| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl2081 |
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| Symbol | sdeC |
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| ID | 3114503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006369 |
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| Strand | + |
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| Start bp | 2345151 |
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| End bp | 2349755 |
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| Gene Length | 4605 bp |
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| Protein Length | 1534 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637583854 |
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| Product | SdeC protein, substrate of the Dot/Icm system |
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| Protein accession | YP_127416 |
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| Protein GI | 54295001 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAT ACGTAGAAGG GGTAGAATTA ACTCAAGAAG GTATGCATGC TATTTTTGCA
CGGATGGGAC ATGGCGATAT CACCAGCGGT AGCATTTATA ATGGAGTACC GACTATTGAC
ACAGAAGCCC TGAACAGGCA AGGCTTCATG CCCATTTTAA CAGGAGTAGG CCCTAAAAGA
GACTCCGGTC ACTGGATCAT GTTAATCAAA GGGCCTGGTA ACCAATATTT TCTCTTTGAC
CCACTGGGTA AAACATCAGG CGAAGGCTAT AAAAATACTT TATTAGCCCA ATTACCCATA
GCCTCTACTC TTTCTGTTAT TCCCAATGAC CCCGGATTAA ACAGGGGACT CTGCGGCTAT
TGGGTTGCTT CTGTTGGGCT AAAAGCTCGT GCTGAACTGA ACAAAGACAA TCCTCCCAAT
TTAGAAACCT TGGGTCAAAT CACAACGGAT GCAATGAAGG ATGAATTAAC CGATAATGGT
TATCCGAAAA TTACAGGCTG GCTAAAAGCC GTCGCTGATA AATTTCCAGA AGGCGATCCC
CAACCCGATG CGAAAGCATT AAGACAAACC ACTGAAAAAG ATTTGCACAT AGAGCTACCC
TCCCCTGTTT CTTCCGTGAA AGACACAGCT CCAAAGGAAG TCTCTACAAA ACCTACTGCA
CCACAAGTAG CCCTCAAACA TTCCTTAGAC AGTAAATTAT TAGAGAATGA CGAAGATGTT
CTAGACACCA TAAAGTATGT TCATAAAGAA TATTTAGGAA AACCGTATCC TGGCCCATTA
AAAAATCCAA AAGCACCGGA AGAAGGACGA CTTCCTCCAA GTGAAGGGCC CGATCGAGGA
CCTCATGGTC TTGCTCATAC GTTACGAACA ATGGCTTGTG CCGAAGTGAT GATAGAAGAA
GCACGAAAAG CCAAACTGAG AGGAGAGACG TTAGGCAAAG CACAAAATGG TCAGACTTTA
GCTGATGTAA CACCAGAAGA ACTGAAAAAA ATTCTCATCG CACAAGCTTT TTTTGTGGTA
GGAAGAGATG ATGAACGTTC AGGCTATGAT GACGTACACA AGAGAAATTT TTACGCGGAA
TATCATGAGC AAAGTGAGCA AGCGTTCAGG AAATACGTTG AAGATAACAA GCTAATCGGC
AAAATATTTA AAGATCAAAA AGAAGTCGAT TTCTATGCTG CGATTATTCT GGATAAAAAT
CATGAATGGG ATGCCACCCC GGCACATATC CTGATAAATC AAGGCCATAT GGTCGACTTA
ATGAGAACTA AAGCACCTGC CGAAGTCGCA TTGGAACGTA CCTACAATAC GCTTAAATAT
ACTTTAGGTT CGAAAGGTGC TGAAGTCGTC CTCAAGGCCC ATCGAGATTT TTTCTTTGCT
ACAGGCGCTG TTGTTCCCTT AGTTAACCCT GAAGCAATCG ATGATCCCAG CAGAGGAGGA
