND PSPTSQYSES
ERQKKKGRRN AGWFHRNEAR AQDSESEESD DEPGPSRRKA RKAALLTSGM REPEPFEDIS
KFEQPSGWKK VLGIGKKGLD DLAAQERDEN KARKAALATE SGSLFAGVEA PKPSPKKKGF
VVTRRSGDRP GVTPISPASP ESQAGTSFKV KRMGQPTPTP TRVESPAQPE SAHASPISPM
SPAPLAGLAT GSVVGPGKKK SFQVIRPATK SSVASPTGNG GSTGFVVNRR SPQSTPLENT
STPSPPPPEQ GGYAPSLFVP INQPDESEGL AKDPRRSSES QQRYHAL
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