Gene CNA00190 details

Gene Information

• Locus tag: CNA00190
• ID: 3253540
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: -
• Start bp: 57717
• End bp: 59788
• Gene Length: 2072 bp
• Protein Length: 460 aa
• GC content: 50%
• IMG OID: 638252350
• Product: aminotransferase, putative
• Protein accession: XP_566451
• Protein GI: 58258077
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0436] Aspartate/tyrosine/aromatic aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00967249
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCGGGCCTTC GTCGAGCACA TCTCATCGAA GGAAATCCGC CCCTTACTTA CTTTTTCTCT 
TTCTCTATCT CTTTCTCCCC AAGAAAAGTA TACCCAGCTG CACCTATATC TGAGCAGTGA 
GTTCCCCCAG TTGATATCCT TCCTCCTTCC TGTTCGAGTA GCTTGGGGCG GGCAGACGTT 
TTACGGGGGG TTCATGGTCC GAGCTGGATA CGTAACTTCG ACTCGCAAAA AATGGCATCC 
GCGCCTGGCG TCAACAAATA TCAATCCATG GCATACTTGC TGACGAAATC ACTATCTTTA 
CCATTTTAGC CAAAAGCTCG TTATATGCCC CGTATCTCAG TCCCTGCATT CGCAAAAACC 
GTTTCGTCCA GACTCAACTT TACATCTACA AGAACACTCC TATACACTCG CAGAATGTCT 
ACAACCCCGA ACGCTGTTAT CCCTCAGGCG AAGAGGATGT TTGACGGTGC GACGCACAAG 
TTGGATGTGT GGTCCATCTT CACGTAAGTC CAAAATTCGT CTTCCGCCTG ACAAACCGGA 
GTGATGCTTA AATAAAGGTA CGTTTTAGCC CCGCCAACGT CCCCGCGGAC TGTATCAACC 
TCGGTCAAGG TTTCATGAAC TGGGCTCCTC CAGACTGGAT CCGTGCCGAA TCTCACGAGT 
CTATGGACCA CGACATTATG TCAAACCACT ATTCTCACCC TCGAGGTAGG CCTAGGTTGT 
TGAAGGCCAT CAGCAAGCAC TACAGCCCTC AGTTTGAGAA TATTGTTGCC CGAGGAAAGG 
ACTTGACTAA TGAGGAGATT TTGGTTACTT CCGGTGCCAA CTGCGGTGAG TTGTGTTTTG 
ATACGATACA GATGCACAAG AGGGTAGAAC TGATATGGGG TGTAGGTATG TTTGCCGCTC 
TCACGGCGCA CTGTGAGCCC GGAGATGAAG TCATCTGTAT CGAACCCTAC TTTGACCAGT 
ACTTTGCTTC TATCCACTTC CAAGGTGCCA AACCCGTCTT TGTGCCCCTT CACCCTCCTA 
CCGGCAAAGG TATCAAGCAT GGCGGAGACT GGACGCTCAA CATAGATGAA TTTGCCGCTG 
CGTTCACTCC CAAAACCAAG GCGGTGATTA TCAACACCCC TCATAACCCG GTTGGCAAAG 
TGTTCACCAA GGAGGAGTTG GAGCAAATTG CCAAGGTTTG TATTGAGAAG AATGTTTTGG 
TGCTTGCGGA TGAGGTGTAC GACTGTATGG TGTACGACGG GAATAAGCAT TTCAGGATTG 
CTACATTGCC TGGTATGTGG GAGAGGACTT TGACTGTGGG ATCTGGTGGA AAGTCGTTTG 
CTTGTACCGG TTGGCGAGTT GGTGAGTCCA TCGATTTCCT TTTTTTCTTG TCCTTTTTTC 
TAGGTCAGAT GCTGACTCGG TATAGGATGG CTCATCGGTC CCCCCCAACT TACCGCTGCT 
ACCCTCGCCG CGCACAGCCG AATTGTTTTC TGCACCAACT CTCCTATGCA AGAAGCGGTT 
GCTATCGGTC TCGAAAAAGC TGCTGAGCAC AAGTTCTTCG AGGAACAAGT CGCTGCTTAC 
GAAGAGCGCC GAGACATTCT TTGCTCGTAC TTTGACCAAA TTGGTTTGAG TTACACCAAG 
CCTGAAGGAT CATACTTTTT GTTGGTGGAT ATTAGCCCCG TCAAGGTGCC CGAGGGTTAC 
CCTATCGTAG AGACCTGTAA GGGCCGAGGA AAGGACTTTG AGTTTTGTTG GTGGTTGTGT 
CAGGAGCTCA AGGTGGTAGG CATTCCTCCT TCCGAGGTTA GTACCATTTT GCTCTCTTCA 
AGGAGGTGCT TTGCTGATAT CTGTGATAGT TCTACAGCGA GGAGCACGTC AACATTGGTG 
AGAGGTTTGC TCGTTTCGCT TTCGTGAGTC GTCTTTCCTT GTAGGCTATA ATAGCATGTA 
GCTGACGGCT TGTGTAGTGC AAAGACCCCG AACTTTTGCA TGCTGCGGGC AAGAGGTTGC 
TCAAGCTGAA GGAGTACTTG TAAGGAGGGG GATGAGGCAT AGGAATAAAA GTGGGCAGAG 
GGGTTGTACA TGCATTCATC GGACATTCGC GG 

 

Protein sequence

MPRISVPAFA KTVSSRLNFT STRTLLYTRR MSTTPNAVIP QAKRMFDGAT HKLDVWSIFT 
PANVPADCIN LGQGFMNWAP PDWIRAESHE SMDHDIMSNH YSHPRGRPRL LKAISKHYSP 
QFENIVARGK DLTNEEILVT SGANCGMFAA LTAHCEPGDE VICIEPYFDQ YFASIHFQGA 
KPVFVPLHPP TGKGIKHGGD WTLNIDEFAA AFTPKTKAVI INTPHNPVGK VFTKEELEQI 
AKVCIEKNVL VLADEVYDCM VYDGNKHFRI ATLPGMWERT LTVGSGGKSF ACTGWRVGWL 
IGPPQLTAAT LAAHSRIVFC TNSPMQEAVA IGLEKAAEHK FFEEQVAAYE ERRDILCSYF 
DQIGLSYTKP EGSYFLLVDI SPVKVPEGYP IVETCKGRGK DFEFCWWLCQ ELKVVGIPPS 
EFYSEEHVNI GERFARFAFC KDPELLHAAG KRLLKLKEYL