Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00090 |
Symbol | |
ID | 3254004 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 30054 |
End bp | 30884 |
Gene Length | 831 bp |
Protein Length | 216 aa |
Translation table | |
GC content | 44% |
IMG OID | 638252337 |
Product | conserved hypothetical protein |
Protein accession | XP_566441 |
Protein GI | 58258057 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0822069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTA CAATCCTCCC CCTCGAACTT GTCGACAGAT GTATCGGCTC CCCTATCTGG GTCTTGATGA AGAATGAACG AGAGTTTACT GGGACTTTGA TGGGTTTCGA TGACTATGTT AGTGAGTATG ATTCAGTTTA TTTGATGACG AAAGGTGTTT GGATTTGGGT AAAGGTTTGA GCTTACGATA TATTCCATCT CCTTTTAGAC ATGGTTTTGA AAGATGTCAA GGAATAGTCA GTTTAGTTCC TTAATCAAAA CAATCAACTT CAACAGATTG AGGAGATGTG CTGATCAAGG AATTATCTGT TGGTTGTTGT CGACAACAGC GAAGTTACTG CTTCGGGAAT CACAGAGACC GATCTTGGGG ATACTTTGTT AAACGGGAAC AACATCGCCA TGGTACGTAC AACTACCCAT CTTCCCTCGC CTCTCGAAAT CGAGCTTTGC TCTTGGTATG GCTATTATTG TACTATCAGC CGTAATGGCA TGTCTGCTCC TTTCTTTTTG GGAAGAGACT GCTTTCCACG GCGAGATTTC ATGCTATGTG TCTTGTGGGG AAGAGAATAC TGGGGGCGGA ATGCTGATAT ATTTCCTTCC TACCCACACA GCTTATACCA GGTGGCAAGG GACCCAAGGC TTAGATCCTA TCCATCCATC CATCTCCCGA CAAATACAAA TACAACAAAT CATAAAACAC CAACCACTAT TATGAATATC GAGATGAAGA TGAAGGTGCT GAGGCAGAGG GACAATACGG GACGGAAAAG GAGTGATGTT GATGTGGCAG GATACCGTCG GCAGTTATGG ATCGAGATTG GTCTGGGATG A
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Protein sequence | MASTILPLEL VDRCIGSPIW VLMKNEREFT GTLMGFDDYV NMVLKDVKEY EVTASGITET DLGDTLLNGN NIAMVRTTTH LPSPLEIELC SWYGYYCTIS RNGMSAPFFL GRDCFPRRDF MLCVLWGREY WGRNADIFPS YPHSLYQVAR DPRLRSYPSI HLPTNTNTTN HKTPTTIMNI EMKMKVLRQR DNTGRKRSDV DVAGYRRQLW IEIGLG
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