| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SEA0004 |
|---|
| Symbol | blaR1-2 |
|---|
| ID | 3239156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006663 |
|---|
| Strand | + |
|---|
| Start bp | 2651 |
|---|
| End bp | 4408 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 637622496 |
|---|
| Product | regulatory protein BlaR1 |
|---|
| Protein accession | YP_187533 |
|---|
| Protein GI | 57854756 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0356117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT TACTAATAAT GAGCGTAGTA AGCTTTTGTT TTATATTTCT ATTGTTAGTA
TTTTTTAGGT ATATATTAAA ACGCTATTTT AATTATAGTT TAAATTATAA AGTTTGGTAT
CTAACTGTGC TTGCTGGATT AATTCCTTTT ATCCCAATTA AATTCTCTTT TATAAAATTT
AATAATGTGA ATAATCAATC GCCCACAGTT GAAAGTAGGT CACACGACTT GAACCATAAC
ATAAATACCA CCAAACCTGT TCAAGAGTTC ACAACAGATA TCCATAAGTT TAATTGGGAT
TCAATTGATA ATATCTGCAC AGTTATTTGG ATAGTTTTGG TTATTATTTT AAGTTTTAAA
TTTTTGAAAT CCTTATTATA TCTTAAATAT TTAAAGAGAC AGTCACTTTA TCTAAACGAA
AATGAAAAAA ATAAAATAGA TACGATACTT TTCAACCATC AATATAAAAA AAATATTGTG
ATTCGAAAAG CAGAGACTAT TCAATCTCCA ATAACTTTTT GGTATGGGAA ATATATTATT
TTGATTCCTA GTTCATATTT TAAAAGTGTA ATTGACAAAA GACTAAAATA TATAATATTG
CATGAATATG CTCATGCTAA AAATAGAGAT ACTTTACATT TAATTATCTT TAATATCTTC
TCTATTGTTA TGAGTTACAA TCCATTAATA CATATTGTAA AAAGAAAGAT AATTCATGAC
AATGAAGTAG AAGCCGATAG ATTTGTTCTT AATAATATTA ACAAAAATGA ATTTAAAACT
TATGCGGAAT CTATTATGGA CTCCGTATTA AATATTCCAT TTTTTAATAA AAATATATTA
AGCCATTCAT TTAATGGTAA AAAGTCATTA CTCAAAAGAA GATTAATTAA TATAAAAGAA
GCCAATTTGA AAAAACAGTC CAAATTAATT CCAATTTTTA TTTGTATTTT TACTTTTTTG
CTCATGGTAA TTCAAAGCCA GTTTTTGATG GGGCAATCCA TAACTGATTA TAATTATAAA
AAGCCCTTAC AGAACGATCA CCAAATTTTA GATGAAAGTA AAAATTTTGG TTCAAATAGT
GGATCTTTCG TCATGTACAG CATGAAGAAA GACAAATACT ATATTTATAA TGAAAAAGAA
AGTAGAAAGA GATATTCTCC TGATTCAACT TATAAAATTT ATTTAGCGAT GTTTGGACTT
GACCATCATA TCATAAGTGA TAAAAATTCA CGTATGTCAT GGAATCATAA ACATTATCCT
TTCGAGTCTT GGAATAAGGA ACAAGATTTA AATACAGCAA TGCAAAATTC AGTTAATTGG
TACTTCGAAC GTATTAGTAA TCAAATACCA AAGAACTATA CTGCGGCTCA ACTCAAGCAA
TTAAATTATG GTAATGAAAA CTTGGGAAGT TATAAAAGCT ATTGGATGGA AGATAGTTTG
AAAATATCTA ATCTTGAACA AGTAATAGTT TTTAAAAATA TGATGGAACA AAATAACCAT
TTTAGTAAAA AAGCAAAGAA TCAATTATCT TCTTCATTAT TGATTAAGAA AAATGAAAAG
TATGAACTGT ATGGGAAAAC AGGTACAGGT ATAGTAAACG GGAAGTATAA TAATGGGTGG
TTTGTAGGTT ACGTAATTAC AAATCATGAT AAGTATTATT TTGCTACACA TTTATCAGAT
GGAAAGCCGT CTGGGAAAAA TGCTGAATTA ATCAGTGAAA AAATATTAAA AGAAATGGGT
GTTTTAAATG GCCAATAA
|
|---|
| Protein sequence | MAKLLIMSVV SFCFIFLLLV FFRYILKRYF NYSLNYKVWY LTVLAGLIPF IPIKFSFIKF
NNVNNQSPTV ESRSHDLNHN INTTKPVQEF TTDIHKFNWD SIDNICTVIW IVLVIILSFK
FLKSLLYLKY LKRQSLYLNE NEKNKIDTIL FNHQYKKNIV IRKAETIQSP ITFWYGKYII
LIPSSYFKSV IDKRLKYIIL HEYAHAKNRD TLHLIIFNIF SIVMSYNPLI HIVKRKIIHD
NEVEADRFVL NNINKNEFKT YAESIMDSVL NIPFFNKNIL SHSFNGKKSL LKRRLINIKE
ANLKKQSKLI PIFICIFTFL LMVIQSQFLM GQSITDYNYK KPLQNDHQIL DESKNFGSNS
GSFVMYSMKK DKYYIYNEKE SRKRYSPDST YKIYLAMFGL DHHIISDKNS RMSWNHKHYP
FESWNKEQDL NTAMQNSVNW YFERISNQIP KNYTAAQLKQ LNYGNENLGS YKSYWMEDSL
KISNLEQVIV FKNMMEQNNH FSKKAKNQLS SSLLIKKNEK YELYGKTGTG IVNGKYNNGW
FVGYVITNHD KYYFATHLSD GKPSGKNAEL ISEKILKEMG VLNGQ
|
|---|
| |