Gene CNA00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00080 
Symbol 
ID3253721 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp28166 
End bp29480 
Gene Length1315 bp 
Protein Length211 aa 
Translation table 
GC content45% 
IMG OID638252336 
Productexpressed protein 
Protein accessionXP_567247 
Protein GI58259669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.114655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCTGGTAGC TTACGTAGTT TGTACGTACA CCAGATTGTG GATAGAGTCG CAATTTGTAC 
AGCTTCCAAA ACAAACAGTG TCTCACGCAG GCGACTTAAC TATCCCACTC CAATCGTTTT
CTTCATAGCA AAGATACACA TCTATAACAA GACTACGCCT CGAGGCTCAT CCGAAGAAGA
GGCGCTCATA AGGACAACAG CTATCACCAG CGAGATAAAA ACGACGCAAC TTTCTACTAT
ACTCTTGCTC CGCAAGTCGC TCTCTATTTG CCATTCGCCT CTTTATATTG TATCGTGGCT
ATACCTCTGT CCGCCTCATT CTAGTAGGGC TTCTCAAACA GCTCTCTCCC AAATCCATCC
CCAATCATCA CCACACACCT ACGTTAATCA CACAAGATGC TCAACCCACG CTCTCTACGC
TTCGACACCA GGCAAATAGA TTATACTCAT CATCATCATG ACTACGACTA CACCCTCCCA
AAATCTACAC TCATCTCCCT TATAATCGGC GTTGGCACAT TTGCTGTTAC GTCCATATTG
GTTGTTTTCT CCCTCCGAAT CTATCTCAGG AGACGGTCGC TTAGACGAGC TCAAGCTATG
AGTGGAAGTG GCGAAGATTT GAGAGAGATA ATGAGAGAGT ATCTCGATGA AGGAGTAAAG
GGAAATGAAG GGACAAAACC TGAGATGTGG GAGGTGGAGA TGAAATATGA GGACGAGATT
ACTCAGGTAA GTCGATTGCT ACTTTCTTTT CCCCGCTTCG ATTTAGGATA CTGGGCACTA
AGCAATACTG ATCATACCTG TCTTAGCCAC TCACACTTCG CGAACCGACT TCTACTCGTC
CGCACCTCGC TCAACCTGAT ATTTCGAAAG CGATATCCAT TTTTATCGCT TTCCCTGCTC
CTTATTCCTC TGGCCCTGAC GACCTCCCAG AGATCGTACT TGGCACAGCG ATTTTCCATC
AATCGACATT GTCGTCCACA ATCTCCCGCT TTTCGGAGAA CGAAAAGACT CTTTCAAGAA
ATACATCAGA GGAGGGGAGT TATGTAGTGA AAGATAAGAA TACAGAGAAA GACGGGACAA
ACGTCGTCGT TCAGGCTTTG GAATACGTCT GACCAGGCCA GATAGAACAA CGTTGAAAAA
ACGAAAAAGG GCACAGGAAA GGGAATCATG TGGGTCTGTG GGTCGAGAGT GGATCTTATT
GTCGCGATTG TCATCATCAT GACTTCATTT AATGTTCATG TTGTAATTAA TACGCTCTAT
GTTGTAACGT ATCTACGATA TTATGTTTGG GTAAAGGGTA TAGGAAGGAT CAGTA
 
Protein sequence
MLNPRSLRFD TRQIDYTHHH HDYDYTLPKS TLISLIIGVG TFAVTSILVV FSLRIYLRRR 
SLRRAQAMSG SGEDLREIMR EYLDEGVKGN EGTKPEMWEV EMKYEDEITQ PLTLREPTST
RPHLAQPDIS KAISIFIAFP APYSSGPDDL PEIVLGTAIF HQSTLSSTIS RFSENEKTLS
RNTSEEGSYV VKDKNTEKDG TNVVVQALEY V