CCTTATGAAA ATCCCTTTAA TGGCGAGAAA TACGTTATTG TAGAGGGTAA GGAACCAAAA
TCTACAAAAG ACTTACCCAA ACCTGTAGGT CGCAACTATC AACTGAAAGA CAACGAACGA
TTCCTAACTA TAAAGGAATA TTACGCTTTT CCTGATGTGC AGCAAACCTA CCCTGGTTAC
AAAACGCGTT TGGAAGGAAG CTCTTACTAT TTCCCAACAC CATTTGCAGG AGAATGTGAA
CAAAACCCTG CAAAATGCCT GGGGGCTATC CAAAAAGCCC GTTCAAAACT ACAAACGGAT
GCCATTAAAA ATGGCTTTCA ATCCAGCTCT GATAAAGAGA GAAGACAACC CAATATGGAT
GAAATTGCGG CCGCCCGCAT CATTCAGCAA ATCATGGCCA ATCCTGATTG CATCCATGAC
GATCATGTGT CCATTAATGG CCAGAAACTG GAAGAAAAAT TCTTCCGTGA CTTGTTAGCC
AAATGCGATA TGGCTGTTGT AGGCTCGCTG CTCAATGACA CCGACGTCAA GAATATAGAT
ACTTTAATGC GACATGAGAA AGACACCGAG TTTCATTCGA CAGATCCTCA AGCAGTTCCA
GTGAAAATTG GGGACGCCTG GGAAAATAGA ATAAGAACGA AAGGTGGCAA CGTCACTCAA
ATGAAGCATG ATTTAATTTT CCTCATGCAA AATGACGCCT GGTATTTTAG CCGAGTCAAC
GCCATCGCAC AAAACCGGGA TAAAGGCTCC AATTTCAAAG AAGTGCTGTT TACCGCCTTA
ATGACGCCAT TGACTAATAA ATCATTAATG GATACATCTC ACGTCCCAGC TCCGAAAAAA
CTGTATCGTG GATTAAATCT GCCACAAGAA TTTACCAATA AATTAATCAA TCAATCCAAT
GTCATTATTG CTAATACAGA AAATACGCTG TTTACTGATC TCTCTGCTGA AACCTTCAAA
CAAATCAAGT TAAATGATTT TAGCCAAATG TCTGGCAAAA CCTGTGCCAG CACAACCAAA
AATATGAAAC TTTTAACCGA TATATGGGGC TCCAATGTCA TTTTTGAAAT GCTTGACCCG
GATGGTTTAC TGCATCCAAA ACAAGTAGGA ACCCATATGA CTGGGTCAGA AGATGAATTT
TCCGTTTATT TGCCGGAAGA TGTCGCTTTA GTTCCAACCA AGGTAACTCT TGAAGGAAAA
ACAGACACAG GAGAAGATCG GTATATCTTT ACACTGGTCG CCGTAAAAAG CCCTGACTTT
ATACCACGAC ATGAAAGTGG CTATGCGGTT GAGCCCTTCA TGAAAATGCA AAAAGAGAAA
GTCACTCAGG CATTGGATGC CATTGAAAAG GAGAAAGGCA GCTATAACAT CGACGAACAA
CTAAAAAATC TAAGAACAGA AATGGTCAGG CAAGCCAAAT TGCCTCTTAG AGAAGGAGTT
TTTGATAGGC TCTCTCATCG CCTTTCTCTG GAAACCAGTG ATAACAAAAT ATCTCCGGAA
CGCAGAGATT TTCTTAACCA GCACGTCATC CCTGTCTTAC AGGAATGCCA TATCGCACTT
AGAACAAACG ATATGGAGAT GATGCAAAAT GCTTTGGCAA AATTCCCTAC CGATAAGCAA
TGGTCTGCTT TTAAATCAGG GGAAGCAGTC AGAGCCAAAG CTCAAATGGA TGTATTAAAG
CAACAGATTG AAAAGACAAT CATGCTGCAA AGCCAGATTA TCCCGGCCCT CACGGAATGT
GGTGAAGCAC TGGATAAACA AAATGCCACA GAAGCATTGC AAGCGCTCAA TAAATTGCCT
ACAGAAAAAG AAATTGCTAA AGCAAAGGGA ATAGGACAAG AGTTAAGAGG GCAAATCACG
GGTGTCAAGC AAGAGCTAAC TGGAAATCTT GAGCCCCTGC AACGCGCAGT CACTACCCCT
GTTGTAAAAG ATGCTGAGAA AATGAGGGTA CGGTATGAAA CCCTTGTCAC AGACGTAACC
AAACGAGTCA CCGACTTTGA AAAAATCAAA CCGGCCAATC TTGAAAGTTA TAACAAAGCC
ATTGCCGATT TAAATAACAT ACAACAAGAA TTAAACCTTC TGCGTAATGA AAAAATTCGC
ATGCATACAG ATAAAGACAA AGCAGTGGAC TTTTCTGACA TAGAAGCATT GGAGAAACGA
TTACAAGATA CTCAACCCAA ATTGTTAACT CAACTTTTTG AGCAAACGTC CAAAGATATC
GCAAAGGTAA AAATACCAGA GAAACTAACC TTTACAATTA TCAAGTCAAT GACATCCAAA
ATTAAAGAGC AAATGGATAT ATTAGAGTTG GTTCGTAATG AAAGAATAAA ACAACATGGA
ACATCCACGG AACCTCTCGA TATGTCTGAT TTGGATAAAT TAAAAGGTCA ATTACAAACA
