Gene SEA0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSEA0002 
Symbol 
ID3239134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_006663 
Strand- 
Start bp988 
End bp1632 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content33% 
IMG OID637622494 
Producttruncated IS431mec-like transposase 
Protein accessionYP_187531 
Protein GI57854754 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.00153541 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATT TCAGATATAA ACAATTTAAC AAGGATGTTA TCACTGTAGC CGTTGGCTAC 
TATCTAAGAT ATGCATTGAG CTATCGTGAT ATATCTGAAA TATTAAGAGA ACGTGGTGTA 
AACGTTCATC ATTCAACGAT CTACCGTTGG GTTCAAGAAT ATGCCCCAAT TTTATATCAA 
ATTTGGAAGA AAAAGCATAA AAAAGCTTAT TACAAATGGC GTATTGATGA GACGTATATC 
AAAATAAAAG GAAAATGGAG CTATTTATAT CGTGCCATTG ATACAGAGGG ACATACATTA 
GATATTTGGT TGCGTAAGCA ACGAGATAAT CATTCAGCAT ATGCGTTTAT CAAACGTCTC 
ATTAAACAAT TTGGTAAGCC TCAAAAGGTA GTTACAGATC AGGCACCTTC AACGAAGGCA 
GCAATGGCTA AAATAATTAA AGCTTTTAAA CTTAAACCTG ACTGTCATTG TACATCGAAA 
TATCTGAATA ACCTCATTGA GCAAGATCAC CGTCATATTA AAGTAAGAAA GACAAGATAT 
CAAAGTATCA ATACGGCAAA GAATACTTTA AAAGGTATTG AATGTATTTA CGCTCTATAT 
AAAAAGAACC GTAGATCTGA AGAGACCTGC GGTTCTTTTT ATTAA
 
Protein sequence
MNYFRYKQFN KDVITVAVGY YLRYALSYRD ISEILRERGV NVHHSTIYRW VQEYAPILYQ 
IWKKKHKKAY YKWRIDETYI KIKGKWSYLY RAIDTEGHTL DIWLRKQRDN HSAYAFIKRL 
IKQFGKPQKV VTDQAPSTKA AMAKIIKAFK LKPDCHCTSK YLNNLIEQDH RHIKVRKTRY 
QSINTAKNTL KGIECIYALY KKNRRSEETC GSFY