Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SEA0008 |
Symbol | |
ID | 3239135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_006663 |
Strand | + |
Start bp | 6361 |
End bp | 7035 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637622500 |
Product | IS431mec-like transposase |
Protein accession | YP_187537 |
Protein GI | 57854760 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 0.297638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATT TCAGATATAA ACAATTTAAC AAGGATGTTA TCACTGTAGC TGTTGGCTAC TATCTAAGAT ATGCATTGAG TTATCGTGAT ATATCTGAAA TATTAAGGGA ACGTGGTGTA AACGTTCATC ATTCAACGGT CTACCGTTGG GTTCAAGAAT ATGCCCCAAT TTTATATCAA ATTTGGAAGA AAAAGCATAA AAAAGCTTAT TACAAATGGC GTATTGATGA GACGTACATC AAAATAAAAG GAAAATGGAG CTATTTATAT CGTGCCATTG ATGCAGAGGG ACATACATTA GATATTTGGT TGCGTAAGCA ACGAGATAAT CATTCAGCAT ATGCGTTTAT CAAACGTCTC ATTAAACAAT TTGGTAAACC TCAAAAGGTA ATTACAGATC AGGCACCTTC AACGAAGGTA GCAATGGTTA AAGTAATTAA AGCTTTTAAA CTTAAACCTG ACTGCCATTG TACATCGAAA TATCTGAATA ACCTCATTGA GCAAGATCAC CGTCATATTA AAGTAAGAAA GACAAGGTAT CAAAGTATCA ATACAGCAAA GAATACTTTA AAAGGTATTG AGTGTATTTA CGCTCTATAT AAAAAGAACC GCAGGTCTCT TCAGATCTAC GGATTTTCGC CATGCCACGA AATTAGCATC ATGCTAGCAA GTTAA
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Protein sequence | MNYFRYKQFN KDVITVAVGY YLRYALSYRD ISEILRERGV NVHHSTVYRW VQEYAPILYQ IWKKKHKKAY YKWRIDETYI KIKGKWSYLY RAIDAEGHTL DIWLRKQRDN HSAYAFIKRL IKQFGKPQKV ITDQAPSTKV AMVKVIKAFK LKPDCHCTSK YLNNLIEQDH RHIKVRKTRY QSINTAKNTL KGIECIYALY KKNRRSLQIY GFSPCHEISI MLAS
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