TTGAGTCAAT ACTTGGTTGA TGATTTGTTG GAAGACATTA AAGACTCTTT GAGTAATATC
AAAGACATCG CTACTTTTGA GGAAGAATCA AAATACATTG AAAAATGTCT TGATCATTTG
ACAGGGCTTG AACAAACGTT GGATGGCTCA GAAAAAGCAA TAAAGCAAAA AGAAGACATC
AGCACTTATA GAAAAGCCTT AATAGATAAA CAGGAAAAAG CCTATCCAGA AATAGTGCAA
CTGCAATATA AGAGTGAAGG GCTAATCATG CAATTACGTG ATTTATGTAA TGTTCATCAT
GAAAATTTAG CCGAAGCAAG AAAAGTGAGA CTTCAACAAC TGGATAATCA AAATAGCGGA
GGAGGGCTCC TGGGTGGGTT ATGGACCGTT ACCAATACCC TGGGTCTTAC TACAGATACT
GTACATGTTG AAAAAATGCA GATAAGAATG AAAGAACAGG TTCTTAGAGG ATTTAAGACT
GGTCTCAACA ATGACAAACA AGATGCAAAT CAAATCATTG CCTTCTTAGC TAAGAAAAAA
CCATCGGAGT TGGAAGAAGG TTTAGGCATA TCTAAAGAGA ATGCAAAGGA GTTGCATGAG
CTACTACAGC AACTGGACTC TAAAACTGCC TCAATAGATA AATTGCAGGA AAATGCAAGA
TTAATTGACG AAATCTCAAC TAAAATAGGC AAGGAACCAG TAAAACAAGA TCATACCATC
ACAATGGTTG AGGAAGAAAG TGATGATATA AGGTATGGTC TATAA
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| Protein sequence | MPKYVEGVEL TQEGMHAIFA RMGHGDITSG SIYNGVPTID TEALNRQGFM PILTGVGPKR
DSGHWIMLIK GPGNQYFLFD PLGKTSGEGY KNTLLAQLPI ASTLSVIPND PGLNRGLCGY
WVASVGLKAR AELNKDNPPN LETLGQITTD AMKDELTDNG YPKITGWLKA VADKFPEGDP
QPDAKALRQT TEKDLHIELP SPVSSVKDTA PKEVSTKPTA PQVALKHSLD SKLLENDEDV
LDTIKYVHKE YLGKPYPGPL KNPKAPEEGR LPPSEGPDRG PHGLAHTLRT MACAEVMIEE
ARKAKLRGET LGKAQNGQTL ADVTPEELKK ILIAQAFFVV GRDDERSGYD DVHKRNFYAE
YHEQSEQAFR KYVEDNKLIG KIFKDQKEVD FYAAIILDKN HEWDATPAHI LINQGHMVDL
MRTKAPAEVA LERTYNTLKY TLGSKGAEVV LKAHRDFFFA TGAVVPLVNP EAIDDPSRGG
PYENPFNGEK YVIVEGKEPK STKDLPKPVG RNYQLKDNER FLTIKEYYAF PDVQQTYPGY
KTRLEGSSYY FPTPFAGECE QNPAKCLGAI QKARSKLQTD AIKNGFQSSS DKERRQPNMD
EIAAARIIQQ IMANPDCIHD DHVSINGQKL EEKFFRDLLA KCDMAVVGSL LNDTDVKNID
TLMRHEKDTE FHSTDPQAVP VKIGDAWENR IRTKGGNVTQ MKHDLIFLMQ NDAWYFSRVN
AIAQNRDKGS NFKEVLFTAL MTPLTNKSLM DTSHVPAPKK LYRGLNLPQE FTNKLINQSN
VIIANTENTL FTDLSAETFK QIKLNDFSQM SGKTCASTTK NMKLLTDIWG SNVIFEMLDP
DGLLHPKQVG THMTGSEDEF SVYLPEDVAL VPTKVTLEGK TDTGEDRYIF TLVAVKSPDF
IPRHESGYAV EPFMKMQKEK VTQALDAIEK EKGSYNIDEQ LKNLRTEMVR QAKLPLREGV
FDRLSHRLSL ETSDNKISPE RRDFLNQHVI PVLQECHIAL RTNDMEMMQN ALAKFPTDKQ
WSAFKSGEAV RAKAQMDVLK QQIEKTIMLQ SQIIPALTEC GEALDKQNAT EALQALNKLP
TEKEIAKAKG IGQELRGQIT GVKQELTGNL EPLQRAVTTP VVKDAEKMRV RYETLVTDVT
KRVTDFEKIK PANLESYNKA IADLNNIQQE LNLLRNEKIR MHTDKDKAVD FSDIEALEKR
LQDTQPKLLT QLFEQTSKDI AKVKIPEKLT FTIIKSMTSK IKEQMDILEL VRNERIKQHG
TSTEPLDMSD LDKLKGQLQT LSQYLVDDLL EDIKDSLSNI KDIATFEEES KYIEKCLDHL
TGLEQTLDGS EKAIKQKEDI STYRKALIDK QEKAYPEIVQ LQYKSEGLIM QLRDLCNVHH
ENLAEARKVR LQQLDNQNSG GGLLGGLWTV TNTLGLTTDT VHVEKMQIRM KEQVLRGFKT
GLNNDKQDAN QIIAFLAKKK PSELEEGLGI SKENAKELHE LLQQLDSKTA SIDKLQENAR
LIDEISTKIG KEPVKQDHTI TMVEEESDDI RYGL
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