| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl2930 |
|---|
| Symbol | |
|---|
| ID | 3113361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | - |
|---|
| Start bp | 3342758 |
|---|
| End bp | 3344428 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637584706 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_128254 |
|---|
| Protein GI | 54295839 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAC GACGTATAGT TTTATATATG GCGCTTGCGC TTATTGGTTT ATCACTTTGG
AACGCTTGGC AAATTGATTA TCCAGCCAAG CAACCAGTTG AAGAGAAAAC AGCAAGCCAA
TTAACATCAG ATGGGCATTT GTTACCACAA ATAATACCTT CTAATGCGGA GCAACCCGTA
ACTTTGAAAG CAGAGGAAAA AGCAAGCAGC GGTAAACAAT TGATTCAGGT TAAAACAGAT
ATTTTGGATG TCGACATTGA TTTAAAAAAT GGAGATATTG TTAAAGGTTT ATTGCTTGAC
TATCCACTAA GTGTTGAAGA TAAAAATAAG CCATTCCCTC TCTTGCAAAA TCAGGCCAGC
CAGAGATATG TAGCGAACAG TAGCCTTTTT GTTTTAGATG GCCAGACACC ACAATCATTG
GATTTTGATT TTACATCGGA AAAAGAATAT TACGAATTGA AACCGGATCA AAACCAGCTG
ATAGTCACTC TGAATGGCAA AAGCGAAGAC GGTTTGGATG TGAAAAAGGA ATTTGTTTTT
ACAAAGGGAA GTTATTTAAT CGAAGTCAAT TACAAGATAG CCAATATCGG TAATTCGTTA
TGGAAAGGGT ATTTTAATAC CCAGTTATTG CGCAGTTCTC CCAAAGAAGA CAAATCGAGC
ATTTTCCATA TTGGCTCGTA TACAGGTGCT TCCTTTTCAA ATCCTGGAAA AAATCGTTAC
CAAAAAGTCA GTTTCAGTGA CATGAGCAAA TCTAACCTGG ATGTGGATGC GAAAGGTGGT
TGGATTGCTA TGCAACAACA CTATTTTTTG AGTGCTTGGG TTCCCAATGC GGATAGTGAA
AACAAGTTTT ATACATTAGC TACGGATAAA GATTATACTA TTGGAGCAGT AAGCCAGCCT
ATTACGGTCA AACCAAAAGA AGATAAAATT GTAGGATCCA AATTATACAT AGGGCCAGAA
ATTACCAGTG TTTTAAAAGG CATATCCCCA TCTCTGGATT TAACGGTGGA CTATGGCATT
TTGTGGTTCT TGTCTTCGTT ATTATTTTCT TTAATGAAAG CAATTTATAC TGTTGTTGGG
AATTGGGGTT GGTCAATTGT TCTTGTGACT GTCCTAATTA AATTGGCATT TTATCGATTA
TCAGCTACAA GCTATAAATC CATGGCTAGT ATGCGGAAGT TGCAGCCTAA GTTGCAAGCT
TTGCGTGAGC GATATGGTGA TGATAAAGCT AAAATAAGCC AAGCTACCAT GGAACTTTAT
AAGCAAGAAA AAGTAAATCC TTTAGGCGGT TGTTTACCTA TATTAATTCA AATTCCAGTT
TTTATAGCGC TCTATTGGGT TTTACTGGAA AGTGTTGAAT TAAGACAAGC TCCATTTATA
TTTTGGATAA ATGATTTGGC TTCAGCGGAT CCTTACCATG TTCTTCCATT AATCATGGGA
GCAACCATGT TGATTCAGCA AAAGCTCAAT CCAGCACCAG CTGATCCAAT GCAAGCTAAG
GTAATGATGT TTTTACCCAT ATTATTTACC GGACTGTTCT GGAATTTTCC TTCTGGTCTG
GTTTTGTACT GGATTGTGAA TAATACTTTA TCAATATTAC AGCAATGGTA CATCACCAGA
AAATACTCAG ATGAAAAGCC AGCTAAAAAG GTTGTTGCCA CAGCAAAATA A
|
|---|
| Protein sequence | MDIRRIVLYM ALALIGLSLW NAWQIDYPAK QPVEEKTASQ LTSDGHLLPQ IIPSNAEQPV
TLKAEEKASS GKQLIQVKTD ILDVDIDLKN GDIVKGLLLD YPLSVEDKNK PFPLLQNQAS
QRYVANSSLF VLDGQTPQSL DFDFTSEKEY YELKPDQNQL IVTLNGKSED GLDVKKEFVF
TKGSYLIEVN YKIANIGNSL WKGYFNTQLL RSSPKEDKSS IFHIGSYTGA SFSNPGKNRY
QKVSFSDMSK SNLDVDAKGG WIAMQQHYFL SAWVPNADSE NKFYTLATDK DYTIGAVSQP
ITVKPKEDKI VGSKLYIGPE ITSVLKGISP SLDLTVDYGI LWFLSSLLFS LMKAIYTVVG
NWGWSIVLVT VLIKLAFYRL SATSYKSMAS MRKLQPKLQA LRERYGDDKA KISQATMELY
KQEKVNPLGG CLPILIQIPV FIALYWVLLE SVELRQAPFI FWINDLASAD PYHVLPLIMG
ATMLIQQKLN PAPADPMQAK VMMFLPILFT GLFWNFPSGL VLYWIVNNTL SILQQWYITR
KYSDEKPAKK VVATAK
|
|---|
| |