| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00280 |
|---|
| Symbol | |
|---|
| ID | 3253945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 89520 |
|---|
| End bp | 91165 |
|---|
| Gene Length | 1646 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 638252362 |
|---|
| Product | alcohol dehydrogenase, putative |
|---|
| Protein accession | XP_566462 |
|---|
| Protein GI | 58258099 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATACACACT GATACTTACT AGGAGAGATT TCTGGCTCCC TCCGTAGAAT CCCCTTCTAG
AAAACTGCCA AGATGAGTTC TCCTAAGACC ATGAAAAGAT ACGTCCTCGT GCACCGCAAC
GATTTGAGCG GTATCACCTT TGAGCAAGGT GCTCCTCTTC CGCAAATCAA GAAATCGACA
GAGGTAAGTG CAACAATCCG CTACTGGGTC GTATATTAAA TCTCACTTGG ATAAAAGATT
CTGATAAATA TCAAAGCGTT GTCTTTGAAC GCCCGTGATT TGCAAATCGC TACTAACCAA
TATCCAGCTC CACATCCAAT CCCCGACGGA ATTGTCCCAG TTTCTGGTGT GTAATTTCCA
TGTGACTTGC AGGTTATTTT ACTGAAGCAT AGGAAGATGC AAGCGGAGAG ATTGCCGCTG
TAGGTGATGA TGTTACCGAC TTCAAAGTTG GCGACCGCGT CACGCCCATT ATATTCCAAG
GACATCATCA GGCAAGTTGA CCTGTTTGAG ATGGAGTAAT CGTCTTGGCT GATGGGTAGC
GAACAGGATG AAGATGTGAC ATTGGACAGT ATGAACAGAG GGATTGGTGG AGCAAGGAAC
GGGGTTGCAG CGGAGTATTT CGTCTGCGAC CAGGTAAAGT TTGAAATAGT ATTGTTCAAA
TCGTAAGCTT GGCTGACTCC CTAGCGTAGT CAGAAGCTGT AAAGATCCCG AAGAGTTTTT
CGCACCAAGA TGCCTCAACC TTAGCAGTGA ATTGTCATGA CTTCCCACAA TTTCGTAATA
ATGCTAATAA TGTCAGATCG CATATGCCAC TGCCTGGAGC AGTCTCTATT CCCATCATCC
TCGGCTTCAG TCTGGTGATA CTGTTCTTTG CCTCGGTACC GGCGGTGTCT CTCTTTGTGC
TGCTCAAATT GCCCTCATAT CTGGCGCAAA GGTCATTGTC ACTTCTTCGT CCCAATCGAA
GCTTGATCGC GTAGTCGATC TTCTCAAACC TCTCGTCAAG GGTAACTTTG CCGATACAAT
TCATACCATT GACTATTCCA GGATAGACAA ATGGGATGAA GAAGTGCGTA GGATCACTGA
GGGGAAGGGA GCGAACTTCG TTATTGAGAT TGGCGGCAGA GGAACAATTG GCAAGAGTAT
CAGGAGCACC CGAAGAGGAG GTCTTGTAGC CGTTTCAGGT AAGAGTGGTT CCCTTTTCAA
GATTATTGCT CATCCTTGGC GGATAGGCTA CCTTAGTACC TATAAAGACA TACCCAAGGA
GATTTTGGAA GAGGACCTGG CGCAGACTAT CCTATATTCC GGAAGTTATG TCCGTGGAGT
CTTCGTCTGC AACCGTGAGG ACGAGAAGAG AATGATCTCG GCATTAGAAG TCGGCAATGT
CAAACCTGTC ATAGACAAGG TTTGTTCTAC ACACTCAAAG GGACTCAAAG CCTAAAGAAC
CAAAGGGCTG ATATTTTACT AGGTTTTCGA CTTCGAAAAC CTGAAGGAGG CATATCAGTA
CATGGCTGAT GGCAAGCATT TTGGCAAGAT ATGTGTCACC GTGTAGGGCG TTATCCAGCC
TTCATCACTG TTTCTCGGGT CTACGGCAGA CAGAAAAAGG AAGTCGCTGT TCTGACATCG
GACGAAAGCA AAACCAATCT TATTAA
|
|---|
| Protein sequence | MSSPKTMKRY VLVHRNDLSG ITFEQGAPLP QIKKSTEILI NIKALSLNAR DLQIATNQYP
APHPIPDGIV PVSDASGEIA AVGDDVTDFK VGDRVTPIIF QGHHQDEDVT LDSMNRGIGG
ARNGVAAEYF VCDQSEAVKI PKSFSHQDAS TLAIAYATAW SSLYSHHPRL QSGDTVLCLG
TGGVSLCAAQ IALISGAKVI VTSSSQSKLD RVVDLLKPLV KGNFADTIHT IDYSRIDKWD
EEVRRITEGK GANFVIEIGG RGTIGKSIRS TRRGGLVAVS GYLSTYKDIP KEILEEDLAQ
TILYSGSYVR GVFVCNREDE KRMISALEVG NVKPVIDKVF DFENLKEAYQ YMADGKHFGK
ICVTV
|
|---|
| |