Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00200 |
Symbol | |
ID | 3253542 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 60467 |
End bp | 63152 |
Gene Length | 2686 bp |
Protein Length | 653 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252352 |
Product | transcriptional activator, putative |
Protein accession | XP_566453 |
Protein GI | 58258081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.608184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTACTGTCAC TGCCGTCTCA ATCTCGTTCC AAGGAAGCTT AAAAACACCC ATAAAAAGCC TCTCTGTCTG TTTTACTTCT CTGTAACCTG CGATCATGTC GCCACAGCAA CGAGCGTCGT CGCCCGACGT GTTGGCATCA CCTGTCACTC CTGGAAACGT TTCGACATCT ACTACGAATG CGAACTCTGC TGCTACATCT TCGAACAATG GAGCACCCCA AGCTGTATCT GGATCACCAG CAAACGGAAA TCAAACACTG AGCCCTGGGA GAAAAAGGCG GAAGGTTACA CGGAGTCGAT TGGGATGTCT TACATGCCGC AAGAGGAGAA AACTTTGTGA TATGGCAAAA CCTGTCTGTC AGGCGTGTAC CCGATTGAAG ATTGCAAGTT CAGACATTGT TATCATGATA TGAGCCTTGA ATAACTGACG TTAATGGGCA GCAATGTAGT TGGCCGTCAG AATCAGCTTC CAAGCCTCCT CGATCATCTT CGCAAAGACA ATCTCAAACG CCGGCTGTCA GCGAATCCCC TTTCGTACCT CCTACAGATC TCGATAACAT GACCCATAGT ATATCTCCGT ATATGTCTTA CGGTCCAACT TCCACAATAC TGCCTCACTC CTACACCCCT TCGCAAGCTT CTGCTCCGAG TACTGCTGCT GCTGGACCTC TTTCGGCGTC GAATACTCTG GAGGATTTCA CTCGTATCTT TGGACATATA GAAGAAGATC GGGCCGGATT GCAAATGAAT GAACGAAATG TTCGGCCCTA TGCCATTTAT AGTGCATCTG CAGTCCCAGA AGTTGGTCTA CCACCGGAAC TGAACACAGA AGCCGAGGTG ATGGATTGGT TAAATGGTAG TTGCAGCCTT GACGAGGTAT GTAGCCCCCT ACATGATTGA CCTAGTATTG ATATTCATCC TTCTAGTCGA TGCTCCAACT ATGGGCTGCT GATTGCCTAG CAGTACCCAC TACGCAAACG TTTAACGCCT TCGACTCTCT CAACAACCTC TTGCAACCTA CACCCCCATC CCAAGATCAC GTCGACGCTT CTCATCCGGC TCCATCCCAT GGTCCCTCCG ATCCTCAGCC TCCTCAACCC ATTTCTCGTC CCGAATCTGG TCGTCAGTCC CCTTCACATT TTCATTCCCC ATCTCGTCGT AGCGATCGAG GCACTCCTAC AAGCCAGCCC CAAACCGCCC TCTTACACTA CTTCCACGAT TCTCTCGCTA GACTTGTTTC CTGTACCGGG GATGCTTCCT CAAATGCCTT TGAAGCATTT ACAAAGCTTT CAAATATGGC CGCTGGGCAA GGATCAGCCG GTCAGGGGTT ACATCTGTCT ATCCTTGCGT GGGCGGCTCG ACATGCTGTG AACAGAGGAC TCGTAAAGTA CGAAGCAGCG AGTGAAAAAT TTAGTTCGCA GTCGGCAACA TTGGTGAATA ATAGAATGAG AGATTTGTTT GATGGAGATG GTAACGAGAG AAGGAGCGGA GCAATGCCTA ATCATGAAAA