Gene SEA0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSEA0016 
Symbol 
ID3239143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_006663 
Strand- 
Start bp12009 
End bp12659 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content30% 
IMG OID637622508 
ProductTetR family transcriptional regulator 
Protein accessionYP_187545 
Protein GI57854768 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAG ATATTAAGTC ATTAGTTGAA ACCATTGTGC CTCAACTTGA ATATTTAAGC 
GATAAACAAA GACGTGTCAT AGAAAGTGCT ATTGCATTAT TCAGTGAACA AGGATTTGAT 
AAAACGAGTA CTAAAGAAAT TGCGCAGCGT GCAAATGTCG CAGAAGGAAC GGTATTTAAG 
CAGTTTAAAA GTAAAAGAAT GTTATTATAC GCAGGATTAA TTCCAATTTT AAGAGATCAT 
ATCGCACCTG TAGCTGTTAA ACAATTTACA GATGAATTAA ACGAAGTAAC CCATTTTGAT 
GCATTTATAA ATTTATTTGT AGAAAATAGA TCTAAATTTA TTTATGACAA TAGACGTATT 
CTTAAAGTCA TCTTAAATGA AGCTATTACT AATGAAGATT TTCAAAATAT ATTAGTTAAT 
ATTTTCACCC ATAAATTAAC GAGTAAATTA AAAGATAAAA TTGAATGGTT TATCGATAAT 
GGTGACATGC GCAATGTTAA ACCTGAGTTT TTTATACGTA CGGTCGTCGC ACAAATTTTA 
AATTTAAATA TCCCAATAAT AGTTAATAAT GACTATACTA AGGGTGAAAA CTATCAGCAG 
TTTGCGTTAT TCGTAAAAGA GGGCTTATAT AGGATGTTTA AGCGAGAATA G
 
Protein sequence
MNQDIKSLVE TIVPQLEYLS DKQRRVIESA IALFSEQGFD KTSTKEIAQR ANVAEGTVFK 
QFKSKRMLLY AGLIPILRDH IAPVAVKQFT DELNEVTHFD AFINLFVENR SKFIYDNRRI 
LKVILNEAIT NEDFQNILVN IFTHKLTSKL KDKIEWFIDN GDMRNVKPEF FIRTVVAQIL 
NLNIPIIVNN DYTKGENYQQ FALFVKEGLY RMFKRE