Gene SEA0006 details

Gene Information

• Locus tag: SEA0006
• ID: 3239153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_006663
• Strand: +
• Start bp: 5042
• End bp: 5620
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637622498
• Product: resolvase family site-specific recombinase
• Protein accession: YP_187535
• Protein GI: 57854758
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1961] Site-specific recombinases, DNA invertase Pin homologs

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 0.105184
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAATAG GTTATGCAAG AGTTTCAACT GGATTACAAA ATTTGAATTT ACAGGAGGAT 
CGATTAAATA CATATGGTTG TGAAAAGATA TTTAATGACC ATATGAGTGG TTCAAAAAGT 
AAGCGACCTG GTTTAGATAA AGCAATTGAA TTTGCGAGGT CAGGAGATAC GATTGTTGTT 
TGGAGATTAG ATAGACTAGG ACGGAACATG GAGGATTTAA TCACGTTAGT TAATGAACTT 
AACGAACGAG GTGTGAGTTT TCATAGTTTA GAAGAAAATA TAACGATGGA TAAATCAAGT 
TCTACAGGAC AATTATTATT TCATTTATTC GCAGCATTTG CAGAGTTTGA ACGTAATTTA 
ATTTTAGAGC GATCATCAGC CGGTCGAATT GCAGCACGTG CTAGAGGCCG ATATGGAGGT 
AGACCTGAAA AATTAAATAA ACAAGATTTA AACTTACTTA AGACACTTTA TGATAATGGT 
ACGCCAATTA AAACAATTGC AGAGCAGTGG CAAGTTTCAC GTACAACTAT TTATCGTTAT 
CTCAATAAAT TAGAGGCAAA AGAGAATAAA AACAAGTAG 

 

Protein sequence

MKIGYARVST GLQNLNLQED RLNTYGCEKI FNDHMSGSKS KRPGLDKAIE FARSGDTIVV 
WRLDRLGRNM EDLITLVNEL NERGVSFHSL EENITMDKSS STGQLLFHLF AAFAEFERNL 
ILERSSAGRI AARARGRYGG RPEKLNKQDL NLLKTLYDNG TPIKTIAEQW QVSRTTIYRY 
LNKLEAKENK NK