GAATAGAGAG TATATGACAT TGTTGGCGTC TAATCTGATG CTGATGCAAT TCAAGGTGAG TTTTTATTTT CTCGCTCTAT GGATACATTG CTTACATGAC TGTAGATATG CCGTGGTGAT GTATGGGGAT TCGATACGGT GGTTCGGCAT CTGACTGTGC TCGTACCATT TGTCTTTCGG ACAGAGAAAG ACTTCCAAGC CGAGTCAATG CATCACCAGT TGTAGGTTGA TCTCTCAGCT GAAGGGCCTA ATCCTGATGA CTTATCAGCT TTGAGAATGT CCTATATCAT GATGTTCTGG TAAATAAGAA TTCTCTACTC TCAAAAGAAA AGACGCAATT GACCACTTTC GCAGGGCTCA TTCATCCTCA ATCGCGCTCC CATGGTCCCC TCCTCCCTCG TTAGCCACTA CTGCAGTTTT AACCTTGAAG CTCTCAATAC CCTCACTGGG GCCAGCTTAC CGCTTTTCTC CACAATGCAT CGCCTTGCAG CTCTAGTGCG ACAACGAAGA GGAAGGAGAG GTAAAGGATG GAGTGACGAA GACTTGTTTG ATGCGTTGCA GCGAGCGATG GAGCTGGAGA AGGATCTAAC AGATGAAAAG AAGAGACTCG ATGCGCTCTT AATTGGTACG TTCTCTATAC TTTTTTTGTC TATATAAGCC TAACCATTGA TTTTGGAAAT GTTAGCTAAA CCGCATGTCA AGCCTCATCG TTACCTGCAC GAAGCATTCC GATTGACATG CCTCATCCAA CTCCACCACG ATGTCCTCTG TGAGCCCCCT TCATCTCTGC ACATTCGCCT CCTCGTCCGG CAATCCCTTT CATTGCTTGA AACAATGATA GATCAGAGCT TGCCAGGGTT ATGTTCAGCC CACTGGGTGA TATTCCAGAC GGCGTTGTGC TGTGTTGCCG GAGGACAGGA TAAAGCCGAA CTGGATGATC GCGAGACGGT GGAGCGGATA TATGATGATA TCTTGCAAGT CTGAATGCTC AATCTAAAAC AGGACAAGGT GACTGACCCA ATGATTCGCT ATAACAGACA TGAGTACGGG TTTCTCAACG TTGAGCGATC ACGGAAAATT GTTCATGAAG TTTGGGCGAG AAATCAGGAT GGACAATTGC ATATGGATTG GTTAGATCTT TTGGAAGAAT ATGATTGGGA AATCTTTGTT GTTTGA
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Protein sequence | MSPQQRASSP DVLASPVTPG NVSTSTTNAN SAATSSNNGA PQAVSGSPAN GNQTLSPGRK RRKVTRSRLG CLTCRKRRKL CDMAKPVCQA CTRLKIQCSW PSESASKPPR SSSQRQSQTP AVSESPFVPP TDLDNMTHSI SPYMSYGPTS TILPHSYTPS QASAPSTAAA GPLSASNTLE DFTRIFGHIE EDRAGLQMNE RNVRPYAIYS ASAVPEVGLP PELNTEAEVM DWLNGSCSLD ESMLQLWAAD CLAVPTTQTF NAFDSLNNLL QPTPPSQDHV DASHPAPSHG PSDPQPPQPI SRPESGRQSP SHFHSPSRRS DRGTPTSQPQ TALLHYFHDS LARLVSCTGD ASSNAFEAFT KLSNMAAGQG SAGQGLHLSI LAWAARHAVN RGLVKYEAAS EKFSSQSATL VNNRMRDLFD GDGNERRSGA MPNHEKNREY MTLLASNLML MQFKICRGDV WGFDTVVRHL TVLVPFVFRT EKDFQAESMH HQFFENVLYH DVLGSFILNR APMVPSSLVS HYCSFNLEAL NTLTGASLPL FSTMHRLAAL VRQRRGRRGK GWSDEDLFDA LQRAMELEKD LTDEKKRLDA LLIAKPHVKP HRYLHEAFRL TCLIQLHHDV LYMSTGFSTL SDHGKLFMKF GREIRMDNCI WIG
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