Gene SEA0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSEA0020 
Symbol 
ID3239139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_006663 
Strand
Start bp15693 
End bp16367 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content35% 
IMG OID637622512 
ProductIS431mec-like transposase 
Protein accessionYP_187549 
Protein GI57854772 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATT TCAGATATAA ACAATTTAAC AAGGATGTTA TCACTGTAGC CGTTGGCTAC 
TATCTAAGAT ATGCATTGAG TTATCGTGAT ATATCTGAAA TATTAAGGGG ACGTGGTGTA
AACGTTCATC ATTCAACGGT CTACCGTTGG GTTCAAGAAT ATGCCCCAAT TTTATATCAA
ATTTGGAAGA AAAAGCATAA AAAAGCTTAT TACAAATGGC GTATTGATGA GACGTACATC
AAAATAAAAG GAAAATGGAG CTATTTATAT CGTGCCATTG ATGCAGAGGG ACATACATTA
GATATTTGGT TGCGTAAGCA ACGAGATAAT CATTCAGCAT ATGCGTTTAT TAAACGTCTC
ATTAAACAAT TTGGTAAACC TCAAAAGGTA ATTACAGATC AGGCACCTTC AACGAAGGTA
GCAATGGCTA AAGTAATTAA AGCTTTTAAA CTTAAACCTG ACTGCCATTG TACATCGAAA
TATCTGAATA ACCTCATTGA GCAAGATCAC CGTCATATTA AAGTAAGAAA GACAAGGTAT
CAAAGTATCA ATACAGCAAA GAATACTTTA AAAGGTATTG AATGTATTTA CGCTCTATAT
AAAAAGAACC GCAGGTCTCT TCAGATCTAC GGATTTTCGC CATGCCACGA AATTAGCATC
ATGCTAGCAA GTTAA
 
Protein sequence
MNYFRYKQFN KDVITVAVGY YLRYALSYRD ISEILRGRGV NVHHSTVYRW VQEYAPILYQ 
IWKKKHKKAY YKWRIDETYI KIKGKWSYLY RAIDAEGHTL DIWLRKQRDN HSAYAFIKRL
IKQFGKPQKV ITDQAPSTKV AMAKVIKAFK LKPDCHCTSK YLNNLIEQDH RHIKVRKTRY
QSINTAKNTL KGIECIYALY KKNRRSLQIY GFSPCHEISI MLAS